; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0013250 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013250
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr04:11230432..11230767
RNA-Seq ExpressionIVF0013250
SyntenyIVF0013250
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031930.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]4.24e-0471.43Show/hide
Query:  CP--YVDAGMATADAAPPRQRRPMAGRARGTQKKNGRGRLSL
        CP  YVDA   T DAA  RQRRPMA RARGTQKK+GR RL L
Subjt:  CP--YVDAGMATADAAPPRQRRPMAGRARGTQKKNGRGRLSL

KAA0066232.1 transposase [Cucumis melo var. makuwa]3.70e-1197.06Show/hide
Query:  MACPYVDAGMATADAAPPRQRRPMAGRARGTQKK
        MACPYVDAGMATADAAPPRQRRPMAGRARGT+KK
Subjt:  MACPYVDAGMATADAAPPRQRRPMAGRARGTQKK

KAA0067956.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]8.48e-1284.09Show/hide
Query:  MACP--YVDAGMATADAAPPRQRRPMAGRARGTQKKNGRGRLSL
        MACP  YVDA   TADA PPRQ+RPMAGRARGTQKKNGRGRLSL
Subjt:  MACP--YVDAGMATADAAPPRQRRPMAGRARGTQKKNGRGRLSL

TYK17960.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]5.25e-0573.68Show/hide
Query:  YVDAGMATADAAPPRQRRPMAGRARGTQKKNGRGRLSL
        YVDA   T D   PRQRRPMAGRARGTQKK+GR RL L
Subjt:  YVDAGMATADAAPPRQRRPMAGRARGTQKKNGRGRLSL

TrEMBL top hitse value%identityAlignment
A0A5A7VD11 Transposase1.5e-0897.06Show/hide
Query:  MACPYVDAGMATADAAPPRQRRPMAGRARGTQKK
        MACPYVDAGMATADAAPPRQRRPMAGRARGT+KK
Subjt:  MACPYVDAGMATADAAPPRQRRPMAGRARGTQKK

A0A5A7VN13 NBS-LRR type resistance protein5.1e-0984.09Show/hide
Query:  MACP--YVDAGMATADAAPPRQRRPMAGRARGTQKKNGRGRLSL
        MACP  YVDA   TADA PPRQ+RPMAGRARGTQKKNGRGRLSL
Subjt:  MACP--YVDAGMATADAAPPRQRRPMAGRARGTQKKNGRGRLSL

A0A5D3D2P4 Retrovirus-related Pol polyprotein from transposon TNT 1-944.9e-0473.68Show/hide
Query:  YVDAGMATADAAPPRQRRPMAGRARGTQKKNGRGRLSL
        YVDA   T D   PRQRRPMAGRARGTQKK+GR RL L
Subjt:  YVDAGMATADAAPPRQRRPMAGRARGTQKKNGRGRLSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGCCCTTACGTCGATGCTGGTATGGCGACAGCCGACGCCGCACCACCGAGGCAGAGACGGCCGATGGCTGGCCGTGCACGCGGAACCCAGAAGAAGAACGGTCG
GGGACGGCTGTCGCTGTGGCTTCCCGTCGGTGAGGTGCGGATGGAGAAAAACGGGCGGTCGTCGAAGGCGTACGGATGGCGTCTGTGTTCGTCGGGTGAAGAAGCCGAAG
AGAAGAAGAAGAAGAAGAGATGGCGGCGGCGCTTCGTGAAGGCGGTGGAGAAGGAAGCCTCGGGGTCGTGCGGCGGCGCAAGGAAGAAAGCGAAAATGGATGGGCTTGCG
CGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGCCCTTACGTCGATGCTGGTATGGCGACAGCCGACGCCGCACCACCGAGGCAGAGACGGCCGATGGCTGGCCGTGCACGCGGAACCCAGAAGAAGAACGGTCG
GGGACGGCTGTCGCTGTGGCTTCCCGTCGGTGAGGTGCGGATGGAGAAAAACGGGCGGTCGTCGAAGGCGTACGGATGGCGTCTGTGTTCGTCGGGTGAAGAAGCCGAAG
AGAAGAAGAAGAAGAAGAGATGGCGGCGGCGCTTCGTGAAGGCGGTGGAGAAGGAAGCCTCGGGGTCGTGCGGCGGCGCAAGGAAGAAAGCGAAAATGGATGGGCTTGCG
CGGTAG
Protein sequenceShow/hide protein sequence
MACPYVDAGMATADAAPPRQRRPMAGRARGTQKKNGRGRLSLWLPVGEVRMEKNGRSSKAYGWRLCSSGEEAEEKKKKKRWRRRFVKAVEKEASGSCGGARKKAKMDGLA
R