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IVF0013260 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013260
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRING-CH-type domain-containing protein
Genome locationchr02:21629160..21629757
RNA-Seq ExpressionIVF0013260
SyntenyIVF0013260
Gene Ontology termsNA
InterPro domainsIPR038821 - CLE-related protein 45-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587538.1 hypothetical protein SDJN03_16103, partial [Cucurbita argyrosperma subsp. sororia]7.62e-3069.15Show/hide
Query:  SRKGLSFVLFVACFLLCFLQQPQTTANGLSTIDVALKWVAFKSTIINTHKADSSVKKLNLA----APSPAMNFDPNQSNKRGVKKGSDPIHNRS
        S K L F L +A   LC   QPQT A+GL+TID+ALKWVAFKS I NTH  DS VKKL +     APSPAM+FDPNQSNKRGVKKGSDPIHNRS
Subjt:  SRKGLSFVLFVACFLLCFLQQPQTTANGLSTIDVALKWVAFKSTIINTHKADSSVKKLNLA----APSPAMNFDPNQSNKRGVKKGSDPIHNRS

KAG6589506.1 hypothetical protein SDJN03_14929, partial [Cucurbita argyrosperma subsp. sororia]6.80e-3470.41Show/hide
Query:  MGSLFSRKGLSFVLFVACFLLCFLQQPQTTANGLSTIDVALKWVAFKSTIINTHKADSSVKKLNL----AAPSPAMNFDPNQSNKRGVKKGSDPIHNR
        MG LF RK L F+  +A F+   LQ PQT A+GL+TIDVALKWVAFKS  I+THKAD S KKLN+     APSPAMNFDPNQSNKR VKKGSDPIHNR
Subjt:  MGSLFSRKGLSFVLFVACFLLCFLQQPQTTANGLSTIDVALKWVAFKSTIINTHKADSSVKKLNL----AAPSPAMNFDPNQSNKRGVKKGSDPIHNR

KGN63668.1 hypothetical protein Csa_014085 [Cucumis sativus]3.99e-4988.78Show/hide
Query:  MGSLFSRKGLSFVLFVACFLLCFL-QQPQTTANGLSTIDVALKWVAFKST-IINTHKADSSVKK-LNLAAPSPAMNFDPNQSNKRGVKKGSDPIHNRS
        MGSLFSRKGL FV  VACFLLC L QQPQTTANGLSTID ALKWVAFKST  INTHKADSS +K LNLAAPSPAMNFDPNQSNKRGVKKGSDPIHNRS
Subjt:  MGSLFSRKGLSFVLFVACFLLCFL-QQPQTTANGLSTIDVALKWVAFKST-IINTHKADSSVKK-LNLAAPSPAMNFDPNQSNKRGVKKGSDPIHNRS

OMP04794.1 hypothetical protein COLO4_09292 [Corchorus olitorius]1.25e-1247.19Show/hide
Query:  FVLFVACFLLCFLQQPQTTANGLSTIDVALKWVAFKSTIINTH---KADSSVKKLNLA---APSPAMNFDPNQSNKRGVKKGSDPIHNR
        F+L +AC  L  LQ      +GL +ID+AL+W       +      KAD++V  L      APSP+M FDPNQS+KR V+KGSDPIHNR
Subjt:  FVLFVACFLLCFLQQPQTTANGLSTIDVALKWVAFKSTIINTH---KADSSVKKLNLA---APSPAMNFDPNQSNKRGVKKGSDPIHNR

QHN98326.1 uncharacterized protein DS421_13g388610 [Arachis hypogaea]9.11e-1451.39Show/hide
Query:  LQQPQTTANGLSTIDVALKWVAFKSTIINTHKADSSVKKLNLAAPSPAMNFDPNQSNKRGVKKGSDPIHNRS
        L       +GL + D+ALKW   +S I+     +    KL++A P+P+M FDPNQSNKR VKKGSDPIHNRS
Subjt:  LQQPQTTANGLSTIDVALKWVAFKSTIINTHKADSSVKKLNLAAPSPAMNFDPNQSNKRGVKKGSDPIHNRS

TrEMBL top hitse value%identityAlignment
A0A0A0LPD5 Uncharacterized protein1.6e-3588.78Show/hide
Query:  MGSLFSRKGLSFVLFVACFLLCFL-QQPQTTANGLSTIDVALKWVAFKST-IINTHKADSS-VKKLNLAAPSPAMNFDPNQSNKRGVKKGSDPIHNRS
        MGSLFSRKGL FV  VACFLLC L QQPQTTANGLSTID ALKWVAFKST  INTHKADSS  K LNLAAPSPAMNFDPNQSNKRGVKKGSDPIHNRS
Subjt:  MGSLFSRKGLSFVLFVACFLLCFL-QQPQTTANGLSTIDVALKWVAFKST-IINTHKADSS-VKKLNLAAPSPAMNFDPNQSNKRGVKKGSDPIHNRS

A0A1R3KCL9 Uncharacterized protein6.3e-0847.19Show/hide
Query:  FVLFVACFLLCFLQQPQTTANGLSTIDVALKWVAFKSTIINTH---KADSSVKKLNL---AAPSPAMNFDPNQSNKRGVKKGSDPIHNR
        F+L +AC  L  LQ      +GL +ID+AL+W       +      KAD++V  L      APSP+M FDPNQS+KR V+KGSDPIHNR
Subjt:  FVLFVACFLLCFLQQPQTTANGLSTIDVALKWVAFKSTIINTH---KADSSVKKLNL---AAPSPAMNFDPNQSNKRGVKKGSDPIHNR

A0A314YU30 Uncharacterized protein9.1e-0745.05Show/hide
Query:  SFVLFVACFLLCFLQQPQTTANGLSTIDVALKW----VAFKST--IINTHKADSSVKKLNLAAPSPAMNFDPNQSNKRGVKKGSDPIHNRS
        S VLFV    + FL       +GL ++D+AL+W    ++F  +  ++     +    KL+L AP+P+M FDPNQSNKR V+KGSDPIHNRS
Subjt:  SFVLFVACFLLCFLQQPQTTANGLSTIDVALKW----VAFKST--IINTHKADSSVKKLNLAAPSPAMNFDPNQSNKRGVKKGSDPIHNRS

A0A445ABG3 Uncharacterized protein1.7e-0846.91Show/hide
Query:  FVACFLLCFLQQPQTTANGLSTIDVALKWVAFKSTIINTHKADSSVKKLNLAAPSPAMNFDPNQSNKRGVKKGSDPIHNRS
        F+   ++  L       +GL + D+ALKW   +S I+     +    KL++ AP+P+M FDPNQSNKR VKKGSDPIHNRS
Subjt:  FVACFLLCFLQQPQTTANGLSTIDVALKWVAFKSTIINTHKADSSVKKLNLAAPSPAMNFDPNQSNKRGVKKGSDPIHNRS

A0A7N2MQ95 Uncharacterized protein6.9e-0745.45Show/hide
Query:  VLFVACFLLCFLQQPQTTANGLSTIDVALKWVAFKS------TIINTHKADSSVKKLNLAAPSPAMNFDPNQSNKRGVKKGSDPIHNR
        V+ + C  L  LQ  +   +GL +ID+ALKW   +S       ++     D    KLNL AP+P++  DPNQSNKR V+KGSDPIHNR
Subjt:  VLFVACFLLCFLQQPQTTANGLSTIDVALKWVAFKS------TIINTHKADSSVKKLNLAAPSPAMNFDPNQSNKRGVKKGSDPIHNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCCTTGTTTAGCAGGAAAGGTTTGAGCTTTGTGTTGTTTGTAGCTTGTTTTTTGTTGTGTTTTCTTCAACAACCTCAAACAACGGCAAATGGGCTTAGCACAAT
TGATGTTGCTCTCAAATGGGTAGCTTTCAAATCCACAATTATCAACACCCACAAAGCTGATTCTTCTGTCAAAAAATTGAATTTAGCAGCTCCATCACCAGCCATGAACT
TTGACCCAAATCAATCCAACAAAAGAGGAGTCAAGAAAGGATCTGATCCAATCCACAACAGATCTTAA
mRNA sequenceShow/hide mRNA sequence
AAATGGGTTCCTTGTTTAGCAGGAAAGGTTTGAGCTTTGTGTTGTTTGTAGCTTGTTTTTTGTTGTGTTTTCTTCAACAACCTCAAACAACGGCAAATGGGCTTAGCACA
ATTGATGTTGCTCTCAAATGGGTAGCTTTCAAATCCACAATTATCAACACCCACAAAGCTGATTCTTCTGTCAAAAAATTGAATTTAGCAGCTCCATCACCAGCCATGAA
CTTTGACCCAAATCAATCCAACAAAAGAGGAGTCAAGAAAGGATCTGATCCAATCCACAACAGATCTTAACAAAGGAAAGCTCGTCAAGAGATGAAGAAAAAAAAAAAAC
TCTCATTTCATTTGGTACTTTTCATTAGTTTCTTCAAAAAGGGTTGGTTGAATATTGGAAATTTCTCCCATATATTTTATATATATAATTCTCTATCTTGGGTTTGTTTA
AAGTTTAAATCAAGTAGATGAAAAAGGTTATTGTATAGTTTTCAAAGATTTTCAGATGAAACTTTGTAGTAGAGAGTAATGTTTATTTATTTTATACAATTTTGGTCCTC
TGTTTCATCTTACATATAGAGAAAAATCTTTGGGTTGTTAGTTCTGAG
Protein sequenceShow/hide protein sequence
MGSLFSRKGLSFVLFVACFLLCFLQQPQTTANGLSTIDVALKWVAFKSTIINTHKADSSVKKLNLAAPSPAMNFDPNQSNKRGVKKGSDPIHNRS