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IVF0013275 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013275
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionFom-2 protein
Genome locationchr11:6812344..6814067
RNA-Seq ExpressionIVF0013275
SyntenyIVF0013275
Gene Ontology termsNA
InterPro domainsIPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAT77094.1 Fom-2 protein, partial [Cucumis melo]7.78e-4945.73Show/hide
Query:  RRLPNNIFVENLREICLSYCNSCEKLPMLGQLNNLKKLHIVGFQGVQIMDNEFFG---------------------------------------------
        RRLPN IFVENL EI L  C++CEKLPMLGQLNNLKKL I  F GVQI+DN+F+G                                             
Subjt:  RRLPNNIFVENLREICLSYCNSCEKLPMLGQLNNLKKLHIVGFQGVQIMDNEFFG---------------------------------------------

Query:  ------------------------------------------------IGPLEKLPEGLCHLMNLRRTRIVGNMQNYDFDFLHYLPSLKQITLVEDELGD
                                                        IGPL+KLPE LCHLMNL    IVGN+QNYDF  L +LPSLK+ITLVEDEL +
Subjt:  ------------------------------------------------IGPLEKLPEGLCHLMNLRRTRIVGNMQNYDFDFLHYLPSLKQITLVEDELGD

Query:  NRVEQIPQQLQHLTALESLCIENFGGIIEALPEW
        N V QIPQQLQHLT+LE L IENFGGI EALPEW
Subjt:  NRVEQIPQQLQHLTALESLCIENFGGIIEALPEW

AAT77098.1 Fom-2 protein, partial [Cucumis melo]1.10e-4838.32Show/hide
Query:  RRLPNNIFVENLREICLSYCNSCEKLPMLGQLNNLKKLHIVGFQGVQIMDNEFFG---------------------------------------------
        R LPN IFVENLRE+ L  CN+CE LPMLGQLNNLKKL I  FQ +QI+DNEF+G                                             
Subjt:  RRLPNNIFVENLREICLSYCNSCEKLPMLGQLNNLKKLHIVGFQGVQIMDNEFFG---------------------------------------------

Query:  -----------------------------------------------------------------------IGPLEKLPEGLCHLMNLRRTRIVGNMQNY
                                                                               IGPLEKLPE LCHLM LR  +IVGNMQNY
Subjt:  -----------------------------------------------------------------------IGPLEKLPEGLCHLMNLRRTRIVGNMQNY

Query:  DFDFLHYLPSLKQITLVEDELGDNRVEQIPQQLQHLTALESLCIENFGGIIEALPEW-------------------------------------------
        DF  L +LPSLKQITLVEDEL +N V QIPQQLQHLTALE L IENFGGI EALPEW                                           
Subjt:  DFDFLHYLPSLKQITLVEDELGDNRVEQIPQQLQHLTALESLCIENFGGIIEALPEW-------------------------------------------

Query:  ------DMERAKLSHLPQIQI
              DME AKLSHLPQI I
Subjt:  ------DMERAKLSHLPQIQI

QDF82816.1 Fom-2 protein, partial [Cucumis melo var. cantalupo]2.85e-4945.3Show/hide
Query:  RRLPNNIFVENLREICLSYCNSCEKLPMLGQLNNLKKLHIVGFQGVQIMDNEFFG---------------------------------------------
        RRLPN IFVENL EI L  C++CEKLPMLGQLNNLKKL I  F GVQI+DNEF+G                                             
Subjt:  RRLPNNIFVENLREICLSYCNSCEKLPMLGQLNNLKKLHIVGFQGVQIMDNEFFG---------------------------------------------

Query:  ------------------------------------------------IGPLEKLPEGLCHLMNLRRTRIVGNMQNYDFDFLHYLPSLKQITLVEDELGD
                                                        IGPL+KLPE LCHLMNL    IVGN+QNYDF  L +LPSLK+ITLVE +L +
Subjt:  ------------------------------------------------IGPLEKLPEGLCHLMNLRRTRIVGNMQNYDFDFLHYLPSLKQITLVEDELGD

Query:  NRVEQIPQQLQHLTALESLCIENFGGIIEALPEW
        N V+QIPQQLQHLT+LE L IENFGGI EALPEW
Subjt:  NRVEQIPQQLQHLTALESLCIENFGGIIEALPEW

QDF82817.1 Fom-2 protein, partial [Cucumis melo var. cantalupo]5.14e-5045.73Show/hide
Query:  RRLPNNIFVENLREICLSYCNSCEKLPMLGQLNNLKKLHIVGFQGVQIMDNEFFG---------------------------------------------
        RRLPN IFVENL EI L  C++CEKLPMLGQLNNLKKL I  F GVQI+DN+F+G                                             
Subjt:  RRLPNNIFVENLREICLSYCNSCEKLPMLGQLNNLKKLHIVGFQGVQIMDNEFFG---------------------------------------------

Query:  ------------------------------------------------IGPLEKLPEGLCHLMNLRRTRIVGNMQNYDFDFLHYLPSLKQITLVEDELGD
                                                        IGPL+KLPE LCHLMNL    IVGN+QNYDF  L +LPSLK+ITLVEDEL +
Subjt:  ------------------------------------------------IGPLEKLPEGLCHLMNLRRTRIVGNMQNYDFDFLHYLPSLKQITLVEDELGD

Query:  NRVEQIPQQLQHLTALESLCIENFGGIIEALPEW
        N V QIPQQLQHLT+LE L IENFGGI EALPEW
Subjt:  NRVEQIPQQLQHLTALESLCIENFGGIIEALPEW

QDF82818.1 Fom-2 protein, partial [Cucumis melo var. cantalupo]5.14e-5045.73Show/hide
Query:  RRLPNNIFVENLREICLSYCNSCEKLPMLGQLNNLKKLHIVGFQGVQIMDNEFFG---------------------------------------------
        RRLPN IFVENL EI L  C++CEKLPMLGQLNNLKKL I  F GVQI+DN+F+G                                             
Subjt:  RRLPNNIFVENLREICLSYCNSCEKLPMLGQLNNLKKLHIVGFQGVQIMDNEFFG---------------------------------------------

Query:  ------------------------------------------------IGPLEKLPEGLCHLMNLRRTRIVGNMQNYDFDFLHYLPSLKQITLVEDELGD
                                                        IGPL+KLPE LCHLMNL    IVGN+QNYDF  L +LPSLK+ITLVEDEL +
Subjt:  ------------------------------------------------IGPLEKLPEGLCHLMNLRRTRIVGNMQNYDFDFLHYLPSLKQITLVEDELGD

Query:  NRVEQIPQQLQHLTALESLCIENFGGIIEALPEW
        N V QIPQQLQHLT+LE L IENFGGI EALPEW
Subjt:  NRVEQIPQQLQHLTALESLCIENFGGIIEALPEW

TrEMBL top hitse value%identityAlignment
A0A0A0LRE1 NB-ARC domain-containing protein3.3e-4046.15Show/hide
Query:  RRLPNNIFVENLREICLSYCNSCEKLPMLGQLNNLKKLHIVGFQGVQIMDNEFFG---------------------------------------------
        RRLPN IFVENL  I L  CN+CEKLPMLGQLNNLKKL I  F GVQI+DNEF+G                                             
Subjt:  RRLPNNIFVENLREICLSYCNSCEKLPMLGQLNNLKKLHIVGFQGVQIMDNEFFG---------------------------------------------

Query:  ------------------------------------------------IGPLEKLPEGLCHLMNLRRTRIVGNMQNYDFDFLHYLPSLKQITLVEDELGD
                                                        IGPL+KLPE LCHLMNL   RIVGNMQNYDF  L +L SLK+ITLVEDEL +
Subjt:  ------------------------------------------------IGPLEKLPEGLCHLMNLRRTRIVGNMQNYDFDFLHYLPSLKQITLVEDELGD

Query:  NRVEQIPQQLQHLTALESLCIENFGGIIEALPEW
        N V QI +QLQHLTALE L IENFGG IEALPEW
Subjt:  NRVEQIPQQLQHLTALESLCIENFGGIIEALPEW

A0A4Y6JLT3 Fom-2 protein (Fragment)1.1e-4045.73Show/hide
Query:  RRLPNNIFVENLREICLSYCNSCEKLPMLGQLNNLKKLHIVGFQGVQIMDNEFFG---------------------------------------------
        RRLPN IFVENL EI L  C++CEKLPMLGQLNNLKKL I  F GVQI+DN+F+G                                             
Subjt:  RRLPNNIFVENLREICLSYCNSCEKLPMLGQLNNLKKLHIVGFQGVQIMDNEFFG---------------------------------------------

Query:  ------------------------------------------------IGPLEKLPEGLCHLMNLRRTRIVGNMQNYDFDFLHYLPSLKQITLVEDELGD
                                                        IGPL+KLPE LCHLMNL    IVGN+QNYDF  L +LPSLK+ITLVEDEL +
Subjt:  ------------------------------------------------IGPLEKLPEGLCHLMNLRRTRIVGNMQNYDFDFLHYLPSLKQITLVEDELGD

Query:  NRVEQIPQQLQHLTALESLCIENFGGIIEALPEW
        N V QIPQQLQHLT+LE L IENFGG IEALPEW
Subjt:  NRVEQIPQQLQHLTALESLCIENFGGIIEALPEW

A0A4Y6JLW0 Fom-2 protein (Fragment)1.1e-4045.73Show/hide
Query:  RRLPNNIFVENLREICLSYCNSCEKLPMLGQLNNLKKLHIVGFQGVQIMDNEFFG---------------------------------------------
        RRLPN IFVENL EI L  C++CEKLPMLGQLNNLKKL I  F GVQI+DN+F+G                                             
Subjt:  RRLPNNIFVENLREICLSYCNSCEKLPMLGQLNNLKKLHIVGFQGVQIMDNEFFG---------------------------------------------

Query:  ------------------------------------------------IGPLEKLPEGLCHLMNLRRTRIVGNMQNYDFDFLHYLPSLKQITLVEDELGD
                                                        IGPL+KLPE LCHLMNL    IVGN+QNYDF  L +LPSLK+ITLVEDEL +
Subjt:  ------------------------------------------------IGPLEKLPEGLCHLMNLRRTRIVGNMQNYDFDFLHYLPSLKQITLVEDELGD

Query:  NRVEQIPQQLQHLTALESLCIENFGGIIEALPEW
        N V QIPQQLQHLT+LE L IENFGG IEALPEW
Subjt:  NRVEQIPQQLQHLTALESLCIENFGGIIEALPEW

Q694W1 Fom-2 protein (Fragment)8.7e-4138.32Show/hide
Query:  RRLPNNIFVENLREICLSYCNSCEKLPMLGQLNNLKKLHIVGFQGVQIMDNEFFG---------------------------------------------
        R LPN IFVENLRE+ L  CN+CE LPMLGQLNNLKKL I  FQ +QI+DNEF+G                                             
Subjt:  RRLPNNIFVENLREICLSYCNSCEKLPMLGQLNNLKKLHIVGFQGVQIMDNEFFG---------------------------------------------

Query:  -----------------------------------------------------------------------IGPLEKLPEGLCHLMNLRRTRIVGNMQNY
                                                                               IGPLEKLPE LCHLM LR  +IVGNMQNY
Subjt:  -----------------------------------------------------------------------IGPLEKLPEGLCHLMNLRRTRIVGNMQNY

Query:  DFDFLHYLPSLKQITLVEDELGDNRVEQIPQQLQHLTALESLCIENFGGIIEALPEW-------------------------------------------
        DF  L +LPSLKQITLVEDEL +N V QIPQQLQHLTALE L IENFGG IEALPEW                                           
Subjt:  DFDFLHYLPSLKQITLVEDELGDNRVEQIPQQLQHLTALESLCIENFGGIIEALPEW-------------------------------------------

Query:  ------DMERAKLSHLPQIQI
              DME AKLSHLPQI I
Subjt:  ------DMERAKLSHLPQIQI

Q694W4 Fom-2 protein (Fragment)1.1e-4045.73Show/hide
Query:  RRLPNNIFVENLREICLSYCNSCEKLPMLGQLNNLKKLHIVGFQGVQIMDNEFFG---------------------------------------------
        RRLPN IFVENL EI L  C++CEKLPMLGQLNNLKKL I  F GVQI+DN+F+G                                             
Subjt:  RRLPNNIFVENLREICLSYCNSCEKLPMLGQLNNLKKLHIVGFQGVQIMDNEFFG---------------------------------------------

Query:  ------------------------------------------------IGPLEKLPEGLCHLMNLRRTRIVGNMQNYDFDFLHYLPSLKQITLVEDELGD
                                                        IGPL+KLPE LCHLMNL    IVGN+QNYDF  L +LPSLK+ITLVEDEL +
Subjt:  ------------------------------------------------IGPLEKLPEGLCHLMNLRRTRIVGNMQNYDFDFLHYLPSLKQITLVEDELGD

Query:  NRVEQIPQQLQHLTALESLCIENFGGIIEALPEW
        N V QIPQQLQHLT+LE L IENFGG IEALPEW
Subjt:  NRVEQIPQQLQHLTALESLCIENFGGIIEALPEW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATTTCAAGGGATCAAAATTTGCAACTACATCCTACAAATATATTGAGAAGGAACTTCAAAATAAGGAGATTCAAAATGTTGCAGGTAAGAAGACGTTTGCCTAA
CAATATTTTTGTTGAGAATTTAAGAGAGATATGTTTGTCTTATTGTAATAGTTGTGAAAAGCTTCCAATGCTTGGACAATTAAACAACCTAAAGAAACTTCATATTGTCG
GCTTTCAAGGTGTCCAAATTATGGACAACGAGTTTTTTGGCATTGGTCCGTTGGAGAAGCTGCCAGAAGGTTTATGTCATCTCATGAATTTGAGGAGAACGAGAATTGTT
GGAAATATGCAGAATTATGATTTTGACTTCCTTCATTACCTTCCTTCCCTTAAACAAATTACTTTAGTCGAGGATGAGTTGGGCGATAATAGAGTAGAACAAATTCCTCA
ACAACTTCAACACCTCACTGCCTTGGAATCTCTTTGCATTGAAAATTTTGGAGGCATTATTGAAGCTTTGCCAGAATGGGACATGGAGCGGGCAAAACTTTCCCACCTTC
CACAAATTCAGATTTCTCTTCATAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAATTTCAAGGGATCAAAATTTGCAACTACATCCTACAAATATATTGAGAAGGAACTTCAAAATAAGGAGATTCAAAATGTTGCAGGTAAGAAGACGTTTGCCTAA
CAATATTTTTGTTGAGAATTTAAGAGAGATATGTTTGTCTTATTGTAATAGTTGTGAAAAGCTTCCAATGCTTGGACAATTAAACAACCTAAAGAAACTTCATATTGTCG
GCTTTCAAGGTGTCCAAATTATGGACAACGAGTTTTTTGGCATTGGTCCGTTGGAGAAGCTGCCAGAAGGTTTATGTCATCTCATGAATTTGAGGAGAACGAGAATTGTT
GGAAATATGCAGAATTATGATTTTGACTTCCTTCATTACCTTCCTTCCCTTAAACAAATTACTTTAGTCGAGGATGAGTTGGGCGATAATAGAGTAGAACAAATTCCTCA
ACAACTTCAACACCTCACTGCCTTGGAATCTCTTTGCATTGAAAATTTTGGAGGCATTATTGAAGCTTTGCCAGAATGGGACATGGAGCGGGCAAAACTTTCCCACCTTC
CACAAATTCAGATTTCTCTTCATAAATAG
Protein sequenceShow/hide protein sequence
MAISRDQNLQLHPTNILRRNFKIRRFKMLQVRRRLPNNIFVENLREICLSYCNSCEKLPMLGQLNNLKKLHIVGFQGVQIMDNEFFGIGPLEKLPEGLCHLMNLRRTRIV
GNMQNYDFDFLHYLPSLKQITLVEDELGDNRVEQIPQQLQHLTALESLCIENFGGIIEALPEWDMERAKLSHLPQIQISLHK