; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0013277 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013277
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionU6 snRNA phosphodiesterase
Genome locationchr09:20382782..20385789
RNA-Seq ExpressionIVF0013277
SyntenyIVF0013277
Gene Ontology termsGO:0034477 - U6 snRNA 3'-end processing (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:1990838 - poly(U)-specific exoribonuclease activity, producing 3' uridine cyclic phosphate ends (molecular function)
InterPro domainsIPR027521 - U6 snRNA phosphodiesterase Usb1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143673.1 U6 snRNA phosphodiesterase [Cucumis sativus]1.02e-17287.2Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIP---------GGGL
        MDALRASYGGSSSDEEVDTVSP SASTS PQF DETV+ LPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIP            L
Subjt:  MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIP---------GGGL

Query:  VYEENFLTCACSPSGDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL
          ++           DIDIPLDVLCKDD KLEQA AREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL
Subjt:  VYEENFLTCACSPSGDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL

Query:  MEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE
        MEIRKQIQVVNEVYKLHNLPEFYKEARPHIS+AWALGDVSQ+SSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKF DE
Subjt:  MEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE

XP_008467330.1 PREDICTED: U6 snRNA phosphodiesterase [Cucumis melo]3.49e-18090.66Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIP---------GGGL
        MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIP            L
Subjt:  MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIP---------GGGL

Query:  VYEENFLTCACSPSGDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL
          ++           DIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL
Subjt:  VYEENFLTCACSPSGDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL

Query:  MEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE
        MEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE
Subjt:  MEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE

XP_022928923.1 U6 snRNA phosphodiesterase [Cucurbita moschata]6.58e-15178.01Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPSSASTST--PQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIP---------GG
        M+AL ASYGGSSSDE+VDTVSPSSAS S   PQ  DET S LPLPPPPLSLL+FPNST  LDDLPI QA RVRSFPHVQGNYALH+YIP           
Subjt:  MDALRASYGGSSSDEEVDTVSPSSASTST--PQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIP---------GG

Query:  GLVYEENFLTCACSPSGDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITG
         L  ++           DIDIPLD+LCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQS RRYWIDFSKWETFVNDDLSRTFLSMEII G
Subjt:  GLVYEENFLTCACSPSGDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITG

Query:  GLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE
        GLMEIRK IQVVNEVYKLHNLPEFYKE RPHISLAWALGD+S++ SQ+VH+E+K+S VKE  KR IFT KFNGIECKIGKKM+KICKF DE
Subjt:  GLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE

XP_023549871.1 U6 snRNA phosphodiesterase [Cucurbita pepo subsp. pepo]1.23e-15177.47Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPSSASTST----PQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIP---------
        M+AL ASYGGSSSDE+VDTVSPSSAS S     PQ  DET S LPLPPPPLSLL+FPNST  LDDLPI QA RVRSFPHVQGNYA+H+YIP         
Subjt:  MDALRASYGGSSSDEEVDTVSPSSASTST----PQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIP---------

Query:  GGGLVYEENFLTCACSPSGDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEII
           L  ++           DIDIPLD+LCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQS RRYWIDFSKWETFVNDDLSRTFLSMEII
Subjt:  GGGLVYEENFLTCACSPSGDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEII

Query:  TGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE
         GGLMEIRK IQVVNEVYKLHNLPEFYKE RPHISLAWALGD+S++ SQ+VH+E+K+S VKE  KRCIFT KFNGIECKIGKKM+KICKF DE
Subjt:  TGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE

XP_038875354.1 U6 snRNA phosphodiesterase isoform X1 [Benincasa hispida]5.61e-15981.79Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPSSASTS--TPQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALH----VYIPGGGLVYE
        MDALRASYGGSSSDEE DTVSPSSASTS  TPQ  DETVS LPLPPP  SLL+FPNST +LDDLPIDQATRVRSFPHVQGNYALH    VY+P  G    
Subjt:  MDALRASYGGSSSDEEVDTVSPSSASTS--TPQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALH----VYIPGGGLVYE

Query:  ENFLTCACS--PS---GDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITG
          FL    S  P+    DID+PLDVLCKDDHKLEQALAREFH+SLSRTVPIRVHQIDSIVTMLRQKLQS RRYWIDFSKWETFVNDDLSRTFLSMEIITG
Subjt:  ENFLTCACS--PS---GDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITG

Query:  GLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE
        GLMEIRKQIQ+VNEVYKLHNLPEFYKEARPHISLAWA+GD+S++ SQAVHNE+K SAV +  KRCIFTTKF GIECKIGKK+YKICKF DE
Subjt:  GLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE

TrEMBL top hitse value%identityAlignment
A0A0A0KPH5 U6 snRNA phosphodiesterase1.4e-13587.2Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIP---------GGGL
        MDALRASYGGSSSDEEVDTVSP SASTS PQF DETV+ LPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIP            L
Subjt:  MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIP---------GGGL

Query:  VYEENFLTCACSPSGDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL
          ++           DIDIPLDVLCKDD KLEQA AREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL
Subjt:  VYEENFLTCACSPSGDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL

Query:  MEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE
        MEIRKQIQVVNEVYKLHNLPEFYKEARPHIS+AWALGDVSQ+SSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKF DE
Subjt:  MEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE

A0A1S3CTB0 U6 snRNA phosphodiesterase2.8e-14190.66Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIP---------GGGL
        MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIP            L
Subjt:  MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIP---------GGGL

Query:  VYEENFLTCACSPSGDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL
          ++           DIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL
Subjt:  VYEENFLTCACSPSGDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL

Query:  MEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE
        MEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE
Subjt:  MEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE

A0A6J1DNL4 U6 snRNA phosphodiesterase9.9e-10270.99Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPGGGLVYEEN----
        MDAL+ASY GSSSDEE D VS + +  S P           LPPPPLSLL+FPNS   L DLPI Q TR RSFPHV+GNYALHVYIP    VY       
Subjt:  MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPGGGLVYEEN----

Query:  ----FLTCACS--PS---GDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEII
            FL    S  PS    DID+PL  LCKD+HKLEQALAREFHISLSRTVPIRVHQIDSIV+MLRQKLQ  RRYWIDFSKWETFVNDDLSRTFLSMEII
Subjt:  ----FLTCACS--PS---GDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEII

Query:  TGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE
         GGLMEIRKQIQVVNEVYK HNLPEFYKE RPHISLAWALGD+S++ S+ V +++KRS++  P KRCIFTTKF+GIECKIGKK YKICK  DE
Subjt:  TGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE

A0A6J1EQH7 U6 snRNA phosphodiesterase5.2e-11978.01Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPSSASTST--PQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIP---------GG
        M+AL ASYGGSSSDE+VDTVSPSSAS S   PQ  DET S LPLPPPPLSLL+FPNST  LDDLPI QA RVRSFPHVQGNYALH+YIP           
Subjt:  MDALRASYGGSSSDEEVDTVSPSSASTST--PQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIP---------GG

Query:  GLVYEENFLTCACSPSGDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITG
         L  ++           DIDIPLD+LCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQS RRYWIDFSKWETFVNDDLSRTFLSMEII G
Subjt:  GLVYEENFLTCACSPSGDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITG

Query:  GLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE
        GLMEIRK IQVVNEVYKLHNLPEFYKE RPHISLAWALGD+S++ SQ+VH+E+K+S VKE  KR IFT KFNGIECKIGKKM+KICKF DE
Subjt:  GLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE

A0A6J1HYN3 U6 snRNA phosphodiesterase5.8e-11876.09Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPSSASTST--------PQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIP-----
        M+AL ASYGGSSSDE+ DTVSPSSAS S         PQ  DET S LPLPPPPLSLL+FPNST  LDDLPI QA RVRSFPHVQGNYA+H+YIP     
Subjt:  MDALRASYGGSSSDEEVDTVSPSSASTST--------PQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIP-----

Query:  ----GGGLVYEENFLTCACSPSGDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLS
               L  ++           DIDIPLD+LCKDD KLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQS RRYWIDFSKWETFVNDDLSRTFLS
Subjt:  ----GGGLVYEENFLTCACSPSGDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLS

Query:  MEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE
        MEII GGLMEIRK+IQVVNEVYKLHNLPEFYKEARPHISLAWALGD+S++ SQ+VH+E+K+S VKE  KRCIFT KFNGIECKIGKKM+KICKF DE
Subjt:  MEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE

SwissProt top hitse value%identityAlignment
Q5I0I5 U6 snRNA phosphodiesterase8.2e-2128.47Show/hide
Query:  YGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLP----PPPLSLLN-FPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPGGGLVYEENFLTCAC
        Y  S S++E + V   +A  S P          PLP    P P S+LN FP++    +D       R+R+FPH +GN+A H+YIP     YE N      
Subjt:  YGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLP----PPPLSLLN-FPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPGGGLVYEENFLTCAC

Query:  SPSGDIDIPLDVLCKDDHKLEQALAR--EFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQV
            +    LDVL          L +  EFH+SLS++V +R H I   V +L+ ++ S +R++   ++ + + N + +RTF+ +E ++ G  +    +  
Subjt:  SPSGDIDIPLDVLCKDDHKLEQALAR--EFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQV

Query:  VNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKI
        V+ V K  +L  FY++   H+SLAW +GD           EL+    +      +       + CK G K + +
Subjt:  VNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKI

Q6DEF6 U6 snRNA phosphodiesterase2.2e-1829.12Show/hide
Query:  SYGGSSSDEEVDTVSPSSA-----STSTPQFFD------------ETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPGG
        +Y  SSS+EE  + S  S       T T +  D                 LPLP     +  F +S  +  D   +   R+RSF H +GN+A +V+ P  
Subjt:  SYGGSSSDEEVDTVSPSSA-----STSTPQFFD------------ETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPGG

Query:  GLVYEENFLTCACSPSGDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITG
            EE FL           +   +   + H +   ++ EFH+SLS+TV +R H I   V  +R  L   ++++    K + + N + +RTFL ME+ TG
Subjt:  GLVYEENFLTCACSPSGDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITG

Query:  --GLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMY
           L+E+ K   +V+E  K  NL  FY++   HISLAW +GD ++   +A   EL+                 N + CK G K++
Subjt:  --GLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMY

Q7ZYI9 U6 snRNA phosphodiesterase2.0e-1932.08Show/hide
Query:  PLPPPPLSLLNFPNSTCVLDDLPIDQAT----RVRSFPHVQGNYALHVYIPGGGLVYEENFLTCACSPSGDIDIPLDVLCKDDHKLEQALAREFHISLSR
        PLPPP   L  F +   +  D  +D+ T    R+RSF H +GN+A +VYIP      +E FL         +D  + V  ++   L +    EFHIS S+
Subjt:  PLPPPPLSLLNFPNSTCVLDDLPIDQAT----RVRSFPHVQGNYALHVYIPGGGLVYEENFLTCACSPSGDIDIPLDVLCKDDHKLEQALAREFHISLSR

Query:  TVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQ
        TV +R H I+  V  L+ KL    R+     + + + N + +RTFL +E ++ G+  + + +  V+   +  NL  FY+E   H+SLAW +GD  +    
Subjt:  TVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQ

Query:  AVHNELKRSAVKEPFKRCIFTTKFNG--IECKIGKKMYKI
        +   EL++  V + F+     T+FN   I CK G K + I
Subjt:  AVHNELKRSAVKEPFKRCIFTTKFNG--IECKIGKKMYKI

Q91W78 U6 snRNA phosphodiesterase5.7e-2229.56Show/hide
Query:  YGGSSSDEEVDTVSP--SSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPGGGLVYE--ENF--LTCA
        Y  S S++E + V+   S   T   +     V S  LP P   L  FP++    +D       R+R+FPH +GN+A H+YIP     YE  E+F  L  A
Subjt:  YGGSSSDEEVDTVSP--SSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPGGGLVYE--ENF--LTCA

Query:  CSPSGDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQVV
          P   + +P  VL +           EFH+SLS++V +R H I   V +L+ ++ S +R++   ++ + + N + +RTF+ +E ++ G  +    +  V
Subjt:  CSPSGDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQVV

Query:  NEVYKLHNLPEFYKEARPHISLAWALGDVS-QISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKI
        +   K  +L  FY++   HISLAW +GD S Q+  Q +  EL+    +      +     N + CK G K + +
Subjt:  NEVYKLHNLPEFYKEARPHISLAWALGDVS-QISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKI

Q9BQ65 U6 snRNA phosphodiesterase2.7e-1930.89Show/hide
Query:  PLP----PPPLSLLN-FPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPGGGLVYE--ENFLTCACSPSGDIDIPLDVLCKDDHKLEQALAR--EFH
        PLP    P P S+LN FP +    +D       RVR+FPH +GN+A HVY+P     YE  E FL             LDVL          L R   FH
Subjt:  PLP----PPPLSLLN-FPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPGGGLVYE--ENFLTCACSPSGDIDIPLDVLCKDDHKLEQALAR--EFH

Query:  ISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVS
        +SLS++V +R H I   V  L+ ++ S  R++   ++ + + N + +RTF+ +E +T G  +    +  V+ V +  NL  FY++   H+SLAW +GD  
Subjt:  ISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVS

Query:  -QISSQAVHNELKRSAVKEPFK--RCIFTTKFNGIECKIGKKMYKI
         Q+  Q +    +  A+ + F+    +       + CK G K + +
Subjt:  -QISSQAVHNELKRSAVKEPFK--RCIFTTKFNGIECKIGKKMYKI

Arabidopsis top hitse value%identityAlignment
AT5G51170.1 unknown protein5.6e-8155.02Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPGGGLVYEENFLTC
        M+ALRASYG SSSD + D +SP+S  T+     D    S+ LPPPPL+LL+   ST  LD    +   RVR+FPHV GNYALHVY+P       +  + C
Subjt:  MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPGGGLVYEENFLTC

Query:  ACSPSGDI---------DIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL
               +         D+PL +LCKDD K E+AL REFHISL R VP+RVHQI+S+++MLRQKLQ  +RY IDF+KWE FVNDD +R+FLS+EI T GL
Subjt:  ACSPSGDI---------DIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL

Query:  MEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE
         EI KQI  VNEVYKLHNLPEFYK+ RPHISL WALGD+      AV  EL++       +  IFT+KF GIECKIG K +KICK  DE
Subjt:  MEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE

AT5G51170.2 unknown protein1.7e-5050.48Show/hide
Query:  MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPGGGLVYEENFLTC
        M+ALRASYG SSSD + D +SP+S  T+     D    S+ LPPPPL+LL+   ST  LD    +   RVR+FPHV GNYALHVY+P       +  + C
Subjt:  MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPGGGLVYEENFLTC

Query:  ACSPSGDI---------DIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL
               +         D+PL +LCKDD K E+AL REFHISL R VP+RVHQI+S+++MLRQKLQ  +RY IDF+KWE FVNDD +R+FLS+EI T GL
Subjt:  ACSPSGDI---------DIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGL

Query:  MEIRKQIQVV
         E+  ++ ++
Subjt:  MEIRKQIQVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCTCTGAGGGCTTCGTATGGAGGAAGCTCGTCGGACGAAGAAGTGGATACAGTGTCCCCTTCGTCAGCATCCACATCAACACCACAATTCTTCGATGAGACTGT
GAGCTCTTTACCTCTGCCTCCACCGCCTCTCTCACTTCTCAATTTTCCAAATTCCACCTGTGTCTTGGATGACTTGCCAATCGATCAGGCGACTAGGGTTCGAAGCTTTC
CTCACGTTCAAGGAAACTATGCCCTACACGTCTATATCCCAGGAGGTGGCCTTGTTTATGAAGAAAATTTCCTCACTTGTGCCTGCTCTCCATCTGGTGATATTGACATT
CCATTGGACGTTTTATGTAAAGATGACCACAAACTTGAGCAAGCATTGGCTAGAGAATTTCACATAAGTTTGTCAAGAACAGTGCCAATCCGAGTGCACCAGATTGACTC
AATAGTGACAATGCTTCGCCAGAAGCTTCAGTCCCCAAGGCGATATTGGATTGATTTTAGTAAGTGGGAGACTTTTGTTAACGATGATCTTTCTCGAACCTTTTTGTCAA
TGGAAATTATTACTGGAGGGCTAATGGAGATCAGAAAACAAATCCAAGTTGTTAATGAGGTTTATAAGCTCCACAATCTTCCTGAATTTTACAAGGAAGCAAGACCGCAT
ATATCTCTTGCCTGGGCATTAGGTGACGTTAGTCAAATATCGAGTCAAGCAGTTCATAATGAATTAAAAAGGTCCGCAGTTAAGGAACCATTTAAGAGATGTATTTTCAC
CACCAAATTCAATGGCATCGAATGTAAGATTGGTAAAAAAATGTATAAAATATGTAAATTTGCTGACGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGCTCTGAGGGCTTCGTATGGAGGAAGCTCGTCGGACGAAGAAGTGGATACAGTGTCCCCTTCGTCAGCATCCACATCAACACCACAATTCTTCGATGAGACTGT
GAGCTCTTTACCTCTGCCTCCACCGCCTCTCTCACTTCTCAATTTTCCAAATTCCACCTGTGTCTTGGATGACTTGCCAATCGATCAGGCGACTAGGGTTCGAAGCTTTC
CTCACGTTCAAGGAAACTATGCCCTACACGTCTATATCCCAGGAGGTGGCCTTGTTTATGAAGAAAATTTCCTCACTTGTGCCTGCTCTCCATCTGGTGATATTGACATT
CCATTGGACGTTTTATGTAAAGATGACCACAAACTTGAGCAAGCATTGGCTAGAGAATTTCACATAAGTTTGTCAAGAACAGTGCCAATCCGAGTGCACCAGATTGACTC
AATAGTGACAATGCTTCGCCAGAAGCTTCAGTCCCCAAGGCGATATTGGATTGATTTTAGTAAGTGGGAGACTTTTGTTAACGATGATCTTTCTCGAACCTTTTTGTCAA
TGGAAATTATTACTGGAGGGCTAATGGAGATCAGAAAACAAATCCAAGTTGTTAATGAGGTTTATAAGCTCCACAATCTTCCTGAATTTTACAAGGAAGCAAGACCGCAT
ATATCTCTTGCCTGGGCATTAGGTGACGTTAGTCAAATATCGAGTCAAGCAGTTCATAATGAATTAAAAAGGTCCGCAGTTAAGGAACCATTTAAGAGATGTATTTTCAC
CACCAAATTCAATGGCATCGAATGTAAGATTGGTAAAAAAATGTATAAAATATGTAAATTTGCTGACGAATGA
Protein sequenceShow/hide protein sequence
MDALRASYGGSSSDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPGGGLVYEENFLTCACSPSGDIDI
PLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPH
ISLAWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIECKIGKKMYKICKFADE