; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0013332 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013332
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description60S ribosomal protein L22-2
Genome locationchr01:28858660..28860240
RNA-Seq ExpressionIVF0013332
SyntenyIVF0013332
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002671 - Ribosomal protein L22e
IPR038526 - Ribosomal protein L22e superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136027.1 60S ribosomal protein L22-2 [Cucumis sativus]1.97e-81100Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

XP_022953729.1 60S ribosomal protein L22-2-like [Cucurbita moschata]1.33e-7998.41Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASG PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

XP_022960081.1 60S ribosomal protein L22-2-like [Cucurbita moschata]1.62e-8099.21Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGGPKGKKKG TFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

XP_022991268.1 60S ribosomal protein L22-2-like [Cucurbita maxima]1.62e-8098.41Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYEL+YFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

XP_023548993.1 60S ribosomal protein L22-2-like [Cucurbita pepo subsp. pepo]5.65e-8199.21Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

TrEMBL top hitse value%identityAlignment
A0A0A0K637 Uncharacterized protein1.0e-61100Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

A0A1S3BRQ9 60S ribosomal protein L22-21.0e-61100Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

A0A5D3D2W6 60S ribosomal protein L22-2-like1.0e-61100Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

A0A6J1DLK6 60S ribosomal protein L22-21.0e-61100Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

A0A6J1JVR1 60S ribosomal protein L22-2-like5.0e-6198.41Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYEL+YFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

SwissProt top hitse value%identityAlignment
P47198 60S ribosomal protein L224.7e-3263.64Show/hide
Query:  ASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNK
        A GG K KK+ + F +DC  PVED IMD A+ E+FL ERIKV GKAG LG   VT+ R K+KITV S+  FSKRYLKYLTKKYLKK+N+RDWLRV+A++K
Subjt:  ASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNK

Query:  DRNVYELRYFNIAENEGEEED
        +   YELRYF I ++E EEED
Subjt:  DRNVYELRYFNIAENEGEEED

Q98TF8 60S ribosomal protein L228.0e-3263.11Show/hide
Query:  AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASN
        AA GG K KK+ + F +DC  PVED IMD A+ E+FL ERIKV GKAG LG   VT+ R K+KITV S+  FSKRYLKYLTKKYLKK+N+RDWLRV+A++
Subjt:  AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASN

Query:  KDRNVYELRYFNIAENEGEEED
        K+   YELRYF I ++E EEE+
Subjt:  KDRNVYELRYFNIAENEGEEED

Q9FE58 60S ribosomal protein L22-31.2e-5182.54Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AA+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV++TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IA+NKDRN+YELRYFNIAENE EEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

Q9M9W1 60S ribosomal protein L22-21.1e-5284.13Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT+TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IA+NKDRN+YELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

Q9SRX7 Putative 60S ribosomal protein L22-11.4e-4169.05Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        M+R  A S G   KKKGV+FVIDC+KPV+D I++IA+LEKFL ERIKV GKAGALG+SV++TR   KI VN++SNFSKRYLKYLTKKYLKK+N+RDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKD+NVYE+RYF I +     E+
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

Arabidopsis top hitse value%identityAlignment
AT1G02830.1 Ribosomal L22e protein family1.0e-4269.05Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        M+R  A S G   KKKGV+FVIDC+KPV+D I++IA+LEKFL ERIKV GKAGALG+SV++TR   KI VN++SNFSKRYLKYLTKKYLKK+N+RDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKD+NVYE+RYF I +     E+
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

AT3G05560.1 Ribosomal L22e protein family7.6e-5484.13Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT+TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IA+NKDRN+YELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

AT3G05560.2 Ribosomal L22e protein family7.6e-5484.13Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT+TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IA+NKDRN+YELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

AT3G05560.3 Ribosomal L22e protein family7.6e-5484.13Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT+TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IA+NKDRN+YELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

AT5G27770.1 Ribosomal L22e protein family8.4e-5382.54Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AA+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV++TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IA+NKDRN+YELRYFNIAENE EEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCGTGGAGCAGCCGCATCCGGTGGCCCTAAGGGGAAGAAGAAGGGTGTGACCTTCGTTATCGATTGCGCGAAGCCAGTTGAGGACAAGATCATGGACATCGCCTC
ATTGGAGAAATTTCTTCTCGAGAGGATCAAGGTCGGCGGTAAAGCTGGAGCACTTGGTGACTCTGTTACTGTCACTAGGGACAAGAACAAGATCACCGTCAACTCCGACA
GCAATTTCTCCAAGAGGTATCTCAAATATTTGACTAAGAAGTATTTGAAGAAACACAATGTTAGAGATTGGCTTCGGGTTATTGCTTCGAACAAGGACCGCAATGTCTAT
GAATTGAGATACTTCAACATTGCCGAGAATGAGGGTGAGGAAGAAGACTGA
mRNA sequenceShow/hide mRNA sequence
CACAAACTCAAAACCCTAAATTCAGCGCCGATTCTTCAATACATATCTGCAGGAAGTTAGGGCAAAGCAGAAGCAAAAATGAGCCGTGGAGCAGCCGCATCCGGTGGCCC
TAAGGGGAAGAAGAAGGGTGTGACCTTCGTTATCGATTGCGCGAAGCCAGTTGAGGACAAGATCATGGACATCGCCTCATTGGAGAAATTTCTTCTCGAGAGGATCAAGG
TCGGCGGTAAAGCTGGAGCACTTGGTGACTCTGTTACTGTCACTAGGGACAAGAACAAGATCACCGTCAACTCCGACAGCAATTTCTCCAAGAGGTATCTCAAATATTTG
ACTAAGAAGTATTTGAAGAAACACAATGTTAGAGATTGGCTTCGGGTTATTGCTTCGAACAAGGACCGCAATGTCTATGAATTGAGATACTTCAACATTGCCGAGAATGA
GGGTGAGGAAGAAGACTGAAGTTGAAGTCTTTATATTTTGGAAGCATTGTTTGCAGTAGGATTAGCTATATTTCCATACCTTATCTCGAAGCGTTTTCCATATAGAACAT
ATAGCAAGGGGATTGCCTGAGTTCTGAGATGATGCAACTCTTGTTTATTTCTGAAGTTTTAATATCTATAAATTTTGCTCTCGTAGCTCTCTTCTTTTGCTTGATTTGAA
GATAATTTTCTTACTATGAGAGTATTGGTCAGTTTGTACTTTGTTTGAGGAATTGGAATTGGCAGTTCTTCTGAGAAAGTTGAAACTGTCTGGTACTGTTTGCGGAAGAG
TTTGCAAACCTAATGGTTTACTTCAATGGAGGACATCAAATAAACTTAAATTCTTGAGAAAGAACTAAATTTTTTAGTCATTTTTCAAAAAAAGAAAATAATCC
Protein sequenceShow/hide protein sequence
MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVY
ELRYFNIAENEGEEED