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IVF0013338 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013338
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 4
Genome locationchr03:8625186..8625612
RNA-Seq ExpressionIVF0013338
SyntenyIVF0013338
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033561.1 uncharacterized protein E6C27_scaffold261G001160 [Cucumis melo var. makuwa]5.46e-5192.13Show/hide
Query:  MSTDCSIPKEIVHKARTNLEVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNSGTCTALEMNDSGHFKFCFMAFGASIEG
        MS DCSIPKEIVHKARTNL VNISY+KAWRAKEHMVKILHGDTVESYALIPRFFDKLV+SN  TCTALEM+DSGHFKFCFMAFGASIEG
Subjt:  MSTDCSIPKEIVHKARTNLEVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNSGTCTALEMNDSGHFKFCFMAFGASIEG

KAA0037812.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]1.52e-5192.13Show/hide
Query:  MSTDCSIPKEIVHKARTNLEVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNSGTCTALEMNDSGHFKFCFMAFGASIEG
        MST+ SIP EIVHKARTNL +NISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESN GTCTALEM+DSGHFKFCFMAFGASIEG
Subjt:  MSTDCSIPKEIVHKARTNLEVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNSGTCTALEMNDSGHFKFCFMAFGASIEG

KAA0052073.1 uncharacterized protein E6C27_scaffold578G00430 [Cucumis melo var. makuwa]5.21e-5289.89Show/hide
Query:  MSTDCSIPKEIVHKARTNLEVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNSGTCTALEMNDSGHFKFCFMAFGASIEG
        +STD SIP+EIVHKARTNL VNISYQKAWRAKEHMVKILHGDTVE+YALIPRFFDKLVESN GTCT LEM++SGHFKFCFMAFGASIEG
Subjt:  MSTDCSIPKEIVHKARTNLEVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNSGTCTALEMNDSGHFKFCFMAFGASIEG

TYK02872.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]1.63e-5292.13Show/hide
Query:  MSTDCSIPKEIVHKARTNLEVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNSGTCTALEMNDSGHFKFCFMAFGASIEG
        MST+ SIP EIVHKARTNL +NISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESN GTCTALEM+DSGHFKFCFMAFGASIEG
Subjt:  MSTDCSIPKEIVHKARTNLEVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNSGTCTALEMNDSGHFKFCFMAFGASIEG

TYK31656.1 MuDRA-like transposase [Cucumis melo var. makuwa]6.09e-5191.01Show/hide
Query:  MSTDCSIPKEIVHKARTNLEVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNSGTCTALEMNDSGHFKFCFMAFGASIEG
        MSTD  IPKEIVHKARTNL VNISYQKAWRAKE MVKILHGDTVESYALIPRFFDKLVESN GTCTALEM DS HFKFCFMAFG SIEG
Subjt:  MSTDCSIPKEIVHKARTNLEVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNSGTCTALEMNDSGHFKFCFMAFGASIEG

TrEMBL top hitse value%identityAlignment
A0A5A7SVW4 Uncharacterized protein7.6e-4092.13Show/hide
Query:  MSTDCSIPKEIVHKARTNLEVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNSGTCTALEMNDSGHFKFCFMAFGASIEG
        MS DCSIPKEIVHKARTNL VNISY+KAWRAKEHMVKILHGDTVESYALIPRFFDKLV+SN  TCTALEM+DSGHFKFCFMAFGASIEG
Subjt:  MSTDCSIPKEIVHKARTNLEVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNSGTCTALEMNDSGHFKFCFMAFGASIEG

A0A5A7T2W2 Protein FAR1-RELATED SEQUENCE 41.3e-3992.13Show/hide
Query:  MSTDCSIPKEIVHKARTNLEVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNSGTCTALEMNDSGHFKFCFMAFGASIEG
        MST+ SIP EIVHKARTNL +NISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESN GTCTALEM+DSGHFKFCFMAFGASIEG
Subjt:  MSTDCSIPKEIVHKARTNLEVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNSGTCTALEMNDSGHFKFCFMAFGASIEG

A0A5A7V7F3 Protein FAR1-RELATED SEQUENCE 42.2e-3992.13Show/hide
Query:  MSTDCSIPKEIVHKARTNLEVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNSGTCTALEMNDSGHFKFCFMAFGASIEG
        MSTD SIPKEIVHKARTNL VNISYQKAWRAKEHMVKILHGD  ESYALIPRFFDKLVESN GTCTALEM+DSGHFKFCFM FGASIEG
Subjt:  MSTDCSIPKEIVHKARTNLEVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNSGTCTALEMNDSGHFKFCFMAFGASIEG

A0A5D3B9S0 Uncharacterized protein7.6e-4092.13Show/hide
Query:  MSTDCSIPKEIVHKARTNLEVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNSGTCTALEMNDSGHFKFCFMAFGASIEG
        MS DCSIPKEIVHKARTNL VNISY+KAWRAKEHMVKILHGDTVESYALIPRFFDKLV+SN  TCTALEM+DSGHFKFCFMAFGASIEG
Subjt:  MSTDCSIPKEIVHKARTNLEVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNSGTCTALEMNDSGHFKFCFMAFGASIEG

A0A5D3BVN2 Protein FAR1-RELATED SEQUENCE 41.3e-3992.13Show/hide
Query:  MSTDCSIPKEIVHKARTNLEVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNSGTCTALEMNDSGHFKFCFMAFGASIEG
        MST+ SIP EIVHKARTNL +NISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESN GTCTALEM+DSGHFKFCFMAFGASIEG
Subjt:  MSTDCSIPKEIVHKARTNLEVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNSGTCTALEMNDSGHFKFCFMAFGASIEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACTGATTGTTCAATTCCTAAAGAAATTGTGCATAAGGCTCGTACAAATCTTGAAGTTAATATAAGTTACCAAAAGGCTTGGAGGGCGAAAGAACATATGGTAAA
GATATTACATGGTGACACAGTTGAATCGTATGCATTGATTCCAAGATTCTTTGATAAATTGGTTGAATCTAATTCAGGTACATGCACTGCTTTAGAAATGAATGATAGTG
GTCATTTCAAGTTTTGCTTTATGGCTTTTGGTGCATCAATTGAGGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTACTGATTGTTCAATTCCTAAAGAAATTGTGCATAAGGCTCGTACAAATCTTGAAGTTAATATAAGTTACCAAAAGGCTTGGAGGGCGAAAGAACATATGGTAAA
GATATTACATGGTGACACAGTTGAATCGTATGCATTGATTCCAAGATTCTTTGATAAATTGGTTGAATCTAATTCAGGTACATGCACTGCTTTAGAAATGAATGATAGTG
GTCATTTCAAGTTTTGCTTTATGGCTTTTGGTGCATCAATTGAGGGGTGA
Protein sequenceShow/hide protein sequence
MSTDCSIPKEIVHKARTNLEVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNSGTCTALEMNDSGHFKFCFMAFGASIEG