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IVF0013354 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013354
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionSH3 domain-containing protein
Genome locationchr12:20458844..20459625
RNA-Seq ExpressionIVF0013354
SyntenyIVF0013354
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057068.1 SH3 domain-containing protein [Cucumis melo var. makuwa]8.17e-10993.24Show/hide
Query:  MAKRKRLGRKGRMAHVYGRRGARLTARSDGSSRLGNGRATDSRGRARLGNKGAAHGSAEGSAHDSDGRARLAARTETARLMALKKISRRHGSDGSGSAHG
        MAKRKRLGRKGRMAHVYGRRGARLTARSDGSSRLGNGRATDSRGRARLGNKGAAHGSAEGSAHDSDGRARLAARTETARLMALKKISRRHGSDGSGSAHG
Subjt:  MAKRKRLGRKGRMAHVYGRRGARLTARSDGSSRLGNGRATDSRGRARLGNKGAAHGSAEGSAHDSDGRARLAARTETARLMALKKISRRHGSDGSGSAHG

Query:  SNRRGSAHSSVGKGSASGLDVKGSASGSNGRGSDRPEAARARLKARLKRARLAARPEVARLAARVEGARLEARTDGGSACGRLKARLTARMERSRLAAPM
        SNRRGSAHSSVGKGSASGLD+K        R   R E  RARLKARLKRARLAARPEVARLAARVEGARLEARTDGGSACGRLKARLTARMERSRLAAPM
Subjt:  SNRRGSAHSSVGKGSASGLDVKGSASGSNGRGSDRPEAARARLKARLKRARLAARPEVARLAARVEGARLEARTDGGSACGRLKARLTARMERSRLAAPM

Query:  DRVPLAARTERAGLADRIEETR
        DRVPLAARTERAGLADRIEETR
Subjt:  DRVPLAARTERAGLADRIEETR
TrEMBL top hitse value%identityAlignment
A0A5A7UPM6 SH3 domain-containing protein5.2e-9193.24Show/hide
Query:  MAKRKRLGRKGRMAHVYGRRGARLTARSDGSSRLGNGRATDSRGRARLGNKGAAHGSAEGSAHDSDGRARLAARTETARLMALKKISRRHGSDGSGSAHG
        MAKRKRLGRKGRMAHVYGRRGARLTARSDGSSRLGNGRATDSRGRARLGNKGAAHGSAEGSAHDSDGRARLAARTETARLMALKKISRRHGSDGSGSAHG
Subjt:  MAKRKRLGRKGRMAHVYGRRGARLTARSDGSSRLGNGRATDSRGRARLGNKGAAHGSAEGSAHDSDGRARLAARTETARLMALKKISRRHGSDGSGSAHG

Query:  SNRRGSAHSSVGKGSASGLDVKGSASGSNGRGSDRPEAARARLKARLKRARLAARPEVARLAARVEGARLEARTDGGSACGRLKARLTARMERSRLAAPM
        SNRRGSAHSSVGKGSASGLD+K        R   R E  RARLKARLKRARLAARPEVARLAARVEGARLEARTDGGSACGRLKARLTARMERSRLAAPM
Subjt:  SNRRGSAHSSVGKGSASGLDVKGSASGSNGRGSDRPEAARARLKARLKRARLAARPEVARLAARVEGARLEARTDGGSACGRLKARLTARMERSRLAAPM

Query:  DRVPLAARTERAGLADRIEETR
        DRVPLAARTERAGLADRIEETR
Subjt:  DRVPLAARTERAGLADRIEETR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGAGAAAACGGCTCGGGCGGAAGGGGCGCATGGCTCACGTCTACGGTAGAAGAGGTGCACGGCTCACGGCTCGGTCCGACGGGAGCTCGCGGCTCGGAAACGG
AAGGGCTACCGACTCGCGTGGAAGGGCTCGGCTCGGAAATAAAGGAGCGGCTCACGGCTCGGCGGAGGGCTCGGCTCACGACTCGGACGGAAGGGCTCGGCTCGCAGCGC
GGACGGAAACGGCTCGGCTCATGGCTCTAAAGAAAATATCTCGGCGGCACGGCTCGGATGGAAGTGGCTCGGCTCACGGCTCGAACAGAAGGGGCTCGGCTCACAGCTCG
GTTGGAAAGGGCTCGGCTAGCGGCTTGGATGTAAAGGGCTCGGCTAGCGGCTCGAATGGAAGGGGCTCTGATCGACCGGAAGCGGCTCGGGCTCGGCTCAAGGCTCGGTT
AAAAAGGGCTCGGCTGGCGGCTCGGCCGGAAGTAGCTCGGCTCGCAGCTCGGGTCGAAGGGGCTCGGCTAGAGGCTCGGACGGATGGGGGCTCAGCTTGCGGTCGGTTGA
AAGCTCGGCTCACAGCTCGGATGGAAAGGTCTCGGCTCGCGGCTCCGATGGATAGGGTTCCGCTCGCGGCTCGGACGGAGAGGGCTGGACTCGCGGATCGGATAGAAGAG
ACTCGATTCGCGGCTTGGAGACGGAAGGGCGCGGCTCACGGCATGGATGGAGGGTGCGCGCGGCTTAGAAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAGAGAAAACGGCTCGGGCGGAAGGGGCGCATGGCTCACGTCTACGGTAGAAGAGGTGCACGGCTCACGGCTCGGTCCGACGGGAGCTCGCGGCTCGGAAACGG
AAGGGCTACCGACTCGCGTGGAAGGGCTCGGCTCGGAAATAAAGGAGCGGCTCACGGCTCGGCGGAGGGCTCGGCTCACGACTCGGACGGAAGGGCTCGGCTCGCAGCGC
GGACGGAAACGGCTCGGCTCATGGCTCTAAAGAAAATATCTCGGCGGCACGGCTCGGATGGAAGTGGCTCGGCTCACGGCTCGAACAGAAGGGGCTCGGCTCACAGCTCG
GTTGGAAAGGGCTCGGCTAGCGGCTTGGATGTAAAGGGCTCGGCTAGCGGCTCGAATGGAAGGGGCTCTGATCGACCGGAAGCGGCTCGGGCTCGGCTCAAGGCTCGGTT
AAAAAGGGCTCGGCTGGCGGCTCGGCCGGAAGTAGCTCGGCTCGCAGCTCGGGTCGAAGGGGCTCGGCTAGAGGCTCGGACGGATGGGGGCTCAGCTTGCGGTCGGTTGA
AAGCTCGGCTCACAGCTCGGATGGAAAGGTCTCGGCTCGCGGCTCCGATGGATAGGGTTCCGCTCGCGGCTCGGACGGAGAGGGCTGGACTCGCGGATCGGATAGAAGAG
ACTCGATTCGCGGCTTGGAGACGGAAGGGCGCGGCTCACGGCATGGATGGAGGGTGCGCGCGGCTTAGAAGGTGA
Protein sequenceShow/hide protein sequence
MAKRKRLGRKGRMAHVYGRRGARLTARSDGSSRLGNGRATDSRGRARLGNKGAAHGSAEGSAHDSDGRARLAARTETARLMALKKISRRHGSDGSGSAHGSNRRGSAHSS
VGKGSASGLDVKGSASGSNGRGSDRPEAARARLKARLKRARLAARPEVARLAARVEGARLEARTDGGSACGRLKARLTARMERSRLAAPMDRVPLAARTERAGLADRIEE
TRFAAWRRKGAAHGMDGGCARLRR