; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0013355 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013355
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDNA-directed RNA polymerase III subunit RPC6-like
Genome locationchr08:2260786..2262386
RNA-Seq ExpressionIVF0013355
SyntenyIVF0013355
Gene Ontology termsGO:0006383 - transcription by RNA polymerase III (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR007832 - RNA polymerase Rpc34
IPR016049 - RNA polymerase Rpc34-like
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052744.1 DNA-directed RNA polymerase III subunit RPC6-like [Cucumis melo var. makuwa]1.13e-173100Show/hide
Query:  MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGGLK
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGGLK
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGGLK

Query:  GEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
        GEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
Subjt:  GEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF

TYK13079.1 DNA-directed RNA polymerase III subunit RPC6-like [Cucumis melo var. makuwa]1.13e-173100Show/hide
Query:  MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGGLK
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGGLK
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGGLK

Query:  GEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
        GEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
Subjt:  GEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF

TYK19400.1 DNA-directed RNA polymerase III subunit rpc6-like [Cucumis melo var. makuwa]4.19e-16896.71Show/hide
Query:  MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        MSKSQGPSSLKRKRPDL TKNSS GALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGG-L
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVEL+REQIEEIVNALVLDNQV EVKSSGFGEFEFIPIGKICYKYC+QGG L
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGG-L

Query:  KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
        KGEPK GAMASIPCGVCPRIT+CTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF

XP_008439941.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Cucumis melo]1.68e-175100Show/hide
Query:  MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGGLK
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGGLK
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGGLK

Query:  GEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
        GEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
Subjt:  GEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF

XP_008448982.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Cucumis melo]3.62e-16896.71Show/hide
Query:  MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        MSKSQGPSSLKRKRPDL TKNSS GALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGG-L
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVEL+REQIEEIVNALVLDNQV EVKSSGFGEFEFIPIGKICYKYC+QGG L
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGG-L

Query:  KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
        KGEPK GAMASIPCGVCPRIT+CTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF

TrEMBL top hitse value%identityAlignment
A0A1S3AZZ6 DNA-directed RNA polymerase III subunit RPC6-like4.5e-135100Show/hide
Query:  MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGGLK
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGGLK
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGGLK

Query:  GEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
        GEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
Subjt:  GEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF

A0A1S3BL06 DNA-directed RNA polymerase III subunit rpc6-like1.7e-12996.71Show/hide
Query:  MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        MSKSQGPSSLKRKRPDL TKNSS GALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQ-GGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVEL+REQIEEIVNALVLDNQV EVKSSGFGEFEFIPIGKICYKYC+Q GGL
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQ-GGL

Query:  KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
        KGEPK GAMASIPCGVCPRIT+CTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF

A0A5A7UBI4 DNA-directed RNA polymerase III subunit RPC6-like4.5e-135100Show/hide
Query:  MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGGLK
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGGLK
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGGLK

Query:  GEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
        GEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
Subjt:  GEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF

A0A5D3CS47 DNA-directed RNA polymerase III subunit RPC6-like4.5e-135100Show/hide
Query:  MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGGLK
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGGLK
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGGLK

Query:  GEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
        GEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
Subjt:  GEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF

A0A5D3D7H7 DNA-directed RNA polymerase III subunit rpc6-like1.7e-12996.71Show/hide
Query:  MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        MSKSQGPSSLKRKRPDL TKNSS GALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQ-GGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVEL+REQIEEIVNALVLDNQV EVKSSGFGEFEFIPIGKICYKYC+Q GGL
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQ-GGL

Query:  KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
        KGEPK GAMASIPCGVCPRIT+CTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF

SwissProt top hitse value%identityAlignment
Q2T9S3 DNA-directed RNA polymerase III subunit RPC69.9e-2330.74Show/hide
Query:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR
        QEK++Y +I    + GI + D++ ++    + + K LK+L++K LIK V+      KK Y+  + +P + +TGG WY D + + +++  L Q C + +Q 
Subjt:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR

Query:  KKLMTIEGIV-------ESFKQS----------GAFKVELTREQIEEIVNALVLDNQV-TEVKSSGFGEFEFIPIGKICYKYCSQGGLKGEPKTGAMASI
        K     E           SF  S          G  KVEL+ E IE I+N L+ D +V   + ++  G    +      Y+  S       P TG +   
Subjt:  KKLMTIEGIV-------ESFKQS----------GAFKVELTREQIEEIVNALVLDNQV-TEVKSSGFGEFEFIPIGKICYKYCSQGGLKGEPKTGAMASI

Query:  PCGVCPRITHCTPNGIISPATCVYYTKWLDF
        PCG+CP    C   G ISP+ C+Y T+WL+F
Subjt:  PCGVCPRITHCTPNGIISPATCVYYTKWLDF

Q86JM3 DNA-directed RNA polymerase III subunit rpc61.1e-2127.57Show/hide
Query:  MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        +  S   +S K   P+   K   +G    ++ ++Y LI +  + G  T ++K  + + +  +TK LK+L+++ LIK V+  Q+  KK Y+  + EP++E+
Subjt:  MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQ--SGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGG
        TGG  Y D   D  YI  +K      +  K  + +  I+   ++    A    L  E I+ +VN ++ D  + E++ +  G       G I YK      
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQ--SGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGG

Query:  LKGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLD
         K         ++PCG CP    C+ NG++SP  CVY+ ++L+
Subjt:  LKGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLD

Q921X6 DNA-directed RNA polymerase III subunit RPC69.9e-2329.88Show/hide
Query:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR
        QEK++Y +I    + GI + D++ ++    + + K LK+L++K LIK V+      KK Y+  + +P + +TGG WY D + + +++  L Q C + +Q 
Subjt:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR

Query:  KKLMTIEG----IVE---SFKQS----------GAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGGLKGE----------
        K     E     +++   SF  S          G  KVEL+ E IE I+N L+ D +V               +  I  K  + G + G           
Subjt:  KKLMTIEG----IVE---SFKQS----------GAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGGLKGE----------

Query:  -PKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
         P TG + + PCG+CP    C   G ISP+ C+Y T+WL+F
Subjt:  -PKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF

Q9H1D9 DNA-directed RNA polymerase III subunit RPC62.2e-2229.88Show/hide
Query:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR
        QEK++Y +I    + GI + D++ ++    + + K LK+L++K LIK V+      KK Y+  + +P + +TGG WY D + + +++  L Q C + +Q 
Subjt:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR

Query:  KKLMTIEGIV-------ESFKQS----------GAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGGLKGE----------
        K     E           SF  S          G  KVEL+ E IE I+N L+ D +V               +  I  K  + G + G           
Subjt:  KKLMTIEGIV-------ESFKQS----------GAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGGLKGE----------

Query:  -PKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
         P TG +   PCG+CP    C   G ISP+ C+Y T+WL+F
Subjt:  -PKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF

Q9VD25 Probable DNA-directed RNA polymerase III subunit RPC67.1e-2127.51Show/hide
Query:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR
        +EKV+Y ++    + GI   D++ ++      + K LK+L+TK LIK V+      KK Y+  + EP   +TGG WY+D + + ++++ L Q C R +Q 
Subjt:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR

Query:  KK-----------------LMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGGLKGEPKTGAMASIP
        K+                   T+  + +     G  KV L    +E I+  +V D     V+    G F +  +                P TG +  +P
Subjt:  KK-----------------LMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGGLKGEPKTGAMASIP

Query:  CGVCPRITHCTPNGIISPATCVYYTKWLD
        CG+CP I +C+  G ++  TC Y   WLD
Subjt:  CGVCPRITHCTPNGIISPATCVYYTKWLD

Arabidopsis top hitse value%identityAlignment
AT5G23710.1 DNA binding;DNA-directed RNA polymerases8.9e-5145.3Show/hide
Query:  KRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGE
        KRKRPD   K+S        EK L DLI   Q  G   F++KRE     ++VT+ + SL+ K LIK V +  NKG K YL+ +FEP  ELTGG WY DG 
Subjt:  KRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGE

Query:  LDKDYINTLKQVCARMIQ--RKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGGLKGEPKTGAM
        LD   I  LK  C  +++  R++++T+E +   F +    + +L+ +Q +EI+  L+LDN + EVKS+G  EF    IG++CY+   +    GEP+ GA 
Subjt:  LDKDYINTLKQVCARMIQ--RKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGGLKGEPKTGAM

Query:  ASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
        ASIPCGVCP I  C+P+G+ISP TCVY+ KWLDF
Subjt:  ASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAAATCACAAGGGCCATCATCACTCAAGAGAAAAAGGCCAGATTTGAGTACGAAAAATTCCTCTGTAGGAGCTCTAATTGGGCAAGAAAAAGTTCTCTATGACCT
AATTTGCAGCAAGCAAAGCATGGGGATTTGCACTTTTGACATGAAAAGAGAAACAAAGTTTGCCGAAAGTGTTGTAACAAAATCCCTTAAGTCTCTTCAAACCAAAGGCC
TGATAAAGATAGTCCAACACTATCAAAACAAAGGCAAGAAGTTCTACCTATCTAACGATTTTGAACCAGCTAAGGAATTAACCGGTGGTAACTGGTATCGTGACGGGGAG
CTCGACAAAGACTACATCAATACTCTCAAACAAGTTTGTGCAAGAATGATACAAAGGAAGAAGTTGATGACCATTGAAGGGATTGTGGAGTCTTTCAAACAGAGTGGAGC
TTTCAAAGTAGAGTTGACAAGAGAACAAATTGAAGAGATTGTAAATGCTTTGGTGTTGGACAATCAAGTGACGGAAGTGAAGAGCTCTGGATTTGGTGAATTTGAATTTA
TTCCAATTGGGAAGATTTGTTATAAGTATTGTAGTCAAGGAGGCCTCAAAGGGGAGCCTAAAACAGGGGCAATGGCTTCCATTCCTTGTGGAGTTTGTCCAAGGATCACT
CATTGTACCCCAAATGGCATCATTTCTCCTGCTACCTGTGTCTATTATACCAAGTGGTTAGATTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATTCAAAGTTATAATCCGACCCTCAACCCATCCAACGAACCCAAATTCAGGGTTCGAATTCGTAAAAATTTGAAAATTTTAGTGCCAGATTTTGAGTTTTGTTCCCCTGT
TTCTTTCCCAAAACCTAATTCTTTTGTAAGACCTCCGCCTTCTTCTTTTTCCTACCGACCTTCTTCCCTCATCCTCATTTATCCTTCACCGGCGACGGCGACGGCAACGG
CAAGGGCTCGTTCCCACCAGCCAGATTTTGACGATTGAAATCAATGAGTAAATCACAAGGGCCATCATCACTCAAGAGAAAAAGGCCAGATTTGAGTACGAAAAATTCCT
CTGTAGGAGCTCTAATTGGGCAAGAAAAAGTTCTCTATGACCTAATTTGCAGCAAGCAAAGCATGGGGATTTGCACTTTTGACATGAAAAGAGAAACAAAGTTTGCCGAA
AGTGTTGTAACAAAATCCCTTAAGTCTCTTCAAACCAAAGGCCTGATAAAGATAGTCCAACACTATCAAAACAAAGGCAAGAAGTTCTACCTATCTAACGATTTTGAACC
AGCTAAGGAATTAACCGGTGGTAACTGGTATCGTGACGGGGAGCTCGACAAAGACTACATCAATACTCTCAAACAAGTTTGTGCAAGAATGATACAAAGGAAGAAGTTGA
TGACCATTGAAGGGATTGTGGAGTCTTTCAAACAGAGTGGAGCTTTCAAAGTAGAGTTGACAAGAGAACAAATTGAAGAGATTGTAAATGCTTTGGTGTTGGACAATCAA
GTGACGGAAGTGAAGAGCTCTGGATTTGGTGAATTTGAATTTATTCCAATTGGGAAGATTTGTTATAAGTATTGTAGTCAAGGAGGCCTCAAAGGGGAGCCTAAAACAGG
GGCAATGGCTTCCATTCCTTGTGGAGTTTGTCCAAGGATCACTCATTGTACCCCAAATGGCATCATTTCTCCTGCTACCTGTGTCTATTATACCAAGTGGTTAGATTTTT
AAGTTAACCATTTTGAAAATATACACATAATGTGCATATGAATTTGAACTTGTCTCAAGTTGTGGGACTGATTTCTGTTTTCTTTTTATTTATATATATACACATATTAC
AGTGTGTTTGGGCTAGCTTACATACTAATCTATCTAGTCTTTCAAGTTATAACATTTAGATGAAGGAAACTTTTAAGATATTAATCTTAGATAAGTAACAAA
Protein sequenceShow/hide protein sequence
MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGE
LDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGEFEFIPIGKICYKYCSQGGLKGEPKTGAMASIPCGVCPRIT
HCTPNGIISPATCVYYTKWLDF