; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0013358 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013358
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr10:13560151..13564180
RNA-Seq ExpressionIVF0013358
SyntenyIVF0013358
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR001878 - Zinc finger, CCHC-type
IPR012337 - Ribonuclease H-like superfamily
IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR036397 - Ribonuclease H superfamily
IPR036875 - Zinc finger, CCHC-type superfamily
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026233.1 gag/pol protein [Cucumis melo var. makuwa]0.081.74Show/hide
Query:  MTSATLNMLAADKLNGNNYASWKNTTNTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
        ++SATLNMLAADKLNGNNYASWKNT N VLIIDDLRFVLVE+CPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
Subjt:  MTSATLNMLAADKLNGNNYASWKNTTNTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE

Query:  MFGQASYQIKHDALKYIYNARMNKEASVREHVLYMMVHFNVEKMNGAVIDEASQVSFILESLPESLLQFRSNAVMNKIAYTLTTLLSELQTFESLMKIKG
        MFGQASYQIKHDALKYIYNARMN+ ASVREHVL MMVHFNV  MN AVIDEASQVSFILESLPES LQFRSNAVMNKIAYTLTTLL+ELQTFESLMKIKG
Subjt:  MFGQASYQIKHDALKYIYNARMNKEASVREHVLYMMVHFNVEKMNGAVIDEASQVSFILESLPESLLQFRSNAVMNKIAYTLTTLLSELQTFESLMKIKG

Query:  QKGETNVATSTRKFHKGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLTAAKTNKKAKAAKGICFHCNQEGHWKRNCPKYLAEKNKAKQGKITRRPFTGKG
        QKGE NVATSTRKFH+GSTSGTKSMPSSSGNKKWKKKKGGQGNKANL AAKT KKAKAAKGICF CNQEGHWKRNCPKYLA+K KAKQGK+T+RPFTGKG
Subjt:  QKGETNVATSTRKFHKGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLTAAKTNKKAKAAKGICFHCNQEGHWKRNCPKYLAEKNKAKQGKITRRPFTGKG

Query:  HRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLS
        HRAKEPLELVHSDLCGPMNVKARG FEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVEN LSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLS
Subjt:  HRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLS

Query:  SPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFWGY--------------------------------------------------------------
        +P TPQQNGV ERRNRTLLDMVRSMMSYAHLPNSFWGY                                                              
Subjt:  SPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFWGY--------------------------------------------------------------

Query:  --PKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGWVTNLPIYYM
          PKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKET EPSTRVVEEPSAL RVVHV SSTRTHQPQSLREPRRSG VTNLPI YM
Subjt:  --PKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGWVTNLPIYYM

Query:  SLTETLTVISDGDIEDPLTFKKAMKDVDKDEWIKAINLELESI----------------------------------------LVAKGYTQVEGVDYEET
        SLTETLTVISDGDIEDPLTFKKAM+DVDKDEWIKA+NLELES+                                        LVAKGYTQVEGVDYEET
Subjt:  SLTETLTVISDGDIEDPLTFKKAMKDVDKDEWIKAINLELESI----------------------------------------LVAKGYTQVEGVDYEET

Query:  FSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYK
        FSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFII GQEQK+CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYK
Subjt:  FSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYK

Query:  RIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDRMELLC----------------LRNSV-----LRH--------
        RIIN S+AFLVLYVDDILLIGND GLLTDIKQWL TQFQMK LGEAQFVL IQI RDR   +                 ++NS       RH        
Subjt:  RIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDRMELLC----------------LRNSV-----LRH--------

Query:  -----QDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGSKDLILTRYTDSDFQTDRDSRKSTSG
             QDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGI+SRYQSNPGLA+WTA+KTILKYLRRTRDY LVYGSKDLILT YTDSDFQTDRDSRKSTSG
Subjt:  -----QDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGSKDLILTRYTDSDFQTDRDSRKSTSG

Query:  SVFTLNGGAVVWRSIKQGCIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIECKYHLIREIVHRGDV
        SVFTLNGGAVVWRSIKQGCI DS MEAEYVAA EAAKEAVWLR FLIDLEVV N+SKPITLYCDNSGAVANS+EPRSHKR KHIE KYHLIREIVHRGDV
Subjt:  SVFTLNGGAVVWRSIKQGCIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIECKYHLIREIVHRGDV

Query:  IVTQIASTHNVADLFTKPLMAKVFEGHLESVGLRDMPHL
        IVTQIASTHNVAD FTKPL AKVFEGHLES+GLRDMPHL
Subjt:  IVTQIASTHNVADLFTKPLMAKVFEGHLESVGLRDMPHL

KAA0031826.1 gag/pol protein [Cucumis melo var. makuwa]0.070.12Show/hide
Query:  MTSATLNMLAADKLNGNNYASWKNTTNTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
        MTSATLNMLAADKLNGNNYASWKNT NTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
Subjt:  MTSATLNMLAADKLNGNNYASWKNTTNTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE

Query:  MFGQASYQIKHDALKYIYNARMNKEASVREHVLYMMVHFNVEKMNGAVIDEASQVSFILESLPESLLQFRSNAVMNKIAYTLTTLLSELQTFESLMKIKG
        MFGQASYQIKHDALKYIYNARMN+ ASVREHVL MMVHFNV +MNGAVIDEASQVSFILESLPES LQFRSNAVMNKIAYTLTTLL+ELQTFESLMKIKG
Subjt:  MFGQASYQIKHDALKYIYNARMNKEASVREHVLYMMVHFNVEKMNGAVIDEASQVSFILESLPESLLQFRSNAVMNKIAYTLTTLLSELQTFESLMKIKG

Query:  QKGETNVATSTRKFHKGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLTAAKTNKKAKAAKGICFHCNQEGHWKRNCPKYLAEKNKAKQGK----------
        QKGE NVATSTRKFH+GSTSGTKSMPSSSGNKKWKKKKGGQGNKANL AAKT KKAKAAKGICFHCNQEGHWKRNCPKYLAEK KAKQGK          
Subjt:  QKGETNVATSTRKFHKGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLTAAKTNKKAKAAKGICFHCNQEGHWKRNCPKYLAEKNKAKQGK----------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------------ITRRPFT
                                                                                                     +T+RPFT
Subjt:  ---------------------------------------------------------------------------------------------ITRRPFT

Query:  GKGHRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
        GKGHRAKEPLELVHSDLCGPMNVKARG FEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVEN LSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Subjt:  GKGHRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS

Query:  QLSSPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFWGY-----------------------------------------------------------
        QLS+PGTPQQNGV ERRNRTLLDMVRSMMSYAHLPNSFWGY                                                           
Subjt:  QLSSPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFWGY-----------------------------------------------------------

Query:  -----PKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGWVTNLPI
             PKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKET EPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSG VTNLPI
Subjt:  -----PKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGWVTNLPI

Query:  YYMSLTETLTVISDGDIEDPLTFKKAMKDVDKDEWIKAINLELESI----------------------------------------LVAKGYTQVEGVDY
         YMSLTETLTVISDGDIEDPLTFKKAM+DVDKDEWIKA+NLELES+                                        LVAKGYTQVEGVDY
Subjt:  YYMSLTETLTVISDGDIEDPLTFKKAMKDVDKDEWIKAINLELESI----------------------------------------LVAKGYTQVEGVDY

Query:  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPC
        EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFII GQEQK+CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPC
Subjt:  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPC

Query:  VYKRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDRMELLC----------------LRNSV-----LRH-----
        VYKRIIN S+AFLVLYVDDILLIGND GLLTDIKQWL TQFQMK LGEAQFVL IQI RDR   +                 ++NS       RH     
Subjt:  VYKRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDRMELLC----------------LRNSV-----LRH-----

Query:  --------QDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGSKDLILTRYTDSDFQTDRDSRKS
                QDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGI+SRYQSNPGLA+WTA+KTILKYLRRTRDY LVYGSKDLILT YTDSDFQTDRDSRKS
Subjt:  --------QDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGSKDLILTRYTDSDFQTDRDSRKS

Query:  TSGSVFTLNGGAVVWRSIKQGCIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIECKYHLIREIVHR
        TSGSVFTLNGGAVVWRSIKQGCI DS MEAEYVAA EAAKEAVWLR FLIDLEVV N+SKPITLYCDNSGAVANS+EPRSHKR KHIE KYHLIREIVHR
Subjt:  TSGSVFTLNGGAVVWRSIKQGCIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIECKYHLIREIVHR

Query:  GDVIVTQIASTHNVADLFTKPLMAKVFEGHLESVGLRDMPHL
        GDVIVTQIASTHNVAD FTKPL AKVFEGHLES+GLRDMPHL
Subjt:  GDVIVTQIASTHNVADLFTKPLMAKVFEGHLESVGLRDMPHL

KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa]0.070.04Show/hide
Query:  MTSATLNMLAADKLNGNNYASWKNTTNTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
        MTSATLNMLAADKLNGNNYASWKNT NTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
Subjt:  MTSATLNMLAADKLNGNNYASWKNTTNTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE

Query:  MFGQASYQIKHDALKYIYNARMNKEASVREHVLYMMVHFNVEKMNGAVIDEASQVSFILESLPESLLQFRSNAVMNKIAYTLTTLLSELQTFESLMKIKG
        MFGQASYQIKHDALKYIYNARMN+ ASVREHVL MMVHFNV +MNGAVIDEASQVSFILESLPES LQFRSNAVMNKIAYTLTTLL+ELQTFESLMKIKG
Subjt:  MFGQASYQIKHDALKYIYNARMNKEASVREHVLYMMVHFNVEKMNGAVIDEASQVSFILESLPESLLQFRSNAVMNKIAYTLTTLLSELQTFESLMKIKG

Query:  QKGETNVATSTRKFHKGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLTAAKTNKKAKAAKGICFHCNQEGHWKRNCPKYLAEKNKAKQGK----------
        QKGE NVATSTRKFH+GSTSGTKSMPSSSGNKKWKKKKGGQGNKANL AAKT KK KAAKGICFHCNQEGHWKRNCPKYLAEK KAKQGK          
Subjt:  QKGETNVATSTRKFHKGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLTAAKTNKKAKAAKGICFHCNQEGHWKRNCPKYLAEKNKAKQGK----------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------------ITRRPFT
                                                                                                     +T+RPFT
Subjt:  ---------------------------------------------------------------------------------------------ITRRPFT

Query:  GKGHRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
        GKGHRAKEPLELVHSDLCGPMNVKARG FEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVEN LSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Subjt:  GKGHRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS

Query:  QLSSPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFWGY-----------------------------------------------------------
        QLS+PGTPQQNGV ERRNRTLLDMVRSMMSYAHLPNSFWGY                                                           
Subjt:  QLSSPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFWGY-----------------------------------------------------------

Query:  -----PKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGWVTNLPI
             PKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKET EPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSG VTNLPI
Subjt:  -----PKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGWVTNLPI

Query:  YYMSLTETLTVISDGDIEDPLTFKKAMKDVDKDEWIKAINLELESI----------------------------------------LVAKGYTQVEGVDY
         YMSLTETLTVISDGDIEDPLTFKKAM+DVDKDEWIKA+NLELES+                                        LVAKGYTQVEGVDY
Subjt:  YYMSLTETLTVISDGDIEDPLTFKKAMKDVDKDEWIKAINLELESI----------------------------------------LVAKGYTQVEGVDY

Query:  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPC
        EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFII GQEQK+CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPC
Subjt:  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPC

Query:  VYKRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDRMELLC----------------LRNSV-----LRH-----
        VYKRIIN S+AFLVLYVDDILLIGND GLLTDIKQWL TQFQMK LGEAQFVL IQI RDR   +                 ++NS       RH     
Subjt:  VYKRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDRMELLC----------------LRNSV-----LRH-----

Query:  --------QDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGSKDLILTRYTDSDFQTDRDSRKS
                QDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGI+SRYQSNPGLA+WTA+KTILKYLRRTRDY LVYGSKDLILT YTDSDFQTDRDSRKS
Subjt:  --------QDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGSKDLILTRYTDSDFQTDRDSRKS

Query:  TSGSVFTLNGGAVVWRSIKQGCIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIECKYHLIREIVHR
        TSGSVFTLNGGAVVWRSIKQGCI DS MEAEYVAA EAAKEAVWLR FLIDLEVV N+SKPITLYCDNSGAVANS+EPRSHKR KHIE KYHLIREIVHR
Subjt:  TSGSVFTLNGGAVVWRSIKQGCIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIECKYHLIREIVHR

Query:  GDVIVTQIASTHNVADLFTKPLMAKVFEGHLESVGLRDMPHL
        GDVIVTQIASTHNVAD FTKPL AKVFEGHLES+GLRDMPHL
Subjt:  GDVIVTQIASTHNVADLFTKPLMAKVFEGHLESVGLRDMPHL

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]0.070.12Show/hide
Query:  MTSATLNMLAADKLNGNNYASWKNTTNTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
        MTSATLNMLAADKLNGNNYASWKNT NTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
Subjt:  MTSATLNMLAADKLNGNNYASWKNTTNTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE

Query:  MFGQASYQIKHDALKYIYNARMNKEASVREHVLYMMVHFNVEKMNGAVIDEASQVSFILESLPESLLQFRSNAVMNKIAYTLTTLLSELQTFESLMKIKG
        MFGQASYQIKHDALKYIYNARMN+ ASVREHVL MMVHFNV +MNGAVIDEASQVSFILESLPES LQFRSNAVMNKIAYTLTTLL+ELQTFESLMKIKG
Subjt:  MFGQASYQIKHDALKYIYNARMNKEASVREHVLYMMVHFNVEKMNGAVIDEASQVSFILESLPESLLQFRSNAVMNKIAYTLTTLLSELQTFESLMKIKG

Query:  QKGETNVATSTRKFHKGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLTAAKTNKKAKAAKGICFHCNQEGHWKRNCPKYLAEKNKAKQGK----------
        QKGE NVATSTRKFH+GSTSGTKSMPSSSGNKKWKKKKGGQGNKANL AAKT KKAKAAKGICFHCNQEGHWKRNCPKYLAEK KAKQGK          
Subjt:  QKGETNVATSTRKFHKGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLTAAKTNKKAKAAKGICFHCNQEGHWKRNCPKYLAEKNKAKQGK----------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------------ITRRPFT
                                                                                                     +T+RPFT
Subjt:  ---------------------------------------------------------------------------------------------ITRRPFT

Query:  GKGHRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
        GKGHRAKEPLELVHSDLCGPMNVKARG FEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVEN LSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Subjt:  GKGHRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS

Query:  QLSSPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFWGY-----------------------------------------------------------
        QLS+PGTPQQNGV ERRNRTLLDMVRSMMSYAHLPNSFWGY                                                           
Subjt:  QLSSPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFWGY-----------------------------------------------------------

Query:  -----PKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGWVTNLPI
             PKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKET EPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSG VTNLPI
Subjt:  -----PKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGWVTNLPI

Query:  YYMSLTETLTVISDGDIEDPLTFKKAMKDVDKDEWIKAINLELESI----------------------------------------LVAKGYTQVEGVDY
         YMSLTETLTVISDGDIEDPLTFKKAM+DVDKDEWIKA+NLELES+                                        LVAKGYTQVEGVDY
Subjt:  YYMSLTETLTVISDGDIEDPLTFKKAMKDVDKDEWIKAINLELESI----------------------------------------LVAKGYTQVEGVDY

Query:  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPC
        EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFII GQEQK+CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPC
Subjt:  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPC

Query:  VYKRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDRMELLC----------------LRNSV-----LRH-----
        VYKRIIN S+AFLVLYVDDILLIGND GLLTDIKQWL TQFQMK LGEAQFVL IQI RDR   +                 ++NS       RH     
Subjt:  VYKRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDRMELLC----------------LRNSV-----LRH-----

Query:  --------QDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGSKDLILTRYTDSDFQTDRDSRKS
                QDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGI+SRYQSNPGLA+WTA+KTILKYLRRTRDY LVYGSKDLILT YTDSDFQTDRDSRKS
Subjt:  --------QDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGSKDLILTRYTDSDFQTDRDSRKS

Query:  TSGSVFTLNGGAVVWRSIKQGCIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIECKYHLIREIVHR
        TSGSVFTLNGGAVVWRSIKQGCI DS MEAEYVAA EAAKEAVWLR FLIDLEVV N+SKPITLYCDNSGAVANS+EPRSHKR KHIE KYHLIREIVHR
Subjt:  TSGSVFTLNGGAVVWRSIKQGCIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIECKYHLIREIVHR

Query:  GDVIVTQIASTHNVADLFTKPLMAKVFEGHLESVGLRDMPHL
        GDVIVTQIASTHNVAD FTKPL AKVFEGHLES+GLRDMPHL
Subjt:  GDVIVTQIASTHNVADLFTKPLMAKVFEGHLESVGLRDMPHL

TYK26319.1 gag/pol protein [Cucumis melo var. makuwa]0.073.08Show/hide
Query:  MTSATLNMLAADKLNGNNYASWKNTTNTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
        MTSATLNMLAADKLNGNNYASWKNTTNTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
Subjt:  MTSATLNMLAADKLNGNNYASWKNTTNTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE

Query:  MFGQASYQIKHDALKYIYNARMNKEASVREHVLYMMVHFNVEKMNGAVIDEASQVSFILESLPESLLQFRSNAVMNKIAYTLTTLLSELQTFESLMKIKG
        MFGQASYQIKHDALKYIYNARMNKEASVREHVLYMMVHFNVEKMNGAVIDEASQVSFILESLPESLLQFRSNAVMNKIAYTLTTLL+ELQTFESLMKIKG
Subjt:  MFGQASYQIKHDALKYIYNARMNKEASVREHVLYMMVHFNVEKMNGAVIDEASQVSFILESLPESLLQFRSNAVMNKIAYTLTTLLSELQTFESLMKIKG

Query:  QKGETNVATSTRKFHKGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLTAAKTNKKAKAAKGICFHCNQEGHWKRNCPKYLAEKNKAKQGK----------
        QKGE NVATSTRKFH+GSTSGTKSMPSSSGNKKWKKKKGGQGNKANL AAKT KK KAAKGICFHCNQEGHWKRNCPKYLAEK KAKQGK          
Subjt:  QKGETNVATSTRKFHKGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLTAAKTNKKAKAAKGICFHCNQEGHWKRNCPKYLAEKNKAKQGK----------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------------ITRRPFT
                                                                                                     +T+RPFT
Subjt:  ---------------------------------------------------------------------------------------------ITRRPFT

Query:  GKGHRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
        GKGHRAKEPLELVHSDLCGPMNVKARG FEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVEN LSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Subjt:  GKGHRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS

Query:  QLSSPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFWGY-----------------------------------------------------------
        QLS+PGTPQQNGV ERRNRTLLDMVRSMMSYAHLPNSFWGY                                                           
Subjt:  QLSSPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFWGY-----------------------------------------------------------

Query:  -----PKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGWVTNLPI
             PKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKET EPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSG VTNLPI
Subjt:  -----PKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGWVTNLPI

Query:  YYMSLTETLTVISDGDIEDPLTFKKAMKDVDKDEWIKAINLELESI----------------------------------------LVAKGYTQVEGVDY
         YMSLTETLTVISDGDIEDPLTFKKAM+DVDKDEWIKA+NLELES+                                        LVAKGYTQVEGVDY
Subjt:  YYMSLTETLTVISDGDIEDPLTFKKAMKDVDKDEWIKAINLELESI----------------------------------------LVAKGYTQVEGVDY

Query:  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPC
        EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFII GQEQK+CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPC
Subjt:  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPC

Query:  VYKRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDRMELLCLRNSVLRH-------------QDVEEMRHIPYAS
        VYKRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDR     L  S   H             QDVEEMRHIPYAS
Subjt:  VYKRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDRMELLCLRNSVLRH-------------QDVEEMRHIPYAS

Query:  AVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGSKDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQG
        AVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGSKDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQG
Subjt:  AVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGSKDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQG

Query:  CIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIECKYHLIREIVHRGDVIVTQIASTHNVADLFTKP
        CIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIECKYHLIREIVHRGDVIVTQIASTHNVADLFTKP
Subjt:  CIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIECKYHLIREIVHRGDVIVTQIASTHNVADLFTKP

Query:  LMAK
        LMAK
Subjt:  LMAK

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein0.0e+0070.12Show/hide
Query:  MTSATLNMLAADKLNGNNYASWKNTTNTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
        MTSATLNMLAADKLNGNNYASWKNT NTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
Subjt:  MTSATLNMLAADKLNGNNYASWKNTTNTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE

Query:  MFGQASYQIKHDALKYIYNARMNKEASVREHVLYMMVHFNVEKMNGAVIDEASQVSFILESLPESLLQFRSNAVMNKIAYTLTTLLSELQTFESLMKIKG
        MFGQASYQIKHDALKYIYNARMN+ ASVREHVL MMVHFNV +MNGAVIDEASQVSFILESLPES LQFRSNAVMNKIAYTLTTLL+ELQTFESLMKIKG
Subjt:  MFGQASYQIKHDALKYIYNARMNKEASVREHVLYMMVHFNVEKMNGAVIDEASQVSFILESLPESLLQFRSNAVMNKIAYTLTTLLSELQTFESLMKIKG

Query:  QKGETNVATSTRKFHKGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLTAAKTNKKAKAAKGICFHCNQEGHWKRNCPKYLAEKNKAKQ------------
        QKGE NVATSTRKFH+GSTSGTKSMPSSSGNKKWKKKKGGQGNKANL AAKT KKAKAAKGICFHCNQEGHWKRNCPKYLAEK KAKQ            
Subjt:  QKGETNVATSTRKFHKGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLTAAKTNKKAKAAKGICFHCNQEGHWKRNCPKYLAEKNKAKQ------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------------------GKITRRPFT
                                                                                                   GK+T+RPFT
Subjt:  -------------------------------------------------------------------------------------------GKITRRPFT

Query:  GKGHRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
        GKGHRAKEPLELVHSDLCGPMNVKARG FEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVEN LSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Subjt:  GKGHRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS

Query:  QLSSPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFW-------------------------------------------------------------
        QLS+PGTPQQNGV ERRNRTLLDMVRSMMSYAHLPNSFW                                                             
Subjt:  QLSSPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFW-------------------------------------------------------------

Query:  ---GYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGWVTNLPI
           GYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKET EPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSG VTNLPI
Subjt:  ---GYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGWVTNLPI

Query:  YYMSLTETLTVISDGDIEDPLTFKKAMKDVDKDEWIKAINLELESI----------------------------------------LVAKGYTQVEGVDY
         YMSLTETLTVISDGDIEDPLTFKKAM+DVDKDEWIKA+NLELES+                                        LVAKGYTQVEGVDY
Subjt:  YYMSLTETLTVISDGDIEDPLTFKKAMKDVDKDEWIKAINLELESI----------------------------------------LVAKGYTQVEGVDY

Query:  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPC
        EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFII GQEQK+CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPC
Subjt:  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPC

Query:  VYKRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDRMELL----------------CLRNS-----VLRH-----
        VYKRIIN S+AFLVLYVDDILLIGND GLLTDIKQWL TQFQMK LGEAQFVL IQI RDR   +                 ++NS       RH     
Subjt:  VYKRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDRMELL----------------CLRNS-----VLRH-----

Query:  --------QDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGSKDLILTRYTDSDFQTDRDSRKS
                QDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGI+SRYQSNPGLA+WTA+KTILKYLRRTRDY LVYGSKDLILT YTDSDFQTDRDSRKS
Subjt:  --------QDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGSKDLILTRYTDSDFQTDRDSRKS

Query:  TSGSVFTLNGGAVVWRSIKQGCIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIECKYHLIREIVHR
        TSGSVFTLNGGAVVWRSIKQGCI DS MEAEYVAA EAAKEAVWLR FLIDLEVV N+SKPITLYCDNSGAVANS+EPRSHKR KHIE KYHLIREIVHR
Subjt:  TSGSVFTLNGGAVVWRSIKQGCIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIECKYHLIREIVHR

Query:  GDVIVTQIASTHNVADLFTKPLMAKVFEGHLESVGLRDMPHL
        GDVIVTQIASTHNVAD FTKPL AKVFEGHLES+GLRDMPHL
Subjt:  GDVIVTQIASTHNVADLFTKPLMAKVFEGHLESVGLRDMPHL

A0A5A7SNP8 Gag/pol protein0.0e+0081.74Show/hide
Query:  MTSATLNMLAADKLNGNNYASWKNTTNTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
        ++SATLNMLAADKLNGNNYASWKNT N VLIIDDLRFVLVE+CPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
Subjt:  MTSATLNMLAADKLNGNNYASWKNTTNTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE

Query:  MFGQASYQIKHDALKYIYNARMNKEASVREHVLYMMVHFNVEKMNGAVIDEASQVSFILESLPESLLQFRSNAVMNKIAYTLTTLLSELQTFESLMKIKG
        MFGQASYQIKHDALKYIYNARMN+ ASVREHVL MMVHFNV  MN AVIDEASQVSFILESLPES LQFRSNAVMNKIAYTLTTLL+ELQTFESLMKIKG
Subjt:  MFGQASYQIKHDALKYIYNARMNKEASVREHVLYMMVHFNVEKMNGAVIDEASQVSFILESLPESLLQFRSNAVMNKIAYTLTTLLSELQTFESLMKIKG

Query:  QKGETNVATSTRKFHKGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLTAAKTNKKAKAAKGICFHCNQEGHWKRNCPKYLAEKNKAKQGKITRRPFTGKG
        QKGE NVATSTRKFH+GSTSGTKSMPSSSGNKKWKKKKGGQGNKANL AAKT KKAKAAKGICF CNQEGHWKRNCPKYLA+K KAKQGK+T+RPFTGKG
Subjt:  QKGETNVATSTRKFHKGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLTAAKTNKKAKAAKGICFHCNQEGHWKRNCPKYLAEKNKAKQGKITRRPFTGKG

Query:  HRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLS
        HRAKEPLELVHSDLCGPMNVKARG FEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVEN LSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLS
Subjt:  HRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLS

Query:  SPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFW----------------------------------------------------------------
        +P TPQQNGV ERRNRTLLDMVRSMMSYAHLPNSFW                                                                
Subjt:  SPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFW----------------------------------------------------------------

Query:  GYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGWVTNLPIYYM
        GYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKET EPSTRVVEEPSAL RVVHV SSTRTHQPQSLREPRRSG VTNLPI YM
Subjt:  GYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGWVTNLPIYYM

Query:  SLTETLTVISDGDIEDPLTFKKAMKDVDKDEWIKAINLELESI----------------------------------------LVAKGYTQVEGVDYEET
        SLTETLTVISDGDIEDPLTFKKAM+DVDKDEWIKA+NLELES+                                        LVAKGYTQVEGVDYEET
Subjt:  SLTETLTVISDGDIEDPLTFKKAMKDVDKDEWIKAINLELESI----------------------------------------LVAKGYTQVEGVDYEET

Query:  FSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYK
        FSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFII GQEQK+CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYK
Subjt:  FSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYK

Query:  RIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDRMELL----------------CLRNS-----VLRH--------
        RIIN S+AFLVLYVDDILLIGND GLLTDIKQWL TQFQMK LGEAQFVL IQI RDR   +                 ++NS       RH        
Subjt:  RIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDRMELL----------------CLRNS-----VLRH--------

Query:  -----QDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGSKDLILTRYTDSDFQTDRDSRKSTSG
             QDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGI+SRYQSNPGLA+WTA+KTILKYLRRTRDY LVYGSKDLILT YTDSDFQTDRDSRKSTSG
Subjt:  -----QDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGSKDLILTRYTDSDFQTDRDSRKSTSG

Query:  SVFTLNGGAVVWRSIKQGCIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIECKYHLIREIVHRGDV
        SVFTLNGGAVVWRSIKQGCI DS MEAEYVAA EAAKEAVWLR FLIDLEVV N+SKPITLYCDNSGAVANS+EPRSHKR KHIE KYHLIREIVHRGDV
Subjt:  SVFTLNGGAVVWRSIKQGCIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIECKYHLIREIVHRGDV

Query:  IVTQIASTHNVADLFTKPLMAKVFEGHLESVGLRDMPHL
        IVTQIASTHNVAD FTKPL AKVFEGHLES+GLRDMPHL
Subjt:  IVTQIASTHNVADLFTKPLMAKVFEGHLESVGLRDMPHL

A0A5A7TZD7 Gag/pol protein0.0e+0070.12Show/hide
Query:  MTSATLNMLAADKLNGNNYASWKNTTNTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
        MTSATLNMLAADKLNGNNYASWKN TNTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
Subjt:  MTSATLNMLAADKLNGNNYASWKNTTNTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE

Query:  MFGQASYQIKHDALKYIYNARMNKEASVREHVLYMMVHFNVEKMNGAVIDEASQVSFILESLPESLLQFRSNAVMNKIAYTLTTLLSELQTFESLMKIKG
        MFGQASYQIKHDALKYIYNARMN+ ASVREHVL MMVHFNV +MNGAVIDEASQVSFILESLPES LQFRSNAVMNKIAYTLTTLL+ELQTFESLMKIKG
Subjt:  MFGQASYQIKHDALKYIYNARMNKEASVREHVLYMMVHFNVEKMNGAVIDEASQVSFILESLPESLLQFRSNAVMNKIAYTLTTLLSELQTFESLMKIKG

Query:  QKGETNVATSTRKFHKGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLTAAKTNKKAKAAKGICFHCNQEGHWKRNCPKYLAEKNKAKQ------------
        QKGE NVATSTRKFH+GSTSGTKSMPSSSGNKKWKKKKGGQGNKANL AAKT KKAKAAKGICFHCNQEGHWKRNCPKYLAEK KAKQ            
Subjt:  QKGETNVATSTRKFHKGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLTAAKTNKKAKAAKGICFHCNQEGHWKRNCPKYLAEKNKAKQ------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------------------GKITRRPFT
                                                                                                   GK+T+RPFT
Subjt:  -------------------------------------------------------------------------------------------GKITRRPFT

Query:  GKGHRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
        GKGHRAKEPLELVHSDLCGPMNVKARG FEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVEN LSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Subjt:  GKGHRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS

Query:  QLSSPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFW-------------------------------------------------------------
        QLS+PGTPQQNGV ERRNRTLLDMVRSMMSYAHLPNSFW                                                             
Subjt:  QLSSPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFW-------------------------------------------------------------

Query:  ---GYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGWVTNLPI
           GYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKET EPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSG VTNLPI
Subjt:  ---GYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGWVTNLPI

Query:  YYMSLTETLTVISDGDIEDPLTFKKAMKDVDKDEWIKAINLELESI----------------------------------------LVAKGYTQVEGVDY
         YMSLTETLTVISDGDIEDPLTFKKAM+DVDKDEWIKA+NLELES+                                        LVAKGYTQVEGVDY
Subjt:  YYMSLTETLTVISDGDIEDPLTFKKAMKDVDKDEWIKAINLELESI----------------------------------------LVAKGYTQVEGVDY

Query:  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPC
        EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFII GQEQK+CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPC
Subjt:  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPC

Query:  VYKRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDRMELL----------------CLRNS-----VLRH-----
        VYKRIIN S+AFLVLYVDDILLIGND GLLTDIKQWL TQFQMK LGEAQFVL IQI RDR   +                 ++NS       RH     
Subjt:  VYKRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDRMELL----------------CLRNS-----VLRH-----

Query:  --------QDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGSKDLILTRYTDSDFQTDRDSRKS
                QDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGI+SRYQSNPGLA+WTA+KTILKYLRRTRDY LVYGSKDLILT YTDSDFQTDRDSRKS
Subjt:  --------QDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGSKDLILTRYTDSDFQTDRDSRKS

Query:  TSGSVFTLNGGAVVWRSIKQGCIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIECKYHLIREIVHR
        TSGSVFTLNGGAVVWRSIKQGCI DS MEAEYVAA EAAKEAVWLR FLIDLEVV N+SKPITLYCDNSGAVANS+EPRSHKR KHIE KYHLIREIVHR
Subjt:  TSGSVFTLNGGAVVWRSIKQGCIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIECKYHLIREIVHR

Query:  GDVIVTQIASTHNVADLFTKPLMAKVFEGHLESVGLRDMPHL
        GDVIVTQIASTHNVAD FTKPL AKVFEGHLES+GLRDMPHL
Subjt:  GDVIVTQIASTHNVADLFTKPLMAKVFEGHLESVGLRDMPHL

A0A5D3CPJ6 Gag/pol protein0.0e+0070.04Show/hide
Query:  MTSATLNMLAADKLNGNNYASWKNTTNTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
        MTSATLNMLAADKLNGNNYASWKNT NTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
Subjt:  MTSATLNMLAADKLNGNNYASWKNTTNTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE

Query:  MFGQASYQIKHDALKYIYNARMNKEASVREHVLYMMVHFNVEKMNGAVIDEASQVSFILESLPESLLQFRSNAVMNKIAYTLTTLLSELQTFESLMKIKG
        MFGQASYQIKHDALKYIYNARMN+ ASVREHVL MMVHFNV +MNGAVIDEASQVSFILESLPES LQFRSNAVMNKIAYTLTTLL+ELQTFESLMKIKG
Subjt:  MFGQASYQIKHDALKYIYNARMNKEASVREHVLYMMVHFNVEKMNGAVIDEASQVSFILESLPESLLQFRSNAVMNKIAYTLTTLLSELQTFESLMKIKG

Query:  QKGETNVATSTRKFHKGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLTAAKTNKKAKAAKGICFHCNQEGHWKRNCPKYLAEKNKAKQ------------
        QKGE NVATSTRKFH+GSTSGTKSMPSSSGNKKWKKKKGGQGNKANL AAKT KK KAAKGICFHCNQEGHWKRNCPKYLAEK KAKQ            
Subjt:  QKGETNVATSTRKFHKGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLTAAKTNKKAKAAKGICFHCNQEGHWKRNCPKYLAEKNKAKQ------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------------------GKITRRPFT
                                                                                                   GK+T+RPFT
Subjt:  -------------------------------------------------------------------------------------------GKITRRPFT

Query:  GKGHRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
        GKGHRAKEPLELVHSDLCGPMNVKARG FEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVEN LSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Subjt:  GKGHRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS

Query:  QLSSPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFW-------------------------------------------------------------
        QLS+PGTPQQNGV ERRNRTLLDMVRSMMSYAHLPNSFW                                                             
Subjt:  QLSSPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFW-------------------------------------------------------------

Query:  ---GYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGWVTNLPI
           GYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKET EPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSG VTNLPI
Subjt:  ---GYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGWVTNLPI

Query:  YYMSLTETLTVISDGDIEDPLTFKKAMKDVDKDEWIKAINLELESI----------------------------------------LVAKGYTQVEGVDY
         YMSLTETLTVISDGDIEDPLTFKKAM+DVDKDEWIKA+NLELES+                                        LVAKGYTQVEGVDY
Subjt:  YYMSLTETLTVISDGDIEDPLTFKKAMKDVDKDEWIKAINLELESI----------------------------------------LVAKGYTQVEGVDY

Query:  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPC
        EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFII GQEQK+CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPC
Subjt:  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPC

Query:  VYKRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDRMELL----------------CLRNS-----VLRH-----
        VYKRIIN S+AFLVLYVDDILLIGND GLLTDIKQWL TQFQMK LGEAQFVL IQI RDR   +                 ++NS       RH     
Subjt:  VYKRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDRMELL----------------CLRNS-----VLRH-----

Query:  --------QDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGSKDLILTRYTDSDFQTDRDSRKS
                QDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGI+SRYQSNPGLA+WTA+KTILKYLRRTRDY LVYGSKDLILT YTDSDFQTDRDSRKS
Subjt:  --------QDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGSKDLILTRYTDSDFQTDRDSRKS

Query:  TSGSVFTLNGGAVVWRSIKQGCIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIECKYHLIREIVHR
        TSGSVFTLNGGAVVWRSIKQGCI DS MEAEYVAA EAAKEAVWLR FLIDLEVV N+SKPITLYCDNSGAVANS+EPRSHKR KHIE KYHLIREIVHR
Subjt:  TSGSVFTLNGGAVVWRSIKQGCIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIECKYHLIREIVHR

Query:  GDVIVTQIASTHNVADLFTKPLMAKVFEGHLESVGLRDMPHL
        GDVIVTQIASTHNVAD FTKPL AKVFEGHLES+GLRDMPHL
Subjt:  GDVIVTQIASTHNVADLFTKPLMAKVFEGHLESVGLRDMPHL

A0A5D3DS88 Gag/pol protein0.0e+0072.99Show/hide
Query:  MTSATLNMLAADKLNGNNYASWKNTTNTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
        MTSATLNMLAADKLNGNNYASWKNTTNTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
Subjt:  MTSATLNMLAADKLNGNNYASWKNTTNTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE

Query:  MFGQASYQIKHDALKYIYNARMNKEASVREHVLYMMVHFNVEKMNGAVIDEASQVSFILESLPESLLQFRSNAVMNKIAYTLTTLLSELQTFESLMKIKG
        MFGQASYQIKHDALKYIYNARMNKEASVREHVLYMMVHFNVEKMNGAVIDEASQVSFILESLPESLLQFRSNAVMNKIAYTLTTLL+ELQTFESLMKIKG
Subjt:  MFGQASYQIKHDALKYIYNARMNKEASVREHVLYMMVHFNVEKMNGAVIDEASQVSFILESLPESLLQFRSNAVMNKIAYTLTTLLSELQTFESLMKIKG

Query:  QKGETNVATSTRKFHKGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLTAAKTNKKAKAAKGICFHCNQEGHWKRNCPKYLAEKNKAKQ------------
        QKGE NVATSTRKFH+GSTSGTKSMPSSSGNKKWKKKKGGQGNKANL AAKT KK KAAKGICFHCNQEGHWKRNCPKYLAEK KAKQ            
Subjt:  QKGETNVATSTRKFHKGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLTAAKTNKKAKAAKGICFHCNQEGHWKRNCPKYLAEKNKAKQ------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------------------GKITRRPFT
                                                                                                   GK+T+RPFT
Subjt:  -------------------------------------------------------------------------------------------GKITRRPFT

Query:  GKGHRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
        GKGHRAKEPLELVHSDLCGPMNVKARG FEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVEN LSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Subjt:  GKGHRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS

Query:  QLSSPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFW-------------------------------------------------------------
        QLS+PGTPQQNGV ERRNRTLLDMVRSMMSYAHLPNSFW                                                             
Subjt:  QLSSPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFW-------------------------------------------------------------

Query:  ---GYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGWVTNLPI
           GYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKET EPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSG VTNLPI
Subjt:  ---GYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGWVTNLPI

Query:  YYMSLTETLTVISDGDIEDPLTFKKAMKDVDKDEWIKAINLELESI----------------------------------------LVAKGYTQVEGVDY
         YMSLTETLTVISDGDIEDPLTFKKAM+DVDKDEWIKA+NLELES+                                        LVAKGYTQVEGVDY
Subjt:  YYMSLTETLTVISDGDIEDPLTFKKAMKDVDKDEWIKAINLELESI----------------------------------------LVAKGYTQVEGVDY

Query:  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPC
        EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFII GQEQK+CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPC
Subjt:  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPC

Query:  VYKRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDRME------------LLCLRNSVLRHQDVEEMRHIPYASA
        VYKRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDR               L         QDVEEMRHIPYASA
Subjt:  VYKRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDRME------------LLCLRNSVLRHQDVEEMRHIPYASA

Query:  VGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGSKDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC
        VGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGSKDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC
Subjt:  VGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGSKDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC

Query:  IVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIECKYHLIREIVHRGDVIVTQIASTHNVADLFTKPL
        IVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIECKYHLIREIVHRGDVIVTQIASTHNVADLFTKPL
Subjt:  IVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIECKYHLIREIVHRGDVIVTQIASTHNVADLFTKPL

Query:  MAK
        MAK
Subjt:  MAK

SwissProt top hitse value%identityAlignment
P04146 Copia protein7.6e-8527.27Show/hide
Query:  KQGKITRRPFTGKGHRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKF
        KQ ++  +    K H  K PL +VHSD+CGP+      +  YF+ F D ++ Y   YL+++KS+    F+++ A+ E   +  +     D G EY+  + 
Subjt:  KQGKITRRPFTGKGHRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKF

Query:  QNYLMECGIVSQLSSPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFWG----------------------------------YPKGTR---------
        + + ++ GI   L+ P TPQ NGV ER  RT+ +  R+M+S A L  SFWG                                  Y K  R         
Subjt:  QNYLMECGIVSQLSSPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFWG----------------------------------YPKGTR---------

Query:  ----GGYFYD--------------------------------------------------------------PKDNKVFVST----------NATFLEED
             G F D                                                              P D++  + T          N  FL++ 
Subjt:  ----GGYFYD--------------------------------------------------------------PKDNKVFVST----------NATFLEED

Query:  HIREHK----PRSKIVLNELS------------KETIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGWVTNLPIYYMSLTETLTVIS-----
           E+K       KI+  E              K++ E +   + E     R  H+  S  +  P   RE   +  +  + I   +  + + +I+     
Subjt:  HIREHK----PRSKIVLNELS------------KETIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGWVTNLPIYYMSLTETLTVIS-----

Query:  ------------DGDI------------EDPLTFKKAMKDVDKDEWIKAINLEL----------------------------------------ESILVA
                    D  +            + P +F +     DK  W +AIN EL                                        ++ LVA
Subjt:  ------------DGDI------------EDPLTFKKAMKDVDKDEWIKAINLEL----------------------------------------ESILVA

Query:  KGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS
        +G+TQ   +DYEETF+PVA + S R +LS+   ++ ++ QMDVKTAFLNG L+E IYM+ P+G  I      VCKLN++IYGLKQA+R W   F+ A+K 
Subjt:  KGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS

Query:  YGFDQIVDEPCVY---KRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDRMELLCLRNSVLRH------------
          F     + C+Y   K  IN +I +++LYVDD+++   D   + + K++L+ +F+M  L E +  + I+I     ++   +++ ++             
Subjt:  YGFDQIVDEPCVY---KRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDRMELLCLRNSVLRH------------

Query:  -------------QDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGSKDLI----LTRYTDSDF
                      + +E  + P  S +G LMY MLCTRPD+  AV I+SRY S      W  +K +L+YL+ T D  L++  K+L     +  Y DSD+
Subjt:  -------------QDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGSKDLI----LTRYTDSDF

Query:  QTDRDSRKSTSGSVFTL-NGGAVVWRSIKQGCIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIECK
              RKST+G +F + +   + W + +Q  +  S  EAEY+A  EA +EA+WL KFL+   + + L  PI +Y DN G ++ +  P  HKR KHI+ K
Subjt:  QTDRDSRKSTSGSVFTL-NGGAVVWRSIKQGCIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIECK

Query:  YHLIREIVHRGDVIVTQIASTHNVADLFTKPLMAKVFEGHLESVGL
        YH  RE V    + +  I + + +AD+FTKPL A  F    + +GL
Subjt:  YHLIREIVHRGDVIVTQIASTHNVADLFTKPLMAKVFEGHLESVGL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-943.2e-13134.89Show/hide
Query:  GKITRRPFTGKGHRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKFQN
        GK  R  F     R    L+LV+SD+CGPM +++ G  +YF+TF DD SR  +VY+++ K +  + F+++ A VE    + +K  RSD GGEY   +F+ 
Subjt:  GKITRRPFTGKGHRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKFQN

Query:  YLMECGIVSQLSSPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFWG-----------------------------------------------YPKG
        Y    GI  + + PGTPQ NGV ER NRT+++ VRSM+  A LP SFWG                                                PK 
Subjt:  YLMECGIVSQLSSPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFWG-----------------------------------------------YPKG

Query:  TR--------------------GGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLN------------------------ELSKETIEPSTRVVEE
         R                    G   +DP   KV  S +  F  E  +R     S+ V N                        E+S++  +P   V+E+
Subjt:  TR--------------------GGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLN------------------------ELSKETIEPSTRVVEE

Query:  PSAL----TRVVHVGSSTRTHQPQSLREPRRSGWVTNLPIYYMSLTETLTVISDGDIEDPLTFKKAMKDVDKDEWIKAINLELESI--------------
           L      V H       HQP  LR   R       P        +   +   D  +P + K+ +   +K++ +KA+  E+ES+              
Subjt:  PSAL----TRVVHVGSSTRTHQPQSLREPRRSGWVTNLPIYYMSLTETLTVISDGDIEDPLTFKKAMKDVDKDEWIKAINLELESI--------------

Query:  --------------------------LVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQ
                                  LV KG+ Q +G+D++E FSPV  + SIR +LS+AA  D E+ Q+DVKTAFL+G+LEE IYM+QPEGF + G++ 
Subjt:  --------------------------LVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQ

Query:  KVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVY-KRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIR
         VCKLN+S+YGLKQA R W ++FD+ +KS  + +   +PCVY KR   N+   L+LYVDD+L++G D GL+  +K  L   F MK LG AQ +L ++I+R
Subjt:  KVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVY-KRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIR

Query:  DR----------------MELLCLRNS---------------VLRHQDVEE---MRHIPYASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAI
        +R                +E   ++N+                +    VEE   M  +PY+SAVGSLMYAM+CTRPDI +AVG++SR+  NPG  +W A+
Subjt:  DR----------------MELLCLRNS---------------VLRHQDVEE---MRHIPYASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAI

Query:  KTILKYLRRTRDYMLVYGSKDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLS
        K IL+YLR T    L +G  D IL  YTD+D   D D+RKS++G +FT +GGA+ W+S  Q C+  S  EAEY+AA+E  KE +WL++FL +L +     
Subjt:  KTILKYLRRTRDYMLVYGSKDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLS

Query:  KPITLYCDNSGAVANSKEPRSHKREKHIECKYHLIREIVHRGDVIVTQIASTHNVADLFTKPLMAKVFEGHLESVGL
        K   +YCD+  A+  SK    H R KHI+ +YH IRE+V    + V +I++  N AD+ TK +    FE   E VG+
Subjt:  KPITLYCDNSGAVANSKEPRSHKREKHIECKYHLIREIVHRGDVIVTQIASTHNVADLFTKPLMAKVFEGHLESVGL

P25600 Putative transposon Ty5-1 protein YCL074W1.8e-3031.92Show/hide
Query:  MDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINNSIAFLVLYVDDILLIGNDGGL
        MDV TAFLN  ++E IY++QP GF+       V +L   +YGLKQA   WN   +  +K  GF +   E  +Y R  ++   ++ +YVDD+L+      +
Subjt:  MDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINNSIAFLVLYVDDILLIGNDGGL

Query:  LTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDRME--LLCLRNSVLRHQDVEEMR---------------------HI----PYASAVGSLMYAMLCTRPD
           +KQ L   + MK LG+    L + I +       L L++ + +     E+                      H+    PY S VG L++     RPD
Subjt:  LTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDRME--LLCLRNSVLRHQDVEEMR---------------------HI----PYASAVGSLMYAMLCTRPD

Query:  ICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGS-KDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIK-QGCIVDSIMEAEYVA
        I Y V ++SR+   P   +  + + +L+YL  TR   L Y S   L LT Y D+      D   ST G V  L G  V W S K +G I     EAEY+ 
Subjt:  ICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGS-KDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIK-QGCIVDSIMEAEYVA

Query:  ASEAAKE
        ASE   E
Subjt:  ASEAAKE

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE19.7e-6434.9Show/hide
Query:  LVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNRSIYGLKQASRSWNIRFDTA
        LVAKGY Q  G+DY ETFSPV    SIRI+L +A    + I Q+DV  AFL G L + +YM QP GFI   +   VCKL +++YGLKQA R+W +     
Subjt:  LVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNRSIYGLKQASRSWNIRFDTA

Query:  IKSYGFDQIVDEPCVYKRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDR-----------MELLCLRNSVLRHQ
        + + GF   V +  ++      SI ++++YVDDIL+ GND  LL +    L  +F +K   E  + L I+  R             ++LL   N +    
Subjt:  IKSYGFDQIVDEPCVYKRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDR-----------MELLCLRNSVLRHQ

Query:  DVEEMRHIP---------------YASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDY-MLVYGSKDLILTRYTDSDFQT
            M   P               Y   VGSL Y +  TRPDI YAV  +S++   P   +  A+K IL+YL  T ++ + +     L L  Y+D+D+  
Subjt:  DVEEMRHIP---------------YASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDY-MLVYGSKDLILTRYTDSDFQT

Query:  DRDSRKSTSGSVFTLNGGAVVWRSIKQGCIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIECKYHL
        D+D   ST+G +  L    + W S KQ  +V S  EAEY + +  + E  W+   L +L +   L++P  +YCDN GA      P  H R KHI   YH 
Subjt:  DRDSRKSTSGSVFTLNGGAVVWRSIKQGCIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIECKYHL

Query:  IREIVHRGDVIVTQIASTHNVADLFTKPLMAKVFEGHLESVGLRDMP
        IR  V  G + V  +++   +AD  TKPL    F+     +G+  +P
Subjt:  IREIVHRGDVIVTQIASTHNVADLFTKPLMAKVFEGHLESVGLRDMP

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.0e-1731.54Show/hide
Query:  KITRRPFTGKGHRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKFQNY
        K  + PF+     +  PLE ++SD+     + +   + Y++ F D ++RY ++Y ++ KS+  E F  +K  +EN     I TF SD GGE++ L    Y
Subjt:  KITRRPFTGKGHRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKFQNY

Query:  LMECGIVSQLSSPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFWGY
          + GI    S P TP+ NG+ ER++R +++   +++S+A +P ++W Y
Subjt:  LMECGIVSQLSSPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFWGY

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.5e-6724.43Show/hide
Query:  PFTGKGHRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKFQNYLMECG
        PF+     + +PLE ++SD+     + +   + Y++ F D ++RY ++Y ++ KS+  + F  +K+ VEN     I T  SD GGE++ L+  +YL + G
Subjt:  PFTGKGHRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKFQNYLMECG

Query:  IVSQLSSPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFWGY--------------------------------------------------------
        I    S P TP+ NG+ ER++R +++M  +++S+A +P ++W Y                                                        
Subjt:  IVSQLSSPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFWGY--------------------------------------------------------

Query:  -----------------------PKGTRGGYFYDPKDNKVFVSTNATF---LEEDHIREHKPR----------------------------------SKI
                               P G      +   D + F  +   F     ++   +  P                                   S +
Subjt:  -----------------------PKGTRGGYFYDPKDNKVFVSTNATF---LEEDHIREHKPR----------------------------------SKI

Query:  VLNELSKETIEPSTRVVEEPSALTRVVHVG--SSTRTHQPQ-----------------SLREPRRSGWVTNLPIYYMSLTETLTVISDGDI---------
           ++S   +  S+      S  T   H G   + + HQ Q                 S   P ++  +   PI    +    T IS+ +          
Subjt:  VLNELSKETIEPSTRVVEEPSALTRVVHVG--SSTRTHQPQ-----------------SLREPRRSGWVTNLPIYYMSLTETLTVISDGDI---------

Query:  -------------------------------------------------EDPLTFKKAMKDVDKDEWIKAINLEL-------------------------
                                                          +P T  +AMKD   D W +A+  E+                         
Subjt:  -------------------------------------------------EDPLTFKKAMKDVDKDEWIKAINLEL-------------------------

Query:  ----------------ESILVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNR
                        ++ LVAKGY Q  G+DY ETFSPV    SIRI+L +A    + I Q+DV  AFL G L + +YM QP GF+   +   VC+L +
Subjt:  ----------------ESILVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNR

Query:  SIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQI----------
        +IYGLKQA R+W +   T + + GF   + +  ++      SI ++++YVDDIL+ GND  LL      L  +F +K   +  + L I+           
Subjt:  SIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQI----------

Query:  -IRDRMELLCLRNSVLRHQDVEEMRHIP---------------YASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDY-ML
          R  ++LL   N +        M   P               Y   VGSL Y +  TRPD+ YAV  +S+Y   P   +W A+K +L+YL  T D+ + 
Subjt:  -IRDRMELLCLRNSVLRHQDVEEMRHIP---------------YASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDY-ML

Query:  VYGSKDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVAN
        +     L L  Y+D+D+  D D   ST+G +  L    + W S KQ  +V S  EAEY + +  + E  W+   L +L +   LS P  +YCDN GA   
Subjt:  VYGSKDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVAN

Query:  SKEPRSHKREKHIECKYHLIREIVHRGDVIVTQIASTHNVADLFTKPLMAKVFEGHLESVGLRDMP
           P  H R KHI   YH IR  V  G + V  +++   +AD  TKPL    F+     +G+  +P
Subjt:  SKEPRSHKREKHIECKYHLIREIVHRGDVIVTQIASTHNVADLFTKPLMAKVFEGHLESVGLRDMP

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.1e-6235.87Show/hide
Query:  LVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQE----QKVCKLNRSIYGLKQASRSWNIR
        LVAKGYTQ EG+D+ ETFSPV  L S++++L+I+A +++ + Q+D+  AFLNG+L+E IYM+ P G+     +      VC L +SIYGLKQASR W ++
Subjt:  LVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQE----QKVCKLNRSIYGLKQASRSWNIR

Query:  FDTAIKSYGFDQIVDEPCVYKRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIR-----------------DRMELL
        F   +  +GF Q   +   + +I       +++YVDDI++  N+   + ++K  L + F+++ LG  ++ L ++I R                 D   LL
Subjt:  FDTAIKSYGFDQIVDEPCVYKRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIR-----------------DRMELL

Query:  -CLRNSVLRHQDVEEMRHI--------PYASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGSK-DLILTRYTDS
         C  +SV     V    H          Y   +G LMY  + TR DI +AV  +S++   P LA+  A+  IL Y++ T    L Y S+ ++ L  ++D+
Subjt:  -CLRNSVLRHQDVEEMRHI--------PYASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGSK-DLILTRYTDS

Query:  DFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIEC
         FQ+ +D+R+ST+G    L    + W+S KQ  +  S  EAEY A S A  E +WL +F  +L+  L LSKP  L+CDN+ A+  +     H+R KHIE 
Subjt:  DFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIEC

Query:  KYHLIRE
          H +RE
Subjt:  KYHLIRE

ATMG00240.1 Gag-Pol-related retrotransposon family protein8.8e-0434.72Show/hide
Query:  TRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVY-GSKDLILTRYTDSDFQTDRDSRKSTSG
        TRPD+ +AV  +S++ S    A   A+  +L Y++ T    L Y  + DL L  + DSD+ +  D+R+S +G
Subjt:  TRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVY-GSKDLILTRYTDSDFQTDRDSRKSTSG

ATMG00810.1 DNA/RNA polymerases superfamily protein2.9e-1530.43Show/hide
Query:  FLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDRMEL----------------------------LCLRNSV--LRHQDVEEMR
        +L+LYVDDILL G+   LL  +   L + F MK LG   + L IQI      L                            L L +SV   ++ D  + R
Subjt:  FLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDRMEL----------------------------LCLRNSV--LRHQDVEEMR

Query:  HIPYASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDY-MLVYGSKDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVV
             S VG+L Y  L TRPDI YAV I+ +    P LA +  +K +L+Y++ T  + + ++ +  L +  + DSD+     +R+ST+G    L    + 
Subjt:  HIPYASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDY-MLVYGSKDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVV

Query:  WRSIKQGCIVDSIMEAEYVAASEAAKEAVW
        W + +Q  +  S  E EY A +  A E  W
Subjt:  WRSIKQGCIVDSIMEAEYVAASEAAKEAVW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAGTGCTACTTTGAATATGCTGGCTGCTGATAAACTTAATGGCAATAATTATGCATCTTGGAAAAATACTACCAACACTGTGCTAATCATCGATGACCTTAGATT
TGTCCTAGTTGAGGAGTGTCCTCAAGTCCCAGCTGCTAATGCAACTCGAACTGTTCGAGAACCATATGAGCGCTGGGCCAAGGCAAATGAAAAAGCCCGAGCATACATCT
TGGCAAGCTTATCTGAAGTATTGGCCAAGAAACATGAATCAATGCTCACTGCTCGTGAGATTATGGACTCCTTGCAGGAGATGTTTGGTCAGGCCTCTTATCAGATCAAG
CATGATGCTCTAAAATACATTTATAATGCCCGTATGAATAAGGAAGCCTCAGTGCGAGAACATGTTCTCTATATGATGGTTCATTTCAACGTGGAAAAAATGAATGGGGC
TGTCATCGATGAAGCCAGTCAGGTTAGCTTTATTTTGGAATCTCTGCCAGAGAGTTTACTGCAATTTAGAAGCAATGCTGTTATGAATAAGATTGCTTATACCCTTACCA
CCCTTCTCAGCGAGCTACAGACTTTCGAGTCTCTGATGAAAATCAAGGGACAGAAGGGAGAGACAAATGTTGCTACTTCCACAAGAAAGTTCCATAAAGGTTCGACCTCT
GGAACTAAGTCTATGCCTTCTTCATCTGGCAATAAGAAGTGGAAGAAGAAGAAGGGTGGCCAAGGAAATAAAGCTAACCTCACTGCTGCTAAAACGAACAAGAAAGCCAA
GGCTGCAAAGGGAATATGTTTCCATTGCAACCAAGAGGGACATTGGAAGAGAAACTGTCCCAAGTACTTGGCAGAAAAGAATAAGGCCAAACAAGGTAAGATAACCAGAA
GACCTTTTACTGGAAAAGGTCATAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGAATTTGAATATTTCATC
ACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTGAAGTTGAAAACACATTAAG
TAAAACTATTAAAACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCATCACCTGGTA
CACCTCAACAGAATGGTGTACCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCGTTTTGGGGCTACCCCAAA
GGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGCAGTAA
GATAGTATTAAATGAACTTTCCAAAGAGACTATTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTAACAAGAGTTGTTCATGTCGGTTCATCTACTAGGACAC
ATCAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGTTGGGTTACAAACTTACCTATTTATTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGACATT
GAGGATCCATTGACTTTTAAGAAGGCAATGAAGGATGTGGATAAAGATGAATGGATCAAAGCTATTAATCTTGAATTGGAATCTATACTAGTGGCAAAGGGTTATACCCA
AGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACCTGTTGCCATGTTAAAGTCTATTCGAATACTTTTGTCCATTGCTGCATATTTTGACTATGAGATTTGGCAAATGG
ATGTGAAGACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCTAGGTCAAGAGCAAAAGGTTTGCAAGCTTAATCGT
TCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAG
AATCATCAACAATTCAATAGCTTTCTTAGTTCTGTACGTAGATGATATCTTACTCATTGGGAATGATGGAGGTTTACTAACTGACATCAAACAATGGCTAGTAACCCAAT
TTCAAATGAAAGGTTTGGGAGAGGCACAGTTTGTTCTGGATATTCAGATCATTAGAGATCGCATGGAGTTACTTTGTCTAAGGAACAGTGTCCTAAGACACCAAGACGTT
GAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGCGATGTTATGTACTAGACCTGACATCTGTTATGCGGTGGGGATAATCAGTAGATATCA
ATCTAATCCAGGATTAGCTTATTGGACTGCCATTAAAACTATCCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGTTCGAAGGATTTGATTCTTACAA
GATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTGTTCACCCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGA
TGTATTGTTGACTCCATTATGGAGGCAGAGTATGTTGCAGCTTCTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAAATTCTTGATTGATTTGGAAGTAGTTCTAAACCT
GTCAAAGCCAATTACTCTTTACTGTGATAATAGTGGGGCTGTGGCTAATTCTAAGGAGCCCAGAAGCCACAAGCGTGAAAAGCATATTGAGTGCAAGTATCACTTGATTC
GAGAGATAGTGCATCGTGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGTTGCTGATCTGTTTACAAAGCCCCTCATGGCTAAGGTGTTTGAGGGTCACCTA
GAGAGTGTGGGTTTACGTGACATGCCACATTTAATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGAGTGCTACTTTGAATATGCTGGCTGCTGATAAACTTAATGGCAATAATTATGCATCTTGGAAAAATACTACCAACACTGTGCTAATCATCGATGACCTTAGATT
TGTCCTAGTTGAGGAGTGTCCTCAAGTCCCAGCTGCTAATGCAACTCGAACTGTTCGAGAACCATATGAGCGCTGGGCCAAGGCAAATGAAAAAGCCCGAGCATACATCT
TGGCAAGCTTATCTGAAGTATTGGCCAAGAAACATGAATCAATGCTCACTGCTCGTGAGATTATGGACTCCTTGCAGGAGATGTTTGGTCAGGCCTCTTATCAGATCAAG
CATGATGCTCTAAAATACATTTATAATGCCCGTATGAATAAGGAAGCCTCAGTGCGAGAACATGTTCTCTATATGATGGTTCATTTCAACGTGGAAAAAATGAATGGGGC
TGTCATCGATGAAGCCAGTCAGGTTAGCTTTATTTTGGAATCTCTGCCAGAGAGTTTACTGCAATTTAGAAGCAATGCTGTTATGAATAAGATTGCTTATACCCTTACCA
CCCTTCTCAGCGAGCTACAGACTTTCGAGTCTCTGATGAAAATCAAGGGACAGAAGGGAGAGACAAATGTTGCTACTTCCACAAGAAAGTTCCATAAAGGTTCGACCTCT
GGAACTAAGTCTATGCCTTCTTCATCTGGCAATAAGAAGTGGAAGAAGAAGAAGGGTGGCCAAGGAAATAAAGCTAACCTCACTGCTGCTAAAACGAACAAGAAAGCCAA
GGCTGCAAAGGGAATATGTTTCCATTGCAACCAAGAGGGACATTGGAAGAGAAACTGTCCCAAGTACTTGGCAGAAAAGAATAAGGCCAAACAAGGTAAGATAACCAGAA
GACCTTTTACTGGAAAAGGTCATAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGAATTTGAATATTTCATC
ACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTGAAGTTGAAAACACATTAAG
TAAAACTATTAAAACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCATCACCTGGTA
CACCTCAACAGAATGGTGTACCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCGTTTTGGGGCTACCCCAAA
GGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGCAGTAA
GATAGTATTAAATGAACTTTCCAAAGAGACTATTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTAACAAGAGTTGTTCATGTCGGTTCATCTACTAGGACAC
ATCAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGTTGGGTTACAAACTTACCTATTTATTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGACATT
GAGGATCCATTGACTTTTAAGAAGGCAATGAAGGATGTGGATAAAGATGAATGGATCAAAGCTATTAATCTTGAATTGGAATCTATACTAGTGGCAAAGGGTTATACCCA
AGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACCTGTTGCCATGTTAAAGTCTATTCGAATACTTTTGTCCATTGCTGCATATTTTGACTATGAGATTTGGCAAATGG
ATGTGAAGACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCTAGGTCAAGAGCAAAAGGTTTGCAAGCTTAATCGT
TCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAG
AATCATCAACAATTCAATAGCTTTCTTAGTTCTGTACGTAGATGATATCTTACTCATTGGGAATGATGGAGGTTTACTAACTGACATCAAACAATGGCTAGTAACCCAAT
TTCAAATGAAAGGTTTGGGAGAGGCACAGTTTGTTCTGGATATTCAGATCATTAGAGATCGCATGGAGTTACTTTGTCTAAGGAACAGTGTCCTAAGACACCAAGACGTT
GAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGCGATGTTATGTACTAGACCTGACATCTGTTATGCGGTGGGGATAATCAGTAGATATCA
ATCTAATCCAGGATTAGCTTATTGGACTGCCATTAAAACTATCCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGTTCGAAGGATTTGATTCTTACAA
GATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTGTTCACCCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGA
TGTATTGTTGACTCCATTATGGAGGCAGAGTATGTTGCAGCTTCTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAAATTCTTGATTGATTTGGAAGTAGTTCTAAACCT
GTCAAAGCCAATTACTCTTTACTGTGATAATAGTGGGGCTGTGGCTAATTCTAAGGAGCCCAGAAGCCACAAGCGTGAAAAGCATATTGAGTGCAAGTATCACTTGATTC
GAGAGATAGTGCATCGTGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGTTGCTGATCTGTTTACAAAGCCCCTCATGGCTAAGGTGTTTGAGGGTCACCTA
GAGAGTGTGGGTTTACGTGACATGCCACATTTAATCTAG
Protein sequenceShow/hide protein sequence
MTSATLNMLAADKLNGNNYASWKNTTNTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIK
HDALKYIYNARMNKEASVREHVLYMMVHFNVEKMNGAVIDEASQVSFILESLPESLLQFRSNAVMNKIAYTLTTLLSELQTFESLMKIKGQKGETNVATSTRKFHKGSTS
GTKSMPSSSGNKKWKKKKGGQGNKANLTAAKTNKKAKAAKGICFHCNQEGHWKRNCPKYLAEKNKAKQGKITRRPFTGKGHRAKEPLELVHSDLCGPMNVKARGEFEYFI
TFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENTLSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSSPGTPQQNGVPERRNRTLLDMVRSMMSYAHLPNSFWGYPK
GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGWVTNLPIYYMSLTETLTVISDGDI
EDPLTFKKAMKDVDKDEWIKAINLELESILVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIILGQEQKVCKLNR
SIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINNSIAFLVLYVDDILLIGNDGGLLTDIKQWLVTQFQMKGLGEAQFVLDIQIIRDRMELLCLRNSVLRHQDV
EEMRHIPYASAVGSLMYAMLCTRPDICYAVGIISRYQSNPGLAYWTAIKTILKYLRRTRDYMLVYGSKDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQG
CIVDSIMEAEYVAASEAAKEAVWLRKFLIDLEVVLNLSKPITLYCDNSGAVANSKEPRSHKREKHIECKYHLIREIVHRGDVIVTQIASTHNVADLFTKPLMAKVFEGHL
ESVGLRDMPHLI