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IVF0013361 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013361
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr06:5613791..5614048
RNA-Seq ExpressionIVF0013361
SyntenyIVF0013361
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038042.1 hypothetical protein E6C27_scaffold36G002430 [Cucumis melo var. makuwa]6.94e-1348.05Show/hide
Query:  IRKPMEKGIKDIIKCQSNLQEMHLRSQKHLSNLSLKVDNANVNTKAQLNKLKGKMAKLKTKNQEFQTQLLAVREQNE
        I  P+++G +  +K + NL EMHLRSQK L +L LK DN+N + + Q+++ K KM  LKT NQE +T+L  +R+QNE
Subjt:  IRKPMEKGIKDIIKCQSNLQEMHLRSQKHLSNLSLKVDNANVNTKAQLNKLKGKMAKLKTKNQEFQTQLLAVREQNE

KAA0049656.1 hypothetical protein E6C27_scaffold163G001250 [Cucumis melo var. makuwa]1.79e-1250.79Show/hide
Query:  MDHYIRKPMEKGIKDIIKCQSNLQEMHLRSQKHLSNLSLKVDNANVNTKAQLNKLKGKMAKLK
        +D +I KP+E+G +D  +CQSNLQEM LRSQK +S+L LK+DNA+ + +AQ+++ + ++ KLK
Subjt:  MDHYIRKPMEKGIKDIIKCQSNLQEMHLRSQKHLSNLSLKVDNANVNTKAQLNKLKGKMAKLK

KGN45931.1 hypothetical protein Csa_004795 [Cucumis sativus]5.28e-1754.22Show/hide
Query:  MDHYIRKPMEKGIKDIIKCQSNLQEMHLRSQKHLSNLSLKVDNANVNTKAQLNKLKGKMAKLKTKNQEFQTQLLAVREQNEAM
        MD  I +PM +G +D IKCQ+ LQE  LRSQK +S+L  ++DNAN +TKAQLN+   K+ +L T+N E Q +LL V EQNEA+
Subjt:  MDHYIRKPMEKGIKDIIKCQSNLQEMHLRSQKHLSNLSLKVDNANVNTKAQLNKLKGKMAKLKTKNQEFQTQLLAVREQNEAM

KGN49653.1 hypothetical protein Csa_018510 [Cucumis sativus]4.76e-1147.89Show/hide
Query:  DHYIRKPMEKGIKDIIKCQSNLQEMHLRSQKHLSNLSLKVDNANVNTKAQLNKLKGKMAKLKTKNQEFQTQ
        D Y+ KPM  G +D I+CQSN QEMH +SQK L +  LK+DN N + + Q+  LK KM +L  + QE + Q
Subjt:  DHYIRKPMEKGIKDIIKCQSNLQEMHLRSQKHLSNLSLKVDNANVNTKAQLNKLKGKMAKLKTKNQEFQTQ

TYK07283.1 hypothetical protein E5676_scaffold606G001830 [Cucumis melo var. makuwa]4.13e-1243.59Show/hide
Query:  MDHYIRKPMEKGIKDIIKCQSNLQEMHLRSQKHLSNLSLKVDNANVNTKAQLNKLKGKMAKLKTKNQEFQTQLLAVRE
        +D Y+ KPM  G +D+I+CQSNLQ+MHL  QK L +  +K+ N N + +AQ+  LK +M +L+++NQE + Q+  + E
Subjt:  MDHYIRKPMEKGIKDIIKCQSNLQEMHLRSQKHLSNLSLKVDNANVNTKAQLNKLKGKMAKLKTKNQEFQTQLLAVRE

TrEMBL top hitse value%identityAlignment
A0A0A0KDS3 Uncharacterized protein2.2e-1254.12Show/hide
Query:  MDHYIRKPMEKGIKDIIKCQSNLQEMHLRSQKHLSNLSLKVDNANVNTKAQLNKLKGKMAKLKTKNQEFQTQLLAVREQNEAMKE
        MD  I +PM +G +D IKCQ+ LQE  LRSQK +S+L  ++DNAN +TKAQLN+   K+ +L T+N E Q +LL V EQNEA+ E
Subjt:  MDHYIRKPMEKGIKDIIKCQSNLQEMHLRSQKHLSNLSLKVDNANVNTKAQLNKLKGKMAKLKTKNQEFQTQLLAVREQNEAMKE

A0A0A0KJB9 Uncharacterized protein4.3e-0845.45Show/hide
Query:  DHYIRKPMEKGIKDIIKCQSNLQEMHLRSQKHLSNLSLKVDNANVNTKAQLNKLKGKMAKLKTKNQEFQTQLLAVRE
        D Y+ KPM  G +D I+CQSN QEMH +SQK L +  LK+DN N + + Q+  LK KM +L  + QE + Q   + E
Subjt:  DHYIRKPMEKGIKDIIKCQSNLQEMHLRSQKHLSNLSLKVDNANVNTKAQLNKLKGKMAKLKTKNQEFQTQLLAVRE

A0A5A7T3H5 Uncharacterized protein3.9e-0948.05Show/hide
Query:  IRKPMEKGIKDIIKCQSNLQEMHLRSQKHLSNLSLKVDNANVNTKAQLNKLKGKMAKLKTKNQEFQTQLLAVREQNE
        I  P+++G +  +K + NL EMHLRSQK L +L LK DN+N + + Q+++ K KM  LKT NQE +T+L  +R+QNE
Subjt:  IRKPMEKGIKDIIKCQSNLQEMHLRSQKHLSNLSLKVDNANVNTKAQLNKLKGKMAKLKTKNQEFQTQLLAVREQNE

A0A5D3C5U6 Uncharacterized protein3.9e-0941.18Show/hide
Query:  MDHYIRKPMEKGIKDIIKCQSNLQEMHLRSQKHLSNLSLKVDNANVNTKAQLNKLKGKMAKLKTKNQEFQTQLLAVREQNEAMKE
        +D Y+ KPM  G +D+I+CQSNLQ+MHL  QK L +  +K+ N N + +AQ+  LK +M +L+++NQE + Q+  + E  E + +
Subjt:  MDHYIRKPMEKGIKDIIKCQSNLQEMHLRSQKHLSNLSLKVDNANVNTKAQLNKLKGKMAKLKTKNQEFQTQLLAVREQNEAMKE

A0A5D3D645 Uncharacterized protein1.5e-0850.79Show/hide
Query:  MDHYIRKPMEKGIKDIIKCQSNLQEMHLRSQKHLSNLSLKVDNANVNTKAQLNKLKGKMAKLK
        +D +I KP+E+G +D  +CQSNLQEM LRSQK +S+L LK+DNA+ + +AQ+++ + ++ KLK
Subjt:  MDHYIRKPMEKGIKDIIKCQSNLQEMHLRSQKHLSNLSLKVDNANVNTKAQLNKLKGKMAKLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCACTACATCCGTAAACCAATGGAGAAAGGAATTAAAGATATAATCAAGTGCCAAAGCAACTTGCAAGAAATGCATCTACGAAGTCAAAAGCACTTGAGCAATTT
GTCACTAAAAGTGGACAACGCAAATGTTAACACAAAGGCACAATTAAATAAACTCAAGGGAAAAATGGCTAAGCTTAAAACAAAAAATCAGGAGTTCCAAACACAACTTC
TTGCAGTTAGGGAGCAAAACGAGGCGATGAAGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCACTACATCCGTAAACCAATGGAGAAAGGAATTAAAGATATAATCAAGTGCCAAAGCAACTTGCAAGAAATGCATCTACGAAGTCAAAAGCACTTGAGCAATTT
GTCACTAAAAGTGGACAACGCAAATGTTAACACAAAGGCACAATTAAATAAACTCAAGGGAAAAATGGCTAAGCTTAAAACAAAAAATCAGGAGTTCCAAACACAACTTC
TTGCAGTTAGGGAGCAAAACGAGGCGATGAAGGAATAA
Protein sequenceShow/hide protein sequence
MDHYIRKPMEKGIKDIIKCQSNLQEMHLRSQKHLSNLSLKVDNANVNTKAQLNKLKGKMAKLKTKNQEFQTQLLAVREQNEAMKE