; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0013372 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013372
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRWP-RK domain-containing protein
Genome locationchr06:17120252..17121071
RNA-Seq ExpressionIVF0013372
SyntenyIVF0013372
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR003035 - RWP-RK domain
IPR044607 - Transcription factor RKD-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050515.1 protein RKD4 [Cucumis melo var. makuwa]4.47e-7089.06Show/hide
Query:  GNNNGNKRRKGSFVLGLEEIRN----------KEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTI
        GNNNGNKRRKGSFVLGLEEIR           KE+NVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM LTNEVKGLEEHKRLLEEMPNMDLTHT+
Subjt:  GNNNGNKRRKGSFVLGLEEIRN----------KEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTI

Query:  KRLRQACFKANYKKNRRLRSNNIASLHH
        KRLRQACFKANYKKNRRLRSNNIASLHH
Subjt:  KRLRQACFKANYKKNRRLRSNNIASLHH

KAE8650549.1 hypothetical protein Csa_011321 [Cucumis sativus]4.16e-5981.1Show/hide
Query:  NNNGNKRRKGSFVLGLEEIRN----------KEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTIK
        NNNGNKRRK SFVLGLEEI+           KE+NVGLTVLKRRCRQLNIMRWPHRK KS NSLIQNVKEM LTNEVKGLEE KRLL E PNMDLTHT K
Subjt:  NNNGNKRRKGSFVLGLEEIRN----------KEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTIK

Query:  RLRQACFKANYKKNRRLRSNNIASLHH
        RLRQACFK  Y+KNRRLRSNNIASLHH
Subjt:  RLRQACFKANYKKNRRLRSNNIASLHH

TYK29190.1 protein RKD4 [Cucumis melo var. makuwa]1.56e-6889.06Show/hide
Query:  GNNNGNKRRKGSFVLGLEEIRN----------KEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTI
        GNNNGNKRRKGSFVLGLEEIR           KE+NVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM LTNEVKGLEEHKRLLEEMPNMDLTHT+
Subjt:  GNNNGNKRRKGSFVLGLEEIRN----------KEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTI

Query:  KRLRQACFKANYKKNRRLRSNNIASLHH
        KRLRQACFKANYKKNRRLRSNNIASLHH
Subjt:  KRLRQACFKANYKKNRRLRSNNIASLHH

XP_008466842.1 PREDICTED: protein RKD4 [Cucumis melo]1.34e-6889.06Show/hide
Query:  GNNNGNKRRKGSFVLGLEEIRN----------KEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTI
        GNNNGNKRRKGSFVLGLEEIR           KE+NVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM LTNEVKGLEEHKRLLEEMPNMDLTHT+
Subjt:  GNNNGNKRRKGSFVLGLEEIRN----------KEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTI

Query:  KRLRQACFKANYKKNRRLRSNNIASLHH
        KRLRQACFKANYKKNRRLRSNNIASLHH
Subjt:  KRLRQACFKANYKKNRRLRSNNIASLHH

XP_031738302.1 protein RKD4 [Cucumis sativus]1.03e-5781.1Show/hide
Query:  NNNGNKRRKGSFVLGLEEIRN----------KEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTIK
        NNNGNKRRK SFVLGLEEI+           KE+NVGLTVLKRRCRQLNIMRWPHRK KS NSLIQNVKEM LTNEVKGLEE KRLL E PNMDLTHT K
Subjt:  NNNGNKRRKGSFVLGLEEIRN----------KEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTIK

Query:  RLRQACFKANYKKNRRLRSNNIASLHH
        RLRQACFK  Y+KNRRLRSNNIASLHH
Subjt:  RLRQACFKANYKKNRRLRSNNIASLHH

TrEMBL top hitse value%identityAlignment
A0A0A0L6Q6 RWP-RK domain-containing protein3.4e-4581.1Show/hide
Query:  NNNGNKRRKGSFVLGLEEIRN----------KEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTIK
        NNNGNKRRK SFVLGLEEI+           KE+NVGLTVLKRRCRQLNIMRWPHRK KS NSLIQNVKEM LTNEVKGLEE KRLL E PNMDLTHT K
Subjt:  NNNGNKRRKGSFVLGLEEIRN----------KEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTIK

Query:  RLRQACFKANYKKNRRLRSNNIASLHH
        RLRQACFK  Y+KNRRLRSNNIASLHH
Subjt:  RLRQACFKANYKKNRRLRSNNIASLHH

A0A1S3CS47 protein RKD41.2e-5389.06Show/hide
Query:  GNNNGNKRRKGSFVLGLEEIRN----------KEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTI
        GNNNGNKRRKGSFVLGLEEIR           KE+NVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM LTNEVKGLEEHKRLLEEMPNMDLTHT+
Subjt:  GNNNGNKRRKGSFVLGLEEIRN----------KEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTI

Query:  KRLRQACFKANYKKNRRLRSNNIASLHH
        KRLRQACFKANYKKNRRLRSNNIASLHH
Subjt:  KRLRQACFKANYKKNRRLRSNNIASLHH

A0A5A7UAA0 Protein RKD41.2e-5389.06Show/hide
Query:  GNNNGNKRRKGSFVLGLEEIRN----------KEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTI
        GNNNGNKRRKGSFVLGLEEIR           KE+NVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM LTNEVKGLEEHKRLLEEMPNMDLTHT+
Subjt:  GNNNGNKRRKGSFVLGLEEIRN----------KEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTI

Query:  KRLRQACFKANYKKNRRLRSNNIASLHH
        KRLRQACFKANYKKNRRLRSNNIASLHH
Subjt:  KRLRQACFKANYKKNRRLRSNNIASLHH

A0A5D3E104 Protein RKD41.2e-5389.06Show/hide
Query:  GNNNGNKRRKGSFVLGLEEIRN----------KEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTI
        GNNNGNKRRKGSFVLGLEEIR           KE+NVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM LTNEVKGLEEHKRLLEEMPNMDLTHT+
Subjt:  GNNNGNKRRKGSFVLGLEEIRN----------KEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTI

Query:  KRLRQACFKANYKKNRRLRSNNIASLHH
        KRLRQACFKANYKKNRRLRSNNIASLHH
Subjt:  KRLRQACFKANYKKNRRLRSNNIASLHH

E5GBA6 Transcription factor1.2e-5389.06Show/hide
Query:  GNNNGNKRRKGSFVLGLEEIRN----------KEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTI
        GNNNGNKRRKGSFVLGLEEIR           KE+NVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM LTNEVKGLEEHKRLLEEMPNMDLTHT+
Subjt:  GNNNGNKRRKGSFVLGLEEIRN----------KEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTI

Query:  KRLRQACFKANYKKNRRLRSNNIASLHH
        KRLRQACFKANYKKNRRLRSNNIASLHH
Subjt:  KRLRQACFKANYKKNRRLRSNNIASLHH

SwissProt top hitse value%identityAlignment
O81791 Protein RKD57.1e-0834.69Show/hide
Query:  NKEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKE-------------MRLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNR
        ++ + VGLTVLK++CR+  I RWPHRK KSL+ LI +++              M +  + + LE  KR + + P M++    K+ RQ  FK  ++ +R
Subjt:  NKEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKE-------------MRLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNR

Q9CA66 Protein RKD22.6e-1851.52Show/hide
Query:  INVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM----------RLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANY--KKNRRLRSN
        +NVGLT+LKRRCR+L I RWPHRK  SLN+LI NVKE+          +L + ++ LE+ KR +E++P+++     KRLRQACFKAN+  KK R L+S+
Subjt:  INVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM----------RLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANY--KKNRRLRSN

Q9FGD1 Protein RKD31.3e-1741.8Show/hide
Query:  NNNGNKRRKGSFVLGLEEIRNKEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM-----------RLTNEVKGLEEHKRLLEEMPNMDLTHTI
        NN   +  K  F + + +   KE+N+G+T+LK+RCR+L I RWPHRK  SLN+LI N+K++           +L N ++ LE  K+++EE+P+++     
Subjt:  NNNGNKRRKGSFVLGLEEIRNKEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM-----------RLTNEVKGLEEHKRLLEEMPNMDLTHTI

Query:  KRLRQACFKANYKKNRRLRSNN
        KRLRQACFKA YK+ R   S++
Subjt:  KRLRQACFKANYKKNRRLRSNN

Q9LVU8 Protein RKD47.0e-2462.79Show/hide
Query:  KEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRRL
        KE+NVGLTVLK+RCR+L I RWPHRK KSLNSLI+N+K + +  EVK LEEH+ L+E+ P+ +L+   K+LRQACFKANYK+ + L
Subjt:  KEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRRL

Q9M9U9 Protein RKD12.0e-1849.47Show/hide
Query:  KEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM----------RLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRR
        +E+N+GLT+LK+RCR+L I RWPHRK  SL  LI NVKE+          +L N ++ LE+ K+ +E++P++      KRLRQACFKAN+K+ RR
Subjt:  KEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM----------RLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRR

Arabidopsis top hitse value%identityAlignment
AT1G18790.1 RWP-RK domain-containing protein1.4e-1949.47Show/hide
Query:  KEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM----------RLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRR
        +E+N+GLT+LK+RCR+L I RWPHRK  SL  LI NVKE+          +L N ++ LE+ K+ +E++P++      KRLRQACFKAN+K+ RR
Subjt:  KEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM----------RLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRR

AT1G74480.1 RWP-RK domain-containing protein1.8e-1951.52Show/hide
Query:  INVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM----------RLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANY--KKNRRLRSN
        +NVGLT+LKRRCR+L I RWPHRK  SLN+LI NVKE+          +L + ++ LE+ KR +E++P+++     KRLRQACFKAN+  KK R L+S+
Subjt:  INVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM----------RLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANY--KKNRRLRSN

AT4G35590.1 RWP-RK domain-containing protein5.0e-0934.69Show/hide
Query:  NKEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKE-------------MRLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNR
        ++ + VGLTVLK++CR+  I RWPHRK KSL+ LI +++              M +  + + LE  KR + + P M++    K+ RQ  FK  ++ +R
Subjt:  NKEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKE-------------MRLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNR

AT5G53040.1 RWP-RK domain-containing protein5.0e-2562.79Show/hide
Query:  KEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRRL
        KE+NVGLTVLK+RCR+L I RWPHRK KSLNSLI+N+K + +  EVK LEEH+ L+E+ P+ +L+   K+LRQACFKANYK+ + L
Subjt:  KEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRRL

AT5G66990.1 RWP-RK domain-containing protein9.1e-1941.8Show/hide
Query:  NNNGNKRRKGSFVLGLEEIRNKEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM-----------RLTNEVKGLEEHKRLLEEMPNMDLTHTI
        NN   +  K  F + + +   KE+N+G+T+LK+RCR+L I RWPHRK  SLN+LI N+K++           +L N ++ LE  K+++EE+P+++     
Subjt:  NNNGNKRRKGSFVLGLEEIRNKEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM-----------RLTNEVKGLEEHKRLLEEMPNMDLTHTI

Query:  KRLRQACFKANYKKNRRLRSNN
        KRLRQACFKA YK+ R   S++
Subjt:  KRLRQACFKANYKKNRRLRSNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAATCTGACTCCTACTGCTACCGTGATGCTAATTCCAACCATGCTGCAACATCTGACGCCGACTTCTTCTCTAAAGGAAATAATAATGGGAATAAGAGGAGAAA
AGGTAGTTTTGTGTTAGGATTGGAAGAGATTCGAAACAAAGAGATAAATGTTGGTTTGACAGTGCTTAAAAGAAGATGTAGACAACTTAATATCATGAGATGGCCTCATA
GAAAACATAAGAGCTTAAATTCTCTCATCCAAAATGTGAAGGAAATGAGGTTAACAAATGAGGTAAAAGGGTTGGAGGAGCACAAGAGGCTATTGGAGGAAATGCCAAAT
ATGGACCTCACCCATACAATCAAAAGGCTAAGGCAAGCTTGCTTCAAAGCCAATTACAAGAAAAACAGAAGACTTAGGTCCAATAATATTGCTTCTCTTCATCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAAATCTGACTCCTACTGCTACCGTGATGCTAATTCCAACCATGCTGCAACATCTGACGCCGACTTCTTCTCTAAAGGAAATAATAATGGGAATAAGAGGAGAAA
AGGTAGTTTTGTGTTAGGATTGGAAGAGATTCGAAACAAAGAGATAAATGTTGGTTTGACAGTGCTTAAAAGAAGATGTAGACAACTTAATATCATGAGATGGCCTCATA
GAAAACATAAGAGCTTAAATTCTCTCATCCAAAATGTGAAGGAAATGAGGTTAACAAATGAGGTAAAAGGGTTGGAGGAGCACAAGAGGCTATTGGAGGAAATGCCAAAT
ATGGACCTCACCCATACAATCAAAAGGCTAAGGCAAGCTTGCTTCAAAGCCAATTACAAGAAAAACAGAAGACTTAGGTCCAATAATATTGCTTCTCTTCATCACTAA
Protein sequenceShow/hide protein sequence
MSKSDSYCYRDANSNHAATSDADFFSKGNNNGNKRRKGSFVLGLEEIRNKEINVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPN
MDLTHTIKRLRQACFKANYKKNRRLRSNNIASLHH