; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0013378 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013378
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionflowering-promoting factor 1-like protein 2
Genome locationchr04:2662773..2663159
RNA-Seq ExpressionIVF0013378
SyntenyIVF0013378
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
InterPro domainsIPR039274 - Flowering-promoting factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136318.1 flowering-promoting factor 1-like protein 2 [Cucumis sativus]4.10e-3458.33Show/hide
Query:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGH-HQHHHHHHHHHGGGGGAEERRFWFIFHRDNRFTPISSNFITII-------------------H-----D
        MSGVWVFRSNGVMRLVENSQAGDDYSSDGH HQHHHH     GGGGG ++     + H  +     S  F+  I                   H     D
Subjt:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGH-HQHHHHHHHHHGGGGGAEERRFWFIFHRDNRFTPISSNFITII-------------------H-----D

Query:  LISLPMDFSKFNSIYMYDLVVKNPNVFHVREP
        LISLPMDFSKFNSIYM+DLV+KNPNVFHVREP
Subjt:  LISLPMDFSKFNSIYMYDLVVKNPNVFHVREP

XP_008466327.1 PREDICTED: flowering-promoting factor 1-like protein 2 [Cucumis melo]1.81e-4364.12Show/hide
Query:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGGGGAEERRFWFIFHRDNRFTPISSNFITII-------------------H-----DL
        MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGGGG   ++   + H  +     S  F+  I                   H     DL
Subjt:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGGGGAEERRFWFIFHRDNRFTPISSNFITII-------------------H-----DL

Query:  ISLPMDFSKFNSIYMYDLVVKNPNVFHVREP
        ISLPMDFSKFNSIYMYDLVVKNPNVFHVREP
Subjt:  ISLPMDFSKFNSIYMYDLVVKNPNVFHVREP

XP_022937028.1 flowering-promoting factor 1-like protein 2 [Cucurbita moschata]9.03e-3356.49Show/hide
Query:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGGGGAEERRFWFIFHRDNRFTPISSNFITII-------------------H-----DL
        MSGVWVFRSNGVMRLVEN+QAG DYSSDGHH HHHH       GGG ++     + H  +     S  F+  I                   H     DL
Subjt:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGGGGAEERRFWFIFHRDNRFTPISSNFITII-------------------H-----DL

Query:  ISLPMDFSKFNSIYMYDLVVKNPNVFHVREP
        ISLPMDFSKFNSIYMYDLVVKNPNVFHVREP
Subjt:  ISLPMDFSKFNSIYMYDLVVKNPNVFHVREP

XP_023536365.1 flowering-promoting factor 1-like protein 2 [Cucurbita pepo subsp. pepo]1.14e-3356.2Show/hide
Query:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGG-------------------------GGAEERRF-----WFIFHRDNRFTPISSNFI
        MSGVWVFRSNGVMRLVEN+QAG DYSSDGHH   HHHHHH+GGG                         G   ER +     +F FH+ +          
Subjt:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGG-------------------------GGAEERRF-----WFIFHRDNRFTPISSNFI

Query:  TIIHDLISLPMDFSKFNSIYMYDLVVKNPNVFHVREP
            DLISLPMDFSKFNSIYMYDLVVKNPNVFHVREP
Subjt:  TIIHDLISLPMDFSKFNSIYMYDLVVKNPNVFHVREP

XP_038899381.1 flowering-promoting factor 1-like protein 2 [Benincasa hispida]1.82e-3257.25Show/hide
Query:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGGGGAEERRFWFIFHRDNRFTPISSNFITII-------------------H-----DL
        MSGVWVFRSNGVMRLVENSQAGDDYSSDGHH      H HH  GGG ++     + H  +  T  S  F+  I                   H     DL
Subjt:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGGGGAEERRFWFIFHRDNRFTPISSNFITII-------------------H-----DL

Query:  ISLPMDFSKFNSIYMYDLVVKNPNVFHVREP
        ISLPMDFSKFNSIYMYDLV+KNPNVFHVREP
Subjt:  ISLPMDFSKFNSIYMYDLVVKNPNVFHVREP

TrEMBL top hitse value%identityAlignment
A0A0A0LHE6 Uncharacterized protein2.9e-2557.25Show/hide
Query:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGGGGAEERRFWFIFHRDNRFTPISSNFITII------------------------HDL
        MSGVWVFRSNGVMRLVENSQAGDDYSSDG    H H HHHHGGGGG ++     + H  +     S  F+  I                         DL
Subjt:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGGGGAEERRFWFIFHRDNRFTPISSNFITII------------------------HDL

Query:  ISLPMDFSKFNSIYMYDLVVKNPNVFHVREP
        ISLPMDFSKFNSIYM+DLV+KNPNVFHVREP
Subjt:  ISLPMDFSKFNSIYMYDLVVKNPNVFHVREP

A0A1S3CSB1 flowering-promoting factor 1-like protein 21.8e-3263.36Show/hide
Query:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGGGGAEERRFWFIFHRDNRFTPISSNFITII------------------------HDL
        MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGGGG   ++   + H  +     S  F+  I                         DL
Subjt:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGGGGAEERRFWFIFHRDNRFTPISSNFITII------------------------HDL

Query:  ISLPMDFSKFNSIYMYDLVVKNPNVFHVREP
        ISLPMDFSKFNSIYMYDLVVKNPNVFHVREP
Subjt:  ISLPMDFSKFNSIYMYDLVVKNPNVFHVREP

A0A5A7UF14 Flowering-promoting factor 1-like protein 21.8e-3263.36Show/hide
Query:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGGGGAEERRFWFIFHRDNRFTPISSNFITII------------------------HDL
        MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGGGG   ++   + H  +     S  F+  I                         DL
Subjt:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGGGGAEERRFWFIFHRDNRFTPISSNFITII------------------------HDL

Query:  ISLPMDFSKFNSIYMYDLVVKNPNVFHVREP
        ISLPMDFSKFNSIYMYDLVVKNPNVFHVREP
Subjt:  ISLPMDFSKFNSIYMYDLVVKNPNVFHVREP

A0A6J1FEW7 flowering-promoting factor 1-like protein 22.4e-2455.47Show/hide
Query:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGG-------------------------GGAEERRF-----WFIFHRDNRFTPISSNFI
        MSGVWVFRSNGVMRLVEN+QAG DYSSDG    HHHHHHH+GGG                         G   ER +     +F FH+ +          
Subjt:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGG-------------------------GGAEERRF-----WFIFHRDNRFTPISSNFI

Query:  TIIHDLISLPMDFSKFNSIYMYDLVVKNPNVFHVREP
            DLISLPMDFSKFNSIYMYDLVVKNPNVFHVREP
Subjt:  TIIHDLISLPMDFSKFNSIYMYDLVVKNPNVFHVREP

A0A6J1IMX4 flowering-promoting factor 1-like protein 27.8e-2354.01Show/hide
Query:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGG-------------------------GGAEERRF-----WFIFHRDNRFTPISSNFI
        MSGVWVFRSNGVMRLVEN+QAG DYSSDG      HHHHH+GGG                         G   ER +     +F FH+ +          
Subjt:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGG-------------------------GGAEERRF-----WFIFHRDNRFTPISSNFI

Query:  TIIHDLISLPMDFSKFNSIYMYDLVVKNPNVFHVREP
            DLISLPMDFSKFNSIYMYDLVVKNPNVFHVREP
Subjt:  TIIHDLISLPMDFSKFNSIYMYDLVVKNPNVFHVREP

SwissProt top hitse value%identityAlignment
O23624 Flowering-promoting factor 14.0e-0840.8Show/hide
Query:  MSGVWVFRSNGVMRLVEN-SQAGDD---------YSSDGHHQHHHH---------HHHHHGGGGGAEERRFWFIFHRDNRFTPISSNFITIIHDLISLPM
        MSGVWVF+ NGV+RLVEN +Q+G D         Y   G     +              + GGG  +  +    FH+ +              DLISLP 
Subjt:  MSGVWVFRSNGVMRLVEN-SQAGDD---------YSSDGHHQHHHH---------HHHHHGGGGGAEERRFWFIFHRDNRFTPISSNFITIIHDLISLPM

Query:  DFSKFNSIYMYDLVVKNPNVFHVRE
        DF+KFNS+YMYD+VVKNPN FHVR+
Subjt:  DFSKFNSIYMYDLVVKNPNVFHVRE

O24340 Flowering-promoting factor 12.6e-0740Show/hide
Query:  MSGVWVFRSNGVMRLVEN-SQAGDD---------YSSDGHHQHHHH---------HHHHHGGGGGAEERRFWFIFHRDNRFTPISSNFITIIHDLISLPM
        MSGVWVF+ NGV+RLVEN +Q+G D         Y   G     +              + GGG  +  +    FH+ +              DLISLP 
Subjt:  MSGVWVFRSNGVMRLVEN-SQAGDD---------YSSDGHHQHHHH---------HHHHHGGGGGAEERRFWFIFHRDNRFTPISSNFITIIHDLISLPM

Query:  DFSKFNSIYMYDLVVKNPNVFHVRE
        DF+KF+S+YMYD+VVKNPN FHVR+
Subjt:  DFSKFNSIYMYDLVVKNPNVFHVRE

Q5Q0B3 Flowering-promoting factor 1-like protein 16.6e-1144.72Show/hide
Query:  MSGVWVFRSNGVMRLVE---NSQAGD--DYSSDGHHQHH--------HHHHHHHGGGGGAEERRF----WFIFHRDNRFTPISSNFITIIHDLISLPMDF
        MSGVWVF  NGVMRLVE   N  AGD  + SS G +Q          H          G+ E+      W  ++  +    +         DLISLP DF
Subjt:  MSGVWVFRSNGVMRLVE---NSQAGD--DYSSDGHHQHH--------HHHHHHHGGGGGAEERRF----WFIFHRDNRFTPISSNFITIIHDLISLPMDF

Query:  SKFNSIYMYDLVVKNPNVFHVRE
        SKFNSI+MYD+VVKNPNVFHVR+
Subjt:  SKFNSIYMYDLVVKNPNVFHVRE

Q8LR63 Flowering-promoting factor 1-like protein 21.7e-0634.33Show/hide
Query:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGGGGAEERR-------------------------FWFIFHRDNRFTPISSNFITIIH-
        MSGVWVFR NGV++LVEN  A  +    G            GGGGG   RR                          W  ++        ++  +   H 
Subjt:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGGGGAEERR-------------------------FWFIFHRDNRFTPISSNFITIIH-

Query:  ----DLISLPMDFSKFNSIYMYDLVVKNPNVFHV
            DLISLP DFS+F S++MYD+VVKN + F V
Subjt:  ----DLISLPMDFSKFNSIYMYDLVVKNPNVFHV

Q9LXB5 Flowering-promoting factor 1-like protein 23.1e-0843.24Show/hide
Query:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGGGGAEERRFWFIFHRD-NRFTPISSNFITIIH----DLISLPMDFSKFNSIYMYDLV
        MSGVWVF +NGV+RLVEN       S+  H + +   +   G    +       +      R+    S+ I        DLISLP DFSKFNS+YMYD+V
Subjt:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGGGGAEERRFWFIFHRD-NRFTPISSNFITIIH----DLISLPMDFSKFNSIYMYDLV

Query:  VKNPNVFHVRE
        VKNPN FHVR+
Subjt:  VKNPNVFHVRE

Arabidopsis top hitse value%identityAlignment
AT4G31380.1 FPF1-like protein 14.7e-1244.72Show/hide
Query:  MSGVWVFRSNGVMRLVE---NSQAGD--DYSSDGHHQHH--------HHHHHHHGGGGGAEERRF----WFIFHRDNRFTPISSNFITIIHDLISLPMDF
        MSGVWVF  NGVMRLVE   N  AGD  + SS G +Q          H          G+ E+      W  ++  +    +         DLISLP DF
Subjt:  MSGVWVFRSNGVMRLVE---NSQAGD--DYSSDGHHQHH--------HHHHHHHGGGGGAEERRF----WFIFHRDNRFTPISSNFITIIHDLISLPMDF

Query:  SKFNSIYMYDLVVKNPNVFHVRE
        SKFNSI+MYD+VVKNPNVFHVR+
Subjt:  SKFNSIYMYDLVVKNPNVFHVRE

AT5G10625.1 BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1)2.2e-0943.24Show/hide
Query:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGGGGAEERRFWFIFHRD-NRFTPISSNFITIIH----DLISLPMDFSKFNSIYMYDLV
        MSGVWVF +NGV+RLVEN       S+  H + +   +   G    +       +      R+    S+ I        DLISLP DFSKFNS+YMYD+V
Subjt:  MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGGGGAEERRFWFIFHRD-NRFTPISSNFITIIH----DLISLPMDFSKFNSIYMYDLV

Query:  VKNPNVFHVRE
        VKNPN FHVR+
Subjt:  VKNPNVFHVRE

AT5G24860.1 flowering promoting factor 12.8e-0940.8Show/hide
Query:  MSGVWVFRSNGVMRLVEN-SQAGDD---------YSSDGHHQHHHH---------HHHHHGGGGGAEERRFWFIFHRDNRFTPISSNFITIIHDLISLPM
        MSGVWVF+ NGV+RLVEN +Q+G D         Y   G     +              + GGG  +  +    FH+ +              DLISLP 
Subjt:  MSGVWVFRSNGVMRLVEN-SQAGDD---------YSSDGHHQHHHH---------HHHHHGGGGGAEERRFWFIFHRDNRFTPISSNFITIIHDLISLPM

Query:  DFSKFNSIYMYDLVVKNPNVFHVRE
        DF+KFNS+YMYD+VVKNPN FHVR+
Subjt:  DFSKFNSIYMYDLVVKNPNVFHVRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGGCGTTTGGGTGTTCCGATCCAACGGCGTTATGCGTCTCGTCGAAAACTCTCAAGCCGGCGACGATTACTCCTCCGACGGTCACCACCAGCATCACCACCACCA
CCACCACCACCACGGCGGCGGTGGTGGCGCGGAAGAAAGAAGGTTCTGGTTCATCTTCCATCGGGACAACCGGTTTACCCCGATTTCTTCCAATTTCATAACGATCATCC
ATGATCTCATTTCTCTCCCAATGGATTTCTCCAAATTTAATTCCATTTATATGTACGATCTCGTCGTCAAAAACCCTAACGTCTTTCACGTTAGAGAACCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGGCGTTTGGGTGTTCCGATCCAACGGCGTTATGCGTCTCGTCGAAAACTCTCAAGCCGGCGACGATTACTCCTCCGACGGTCACCACCAGCATCACCACCACCA
CCACCACCACCACGGCGGCGGTGGTGGCGCGGAAGAAAGAAGGTTCTGGTTCATCTTCCATCGGGACAACCGGTTTACCCCGATTTCTTCCAATTTCATAACGATCATCC
ATGATCTCATTTCTCTCCCAATGGATTTCTCCAAATTTAATTCCATTTATATGTACGATCTCGTCGTCAAAAACCCTAACGTCTTTCACGTTAGAGAACCCTAA
Protein sequenceShow/hide protein sequence
MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGGGGAEERRFWFIFHRDNRFTPISSNFITIIHDLISLPMDFSKFNSIYMYDLVVKNPNVFHVREP