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IVF0013404 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013404
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr09:6546673..6546879
RNA-Seq ExpressionIVF0013404
SyntenyIVF0013404
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050190.1 retrotransposon protein [Cucumis melo var. makuwa]4.71e-2877.94Show/hide
Query:  MSQENVRASRPSHASEGRTRSSGSKRKRGSQRDGELELIHIALECTNDQFRTIAEWPTRALANDNHMR
        MSQE+VRASRPSH S+GR RSSGSKRKR SQ+ GE+E+IH+A+ECTNDQ RTIAEWP RALAND H+R
Subjt:  MSQENVRASRPSHASEGRTRSSGSKRKRGSQRDGELELIHIALECTNDQFRTIAEWPTRALANDNHMR

KAA0053857.1 retrotransposon protein [Cucumis melo var. makuwa]3.76e-2573.53Show/hide
Query:  MSQENVRASRPSHASEGRTRSSGSKRKRGSQRDGELELIHIALECTNDQFRTIAEWPTRALANDNHMR
        +SQ++VRASRPS AS+GRT SSGSKRKRGSQRD ELE IH+AL+ TN+Q R IA+WP R LANDNH+R
Subjt:  MSQENVRASRPSHASEGRTRSSGSKRKRGSQRDGELELIHIALECTNDQFRTIAEWPTRALANDNHMR

KAA0067987.1 retrotransposon protein [Cucumis melo var. makuwa]1.95e-2679.41Show/hide
Query:  MSQENVRASRPSHASEGRTRSSGSKRKRGSQRDGELELIHIALECTNDQFRTIAEWPTRALANDNHMR
        +SQ++VRASRPS ASEGRTRSSGSKRKRGSQRD ELE IH+AL+ TN+Q R IAEWPTR LANDNH+R
Subjt:  MSQENVRASRPSHASEGRTRSSGSKRKRGSQRDGELELIHIALECTNDQFRTIAEWPTRALANDNHMR

TYK01823.1 retrotransposon protein [Cucumis melo var. makuwa]1.32e-2575Show/hide
Query:  MSQENVRASRPSHASEGRTRSSGSKRKRGSQRDGELELIHIALECTNDQFRTIAEWPTRALANDNHMR
        +SQ++VRASRPS ASEGRTRSSGSKRKRGSQRD ELE IH+AL+ TN+Q R I EWP   LANDNH+R
Subjt:  MSQENVRASRPSHASEGRTRSSGSKRKRGSQRDGELELIHIALECTNDQFRTIAEWPTRALANDNHMR

TYK30971.1 retrotransposon protein [Cucumis melo var. makuwa]1.99e-2575Show/hide
Query:  MSQENVRASRPSHASEGRTRSSGSKRKRGSQRDGELELIHIALECTNDQFRTIAEWPTRALANDNHMR
        +SQ++VRASRPS ASEGRTRSSGSKRKRGSQRD ++E IH+AL+ TN+Q R IAEWP R LANDNH+R
Subjt:  MSQENVRASRPSHASEGRTRSSGSKRKRGSQRDGELELIHIALECTNDQFRTIAEWPTRALANDNHMR

TrEMBL top hitse value%identityAlignment
A0A5A7U4I8 Retrotransposon protein7.9e-2177.94Show/hide
Query:  MSQENVRASRPSHASEGRTRSSGSKRKRGSQRDGELELIHIALECTNDQFRTIAEWPTRALANDNHMR
        MSQE+VRASRPSH S+GR RSSGSKRKR SQ+ GE+E+IH+A+ECTNDQ RTIAEWP RALAND H+R
Subjt:  MSQENVRASRPSHASEGRTRSSGSKRKRGSQRDGELELIHIALECTNDQFRTIAEWPTRALANDNHMR

A0A5A7UD16 Retrotransposon protein9.7e-1975Show/hide
Query:  MSQENVRASRPSHASEGRTRSSGSKRKRGSQRDGELELIHIALECTNDQFRTIAEWPTRALANDNHMR
        +SQ++VRASRPSHASEGRT SSGSKRKRG+QRD ++E IH+AL+ TN+Q R IAEWP RALANDNH+R
Subjt:  MSQENVRASRPSHASEGRTRSSGSKRKRGSQRDGELELIHIALECTNDQFRTIAEWPTRALANDNHMR

A0A5A7VHE7 Retrotransposon protein4.3e-1977.94Show/hide
Query:  MSQENVRASRPSHASEGRTRSSGSKRKRGSQRDGELELIHIALECTNDQFRTIAEWPTRALANDNHMR
        +SQ+NVRASRPS ASEGRT SSGSKRKRGSQRD ELE IH+AL+ TN+Q R IAEWP R LANDNH+R
Subjt:  MSQENVRASRPSHASEGRTRSSGSKRKRGSQRDGELELIHIALECTNDQFRTIAEWPTRALANDNHMR

A0A5A7VL88 Retrotransposon protein5.1e-2079.41Show/hide
Query:  MSQENVRASRPSHASEGRTRSSGSKRKRGSQRDGELELIHIALECTNDQFRTIAEWPTRALANDNHMR
        +SQ++VRASRPS ASEGRTRSSGSKRKRGSQRD ELE IH+AL+ TN+Q R IAEWPTR LANDNH+R
Subjt:  MSQENVRASRPSHASEGRTRSSGSKRKRGSQRDGELELIHIALECTNDQFRTIAEWPTRALANDNHMR

A0A5D3DQQ3 Retrotransposon protein4.3e-1977.94Show/hide
Query:  MSQENVRASRPSHASEGRTRSSGSKRKRGSQRDGELELIHIALECTNDQFRTIAEWPTRALANDNHMR
        +SQ+NVRASRPS ASEGRT SSGSKRKRGSQRD ELE IH+AL+ TN+Q R IAEWP R LANDNH+R
Subjt:  MSQENVRASRPSHASEGRTRSSGSKRKRGSQRDGELELIHIALECTNDQFRTIAEWPTRALANDNHMR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCAGGAGAATGTACGTGCATCACGACCTTCTCACGCATCAGAGGGTAGGACCAGATCGAGCGGATCTAAGAGGAAGAGGGGAAGCCAGCGAGATGGCGAGCTTGA
ACTCATACATATAGCCCTCGAGTGTACGAACGACCAATTCAGGACGATTGCGGAGTGGCCTACACGCGCCCTTGCCAATGACAATCATATGCGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCCAGGAGAATGTACGTGCATCACGACCTTCTCACGCATCAGAGGGTAGGACCAGATCGAGCGGATCTAAGAGGAAGAGGGGAAGCCAGCGAGATGGCGAGCTTGA
ACTCATACATATAGCCCTCGAGTGTACGAACGACCAATTCAGGACGATTGCGGAGTGGCCTACACGCGCCCTTGCCAATGACAATCATATGCGCTAG
Protein sequenceShow/hide protein sequence
MSQENVRASRPSHASEGRTRSSGSKRKRGSQRDGELELIHIALECTNDQFRTIAEWPTRALANDNHMR