CuGenDBv2

Gene ID	IVF0013407
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	40S ribosomal protein S25
Genome location	chr08:17637100..17640900
RNA-Seq Expression	IVF0013407
Synteny	IVF0013407
Gene Ontology terms	GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR004977 - Ribosomal protein S25

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004144662.1 40S ribosomal protein S25-2 [Cucumis sativus]

2.58e-64

97.22

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKL+SEAPKFKLITP+I+SDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

XP_004291591.1 PREDICTED: 40S ribosomal protein S25-2 [Fragaria vesca subsp. vesca]

3.67e-64

97.22

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Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIR+ISAH+SQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

XP_008442240.1 PREDICTED: 40S ribosomal protein S25-2 [Cucumis melo]

1.55e-65

100

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Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

XP_008456601.1 PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo]

5.21e-64

96.3

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Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSE PK+KL+TPSILSDRLRINGSLARRAIKDLMARGSIR+ISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

XP_022142384.1 40S ribosomal protein S25-2 [Momordica charantia]

1.28e-64

98.15

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Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNN+VLFDQGTYDKLLSEAPK+KLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KYW1 40S ribosomal protein S25

1.6e-47

97.22

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKL+SEAPKFKLITP+I+SDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

A0A1S3B608 40S ribosomal protein S25

1.9e-48

100

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

A0A5D3CKR9 40S ribosomal protein S25

2.7e-47

96.3

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSE PK+KL+TPSILSDRLRINGSLARRAIKDLMARGSIR+ISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

A0A6J1BYI5 40S ribosomal protein S25

2.7e-47

96.3

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSE PK+KL+TPSILSDRLRINGSLARRAIKDLMARGSIR+ISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

A0A6J1CLE7 40S ribosomal protein S25

9.2e-48

98.15

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNN+VLFDQGTYDKLLSEAPK+KLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

SwissProt top hits

e value

%identity

Alignment

P46301 40S ribosomal protein S25

4.9e-46

88.89

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKK +APPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFD+ TYDKLLSEAPK+KLITPS+LSDRLRI+GSLAR+AI+DLMARGSIR++SAH+SQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

Q8GYL5 40S ribosomal protein S25-3

7.5e-47

91.59

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLLSEAPKFKLITPSILSDRLRINGSLARRAI++LMA+G+IR++SAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATN
        IYTRAT+
Subjt:  IYTRATN

Q9SIK2 40S ribosomal protein S25-2

8.9e-48

91.67

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL+EAPKFKLITPSILSDR+RINGSLARRAI++LMA+G IR++SAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

Q9SIW5 40S ribosomal protein S25-1

1.2e-44

88.68

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKL+SEAPKFKLITPSILSDRLRINGSLAR+AI+DLM +G+IR++S HSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRAT
        I TRAT
Subjt:  IYTRAT

Q9T029 40S ribosomal protein S25-4

9.8e-47

89.81

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL+EAPKFKLITPSILSDR+RINGSLARRAI++LMA+G IR+++AHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

Arabidopsis top hits

e value

%identity

Alignment

AT2G21580.1 Ribosomal protein S25 family protein

6.3e-49

91.67

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL+EAPKFKLITPSILSDR+RINGSLARRAI++LMA+G IR++SAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

AT2G21580.2 Ribosomal protein S25 family protein

4.5e-47

90.74

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQGTYDKLL+EAPKFKLITPSILSDR+RINGSLARRAI++LMA+G IR++SAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

AT4G34555.1 Ribosomal protein S25 family protein

5.3e-48

91.59

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLLSEAPKFKLITPSILSDRLRINGSLARRAI++LMA+G+IR++SAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATN
        IYTRAT+
Subjt:  IYTRATN

AT4G39200.1 Ribosomal protein S25 family protein

7.0e-48

89.81

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL+EAPKFKLITPSILSDR+RINGSLARRAI++LMA+G IR+++AHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

AT4G39200.2 Ribosomal protein S25 family protein

5.0e-46

88.89

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQ TYDKLL+EAPKFKLITPSILSDR+RINGSLARRAI++LMA+G IR+++AHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCACCTAAGAAGGACAAGGCTCCTCCTCCATCCTCCAAGCCCGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAGGGAAAGCAGAAGGAGAAGGT
GAACAACATGGTATTGTTTGATCAGGGAACCTATGACAAGCTTCTTTCAGAAGCTCCAAAGTTCAAGCTTATTACTCCTTCCATCCTTTCTGACAGATTAAGGATCAATG
GATCATTGGCACGTCGGGCGATCAAGGATTTAATGGCGAGAGGTTCTATCCGGCTCATATCTGCTCATTCTAGCCAGCAAATATACACTAGAGCCACAAATACATGA

mRNA sequence

Show/hide mRNA sequence

ATTAATTTTCCTCCGCATTCTCTCGGAGCTCCAGCCGGCAGCCACACCAACCTTCTGCCTTCGTCTTCCATCCAAATTCTCAGCTCTAAACCTACTCGACATGGCACCTA
AGAAGGACAAGGCTCCTCCTCCATCCTCCAAGCCCGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAGGGAAAGCAGAAGGAGAAGGTGAACAACATG
GTATTGTTTGATCAGGGAACCTATGACAAGCTTCTTTCAGAAGCTCCAAAGTTCAAGCTTATTACTCCTTCCATCCTTTCTGACAGATTAAGGATCAATGGATCATTGGC
ACGTCGGGCGATCAAGGATTTAATGGCGAGAGGTTCTATCCGGCTCATATCTGCTCATTCTAGCCAGCAAATATACACTAGAGCCACAAATACATGATCAAAGAATTGCC
ATTTAAAGGAGGAACATCTTGGTTTTCTTGCATCTCGTCAGAAACTATCTATGATTTTGAATATCGGCATGTTTGCATTTAGAACTGGATGAATTATTTGCACTGCTTGA
TCGGATATATTTTATATAATTTGCATTTTTGCTTTCATTTCTTTGAGTTCCTCTAGCAAATGAGCAAGCATGTACTATTGATTTTGGATTAGAGATTCGTGGTCTCTACT
TTGTCGATGGAAGAAAAAATACTGAAACATCTTATGTAAAGGGTCGTAAGGCACTATTTTAATGGCTCAATGAATTCACTTTGACTTTTCATT

Protein sequence

Show/hide protein sequence

MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQIYTRATNT

IVF0013407 (gene) of Melon (IVF77) v1 genome