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IVF0013442 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013442
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionglycine-rich cell wall structural protein 1.0-like
Genome locationchr08:29227134..29227556
RNA-Seq ExpressionIVF0013442
SyntenyIVF0013442
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649549.1 hypothetical protein Csa_018168, partial [Cucumis sativus]5.36e-4581.63Show/hide
Query:  MSKRKDKIGIYLEGGNTSTTDSNMFTGTSYGGWGWDWTFSTVGDTVNGEGGENSLEVGDGNGGITGGNGGGGSGVSIHETGCGGGDSGGRGVSEHGVG
        MS  KDK GIY+EGGNTSTTDSNMF+G+SYGGWGWDWTFSTVGDTVNG  G NSLEVGDGNGG+TGG GGGGS  SIHET CG GD GG GVS+HGVG
Subjt:  MSKRKDKIGIYLEGGNTSTTDSNMFTGTSYGGWGWDWTFSTVGDTVNGEGGENSLEVGDGNGGITGGNGGGGSGVSIHETGCGGGDSGGRGVSEHGVG

KAG6595345.1 hypothetical protein SDJN03_11898, partial [Cucurbita argyrosperma subsp. sororia]1.03e-1645.45Show/hide
Query:  SKRKDKIGIYLEGGNTS--TTDSNMFTGTS------YGGWGWDWTFSTVGDTVNGEG-GENSLEVGDGNG---------------GITGGNGGGGSGVSI
        + R  K G Y+EGGN      D   + GT+      YGGWGWDWTFS+VGDT NG G G    +VG G G               G+  GNG G +G S 
Subjt:  SKRKDKIGIYLEGGNTS--TTDSNMFTGTS------YGGWGWDWTFSTVGDTVNGEG-GENSLEVGDGNG---------------GITGGNGGGGSGVSI

Query:  HETGCGGGD---------SGGRGVSEHGVGVSSHVDGGHSYGGGGTSSNDHGGGGS-----GGGGFSDFGGGGSSI
        HE G GGG           GG  VS+HG G S H+DGGHS  GGG SS+  GGGG+     GGGG SD+GGGG   
Subjt:  HETGCGGGD---------SGGRGVSEHGVGVSSHVDGGHSYGGGGTSSNDHGGGGS-----GGGGFSDFGGGGSSI

XP_008450026.1 PREDICTED: glycine-rich cell wall structural protein 1.0-like [Cucumis melo]3.64e-86100Show/hide
Query:  MSKRKDKIGIYLEGGNTSTTDSNMFTGTSYGGWGWDWTFSTVGDTVNGEGGENSLEVGDGNGGITGGNGGGGSGVSIHETGCGGGDSGGRGVSEHGVGVS
        MSKRKDKIGIYLEGGNTSTTDSNMFTGTSYGGWGWDWTFSTVGDTVNGEGGENSLEVGDGNGGITGGNGGGGSGVSIHETGCGGGDSGGRGVSEHGVGVS
Subjt:  MSKRKDKIGIYLEGGNTSTTDSNMFTGTSYGGWGWDWTFSTVGDTVNGEGGENSLEVGDGNGGITGGNGGGGSGVSIHETGCGGGDSGGRGVSEHGVGVS

Query:  SHVDGGHSYGGGGTSSNDHGGGGSGGGGFSDFGGGGSSIW
        SHVDGGHSYGGGGTSSNDHGGGGSGGGGFSDFGGGGSSIW
Subjt:  SHVDGGHSYGGGGTSSNDHGGGGSGGGGFSDFGGGGSSIW

XP_022931867.1 glycine-rich protein 23-like [Cucurbita moschata]1.17e-1443.16Show/hide
Query:  SKRKDKIGIYLEGGNTS--TTDSNMFTGTS------YGGWGWDWTFSTVGDTVNGEG-GENSLEVGDGNG---------------GITGGNGGGGSGVSI
        + R  K G Y+EGGN      D   + GT+      YGGWGWDWTFS+VGDT NG G G    +VG G G               G+  GNG G +G S 
Subjt:  SKRKDKIGIYLEGGNTS--TTDSNMFTGTS------YGGWGWDWTFSTVGDTVNGEG-GENSLEVGDGNG---------------GITGGNGGGGSGVSI

Query:  HETG------------CGGGDSGGRGVSEHGVGVSSHVDGGHSY---------GGGGTSSNDHGGGGS------GGGGFSDFGGGGSSIW
        HE G            CGGG   G  VS+ G G S H+DGGHS          GGGG +S DHGGGG       GGGG+   GGGGSS W
Subjt:  HETG------------CGGGDSGGRGVSEHGVGVSSHVDGGHSY---------GGGGTSSNDHGGGGS------GGGGFSDFGGGGSSIW

XP_022966633.1 loricrin-like [Cucurbita maxima]1.89e-1443.32Show/hide
Query:  SKRKDKIGIYLEGGNTS--TTDSNMFTGTS------YGGWGWDWTFSTVGDTVNGE--------GGENSLEVGD-----GNGGITGGNGGGGSGVSIHET
        + R  K G Y+EGGN      D   + GT+      YGGWGWDWTFS+VGDT NG         GG    EVG      G G   G   G G+G S HE 
Subjt:  SKRKDKIGIYLEGGNTS--TTDSNMFTGTS------YGGWGWDWTFSTVGDTVNGE--------GGENSLEVGD-----GNGGITGGNGGGGSGVSIHET

Query:  G------------CGGGDSGGRGVSEHGVGVSSHVDGGHSYGGGGTSSN---------DHGGGGSG-------GGGFSDFGGGGSSI
        G            CGGG   G  VS+HG G S H+DGGHS  GGG SS+         DHGGGG G       GGG SD+GGGG   
Subjt:  G------------CGGGDSGGRGVSEHGVGVSSHVDGGHSYGGGGTSSN---------DHGGGGSG-------GGGFSDFGGGGSSI

TrEMBL top hitse value%identityAlignment
A0A0A0KXB6 Uncharacterized protein5.6e-4569.59Show/hide
Query:  MSKRKDKIGIYLEGGNTSTTDSNMFTGTSYGGWGWDWTFSTVGDTVNGEGGENSLEVGDGNGGITGGNGGGGSGVSIHETGCGGGDSGGRGVSEHGVGVS
        MS  KDK GIY+EGGNTSTTDSNMF+G+SYGGWGWDWTFSTVGDTVNG  G NSLEVGDGNGG+TGG GGGGS  SIHET CG GD GG GVS+HGVGVS
Subjt:  MSKRKDKIGIYLEGGNTSTTDSNMFTGTSYGGWGWDWTFSTVGDTVNGEGGENSLEVGDGNGGITGGNGGGGSGVSIHETGCGGGDSGGRGVSEHGVGVS

Query:  SHVD-GGHSYGGGGTSSNDH------------------------------GGGGSGGGGFSDFGGGGSSIW
        SHVD GG SYGGGGTSSND                               GGGG GGGGFSDFGGGGSSIW
Subjt:  SHVD-GGHSYGGGGTSSNDH------------------------------GGGGSGGGGFSDFGGGGSSIW

A0A1S3BNC1 glycine-rich cell wall structural protein 1.0-like6.3e-65100Show/hide
Query:  MSKRKDKIGIYLEGGNTSTTDSNMFTGTSYGGWGWDWTFSTVGDTVNGEGGENSLEVGDGNGGITGGNGGGGSGVSIHETGCGGGDSGGRGVSEHGVGVS
        MSKRKDKIGIYLEGGNTSTTDSNMFTGTSYGGWGWDWTFSTVGDTVNGEGGENSLEVGDGNGGITGGNGGGGSGVSIHETGCGGGDSGGRGVSEHGVGVS
Subjt:  MSKRKDKIGIYLEGGNTSTTDSNMFTGTSYGGWGWDWTFSTVGDTVNGEGGENSLEVGDGNGGITGGNGGGGSGVSIHETGCGGGDSGGRGVSEHGVGVS

Query:  SHVDGGHSYGGGGTSSNDHGGGGSGGGGFSDFGGGGSSIW
        SHVDGGHSYGGGGTSSNDHGGGGSGGGGFSDFGGGGSSIW
Subjt:  SHVDGGHSYGGGGTSSNDHGGGGSGGGGFSDFGGGGSSIW

A0A5A7TNP5 Glycine-rich cell wall structural protein 1.0-like6.3e-65100Show/hide
Query:  MSKRKDKIGIYLEGGNTSTTDSNMFTGTSYGGWGWDWTFSTVGDTVNGEGGENSLEVGDGNGGITGGNGGGGSGVSIHETGCGGGDSGGRGVSEHGVGVS
        MSKRKDKIGIYLEGGNTSTTDSNMFTGTSYGGWGWDWTFSTVGDTVNGEGGENSLEVGDGNGGITGGNGGGGSGVSIHETGCGGGDSGGRGVSEHGVGVS
Subjt:  MSKRKDKIGIYLEGGNTSTTDSNMFTGTSYGGWGWDWTFSTVGDTVNGEGGENSLEVGDGNGGITGGNGGGGSGVSIHETGCGGGDSGGRGVSEHGVGVS

Query:  SHVDGGHSYGGGGTSSNDHGGGGSGGGGFSDFGGGGSSIW
        SHVDGGHSYGGGGTSSNDHGGGGSGGGGFSDFGGGGSSIW
Subjt:  SHVDGGHSYGGGGTSSNDHGGGGSGGGGFSDFGGGGSSIW

A0A6J1EUX9 glycine-rich protein 23-like1.5e-1045.35Show/hide
Query:  SKRKDKIGIYLEGGNT--STTDSNMFTGTS------YGGWGWDWTFSTVGDTVNGEG-GENSLEVGDGNG-GITGGNG-------------GGGSGVSIH
        + R  K G Y+EGGN      D   + GT+      YGGWGWDWTFS+VGDT NG G G    +VG G G    GG G             G G+G S H
Subjt:  SKRKDKIGIYLEGGNT--STTDSNMFTGTS------YGGWGWDWTFSTVGDTVNGEG-GENSLEVGDGNG-GITGGNG-------------GGGSGVSIH

Query:  ETGCGGG---------DSGGRGVSEHGVGVSSHVDGGHSYGGGGTSSNDHGGGGS-----GGGGFSDFGGGG
        E G G G           GG  VS+ G G S H+DGGHS  GGG SS+  GGGG+     GGGG SD+GGGG
Subjt:  ETGCGGG---------DSGGRGVSEHGVGVSSHVDGGHSYGGGGTSSNDHGGGGS-----GGGGFSDFGGGG

A0A6J1HSN5 loricrin-like1.5e-1044.2Show/hide
Query:  SKRKDKIGIYLEGGNT--STTDSNMFTGTS------YGGWGWDWTFSTVGDTVNGE--------GGENSLEVGD-----GNGGITGGNGGGGSGVSIHET
        + R  K G Y+EGGN      D   + GT+      YGGWGWDWTFS+VGDT NG         GG    EVG      G G   G   G G+G S HE 
Subjt:  SKRKDKIGIYLEGGNT--STTDSNMFTGTS------YGGWGWDWTFSTVGDTVNGE--------GGENSLEVGD-----GNGGITGGNGGGGSGVSIHET

Query:  GCGGG---------DSGGRGVSEHGVGVSSHVDGGHSYGGGGTS---------SNDHGGGG-------SGGGGFSDFGGGG
        G G G           GG  VS+HG G S H+DGGHS  GGG S         S+DHGGGG        GGGG SD+GGGG
Subjt:  GCGGG---------DSGGRGVSEHGVGVSSHVDGGHSYGGGGTS---------SNDHGGGG-------SGGGGFSDFGGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAAGAGAAAAGATAAAATTGGAATATATCTCGAAGGTGGAAATACAAGTACAACAGACAGCAATATGTTTACTGGCACTAGTTATGGAGGTTGGGGTTGGGATTG
GACTTTCAGCACTGTCGGAGATACAGTCAACGGTGAAGGTGGCGAGAATAGTCTTGAGGTTGGAGATGGAAATGGTGGCATTACTGGAGGCAACGGCGGAGGTGGCAGTG
GAGTAAGTATTCATGAGACAGGTTGTGGTGGTGGTGATAGCGGAGGTAGAGGGGTTTCTGAACATGGAGTTGGTGTGAGTTCTCATGTGGATGGAGGTCATAGTTATGGA
GGCGGAGGAACAAGTTCTAATGATCACGGCGGAGGTGGAAGTGGAGGTGGAGGGTTTTCTGATTTTGGAGGGGGAGGATCATCTATTTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTAAGAGAAAAGATAAAATTGGAATATATCTCGAAGGTGGAAATACAAGTACAACAGACAGCAATATGTTTACTGGCACTAGTTATGGAGGTTGGGGTTGGGATTG
GACTTTCAGCACTGTCGGAGATACAGTCAACGGTGAAGGTGGCGAGAATAGTCTTGAGGTTGGAGATGGAAATGGTGGCATTACTGGAGGCAACGGCGGAGGTGGCAGTG
GAGTAAGTATTCATGAGACAGGTTGTGGTGGTGGTGATAGCGGAGGTAGAGGGGTTTCTGAACATGGAGTTGGTGTGAGTTCTCATGTGGATGGAGGTCATAGTTATGGA
GGCGGAGGAACAAGTTCTAATGATCACGGCGGAGGTGGAAGTGGAGGTGGAGGGTTTTCTGATTTTGGAGGGGGAGGATCATCTATTTGGTGA
Protein sequenceShow/hide protein sequence
MSKRKDKIGIYLEGGNTSTTDSNMFTGTSYGGWGWDWTFSTVGDTVNGEGGENSLEVGDGNGGITGGNGGGGSGVSIHETGCGGGDSGGRGVSEHGVGVSSHVDGGHSYG
GGGTSSNDHGGGGSGGGGFSDFGGGGSSIW