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IVF0013487 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013487
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionComplex 1 LYR protein
Genome locationchr03:22650126..22650602
RNA-Seq ExpressionIVF0013487
SyntenyIVF0013487
Gene Ontology termsGO:0032981 - mitochondrial respiratory chain complex I assembly (biological process)
GO:0005759 - mitochondrial matrix (cellular component)
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016900070.1 PREDICTED: uncharacterized protein LOC103488569 [Cucumis melo]1.04e-105100Show/hide
Query:  MTMRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLITQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRD
        MTMRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLITQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRD
Subjt:  MTMRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLITQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRD

Query:  VLRQNARKEFEDARFESDPEIVTRLLIGGRDAVQSALDKLAEKQRKEIDKKQSGRDQL
        VLRQNARKEFEDARFESDPEIVTRLLIGGRDAVQSALDKLAEKQRKEIDKKQSGRDQL
Subjt:  VLRQNARKEFEDARFESDPEIVTRLLIGGRDAVQSALDKLAEKQRKEIDKKQSGRDQL

XP_022961619.1 uncharacterized protein LOC111462339 [Cucurbita moschata]8.45e-8986.54Show/hide
Query:  MTMRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLITQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRD
        M+MRLV K + LS+  KNFL C+K+GFHPR+LHNGPDT++ELLDRHVVKKEKS DDD ++LITQRRLTSTRREALSLYRDILRATRFFMWPDS+GVLWRD
Subjt:  MTMRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLITQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRD

Query:  VLRQNARKEFEDARFESDPEIVTRLLIGGRDAVQSALDKLAEKQRKEIDKKQSGRD
        VLRQNARKEFEDARFE+DPEIVTRLLIGGRDAVQSALDKLAEKQR+EIDKKQSGRD
Subjt:  VLRQNARKEFEDARFESDPEIVTRLLIGGRDAVQSALDKLAEKQRKEIDKKQSGRD

XP_023545212.1 uncharacterized protein LOC111804691 [Cucurbita pepo subsp. pepo]4.01e-8785.9Show/hide
Query:  MTMRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLITQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRD
        M+MRLV K + LS+  KNFL C+KIG+ PR LHNGPDT++ELLDRHVVKKEKS DDD ++LITQRRLTSTRREALSLYRDILRATRFFMWPDS+GVLWRD
Subjt:  MTMRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLITQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRD

Query:  VLRQNARKEFEDARFESDPEIVTRLLIGGRDAVQSALDKLAEKQRKEIDKKQSGRD
        VLRQNARKEFEDARFE+DPEIVTRLLIGGRDAVQSALDKLAEKQR+EIDKKQSGRD
Subjt:  VLRQNARKEFEDARFESDPEIVTRLLIGGRDAVQSALDKLAEKQRKEIDKKQSGRD

XP_031736624.1 uncharacterized protein LOC101214249 [Cucumis sativus]1.03e-9691.77Show/hide
Query:  MTMRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLITQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRD
        MTMRLVGKYLNLSSI KNFL CSKIGFHPRVLHNGPDTVEELLDRHVVKKEK  DD+ DKLITQRRLT+TRREALSLYRDILRATRFFMWPDS+GVLWRD
Subjt:  MTMRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLITQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRD

Query:  VLRQNARKEFEDARFESDPEIVTRLLIGGRDAVQSALDKLAEKQRKEIDKKQSGRDQL
        VLR+NARKEFEDAR ESDPE+VTRLLIGGRDAVQSALDKLAEKQR+EIDKKQ GRDQL
Subjt:  VLRQNARKEFEDARFESDPEIVTRLLIGGRDAVQSALDKLAEKQRKEIDKKQSGRDQL

XP_038884246.1 uncharacterized protein LOC120075144 [Benincasa hispida]4.08e-9189.74Show/hide
Query:  MRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLITQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRDVL
        MRLVGK LNLS I KNFL C+KIGFHPRVLHNGPDTV ELLDRHVVKKEKS DD+ D+LITQRRLT+TRREALSLYRDILRATRFFMWPDS+GVLWRDVL
Subjt:  MRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLITQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRDVL

Query:  RQNARKEFEDARFESDPEIVTRLLIGGRDAVQSALDKLAEKQRKEIDKKQSGRDQL
        RQNARKEFEDAR+ESDPEIVTRLLIGGRDAVQSALDKLAEKQ +EIDKKQ+GRDQL
Subjt:  RQNARKEFEDARFESDPEIVTRLLIGGRDAVQSALDKLAEKQRKEIDKKQSGRDQL

TrEMBL top hitse value%identityAlignment
A0A0A0LMK5 Uncharacterized protein9.9e-7591.77Show/hide
Query:  MTMRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLITQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRD
        MTMRLVGKYLNLSSI KNFL CSKIGFHPRVLHNGPDTVEELLDRHVVKKEK  DD+ DKLITQRRLT+TRREALSLYRDILRATRFFMWPDS+GVLWRD
Subjt:  MTMRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLITQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRD

Query:  VLRQNARKEFEDARFESDPEIVTRLLIGGRDAVQSALDKLAEKQRKEIDKKQSGRDQL
        VLR+NARKEFEDAR ESDPE+VTRLLIGGRDAVQSALDKLAEKQR+EIDKKQ GRDQL
Subjt:  VLRQNARKEFEDARFESDPEIVTRLLIGGRDAVQSALDKLAEKQRKEIDKKQSGRDQL

A0A1S4DWJ1 uncharacterized protein LOC1034885691.4e-81100Show/hide
Query:  MTMRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLITQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRD
        MTMRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLITQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRD
Subjt:  MTMRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLITQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRD

Query:  VLRQNARKEFEDARFESDPEIVTRLLIGGRDAVQSALDKLAEKQRKEIDKKQSGRDQL
        VLRQNARKEFEDARFESDPEIVTRLLIGGRDAVQSALDKLAEKQRKEIDKKQSGRDQL
Subjt:  VLRQNARKEFEDARFESDPEIVTRLLIGGRDAVQSALDKLAEKQRKEIDKKQSGRDQL

A0A5A7VCD6 Complex 1 LYR protein1.4e-81100Show/hide
Query:  MTMRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLITQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRD
        MTMRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLITQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRD
Subjt:  MTMRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLITQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRD

Query:  VLRQNARKEFEDARFESDPEIVTRLLIGGRDAVQSALDKLAEKQRKEIDKKQSGRDQL
        VLRQNARKEFEDARFESDPEIVTRLLIGGRDAVQSALDKLAEKQRKEIDKKQSGRDQL
Subjt:  VLRQNARKEFEDARFESDPEIVTRLLIGGRDAVQSALDKLAEKQRKEIDKKQSGRDQL

A0A6J1CRY1 uncharacterized protein LOC1110140197.6e-6784.08Show/hide
Query:  MTMRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLITQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRD
        MT+RLVGK LNL SI K+FL C+KIGFHPRVLHNGPDT++ELLDRHVVKKEKS +D+ D+LITQR LTSTRREALSLYRDI+RATRFFMWPDS+GVLWRD
Subjt:  MTMRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLITQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRD

Query:  VLRQNARKEFEDARFESDPEIVTRLLIGGRDAVQSALDKLAEKQRKEIDKKQSGRDQ
        VLR+NARKEFE+AR+ESDPE+VTRLLIGGRDAVQSALDKLAEKQ +EIDKKQ G DQ
Subjt:  VLRQNARKEFEDARFESDPEIVTRLLIGGRDAVQSALDKLAEKQRKEIDKKQSGRDQ

A0A6J1HEL0 uncharacterized protein LOC1114623398.1e-6985.99Show/hide
Query:  MTMRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLITQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRD
        M+MRLV K + LS+  KNFL C+K+GFHPR+LHNGPDT++ELLDRHVVKKEKS DDD ++LITQRRLTSTRREALSLYRDILRATRFFMWPDS+GVLWRD
Subjt:  MTMRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLITQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRD

Query:  VLRQNARKEFEDARFESDPEIVTRLLIGGRDAVQSALDKLAEKQRKEIDKKQSGRDQ
        VLRQNARKEFEDARFE+DPEIVTRLLIGGRDAVQSALDKLAEKQR+EIDKKQSGRD+
Subjt:  VLRQNARKEFEDARFESDPEIVTRLLIGGRDAVQSALDKLAEKQRKEIDKKQSGRDQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76060.1 LYR family of Fe/S cluster biogenesis protein1.5e-4673.81Show/hide
Query:  RVLHNGPDTVEELLDRHVVKKEKS-LDDDADKLITQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRDVLRQNARKEFEDARFESDPEIVTRLLIG
        R LH GPDTVEELL+RH+ KKEK  +D D  + + +RRLTSTRREALSLYRDILRATRFF W DS+G LWRDVLR+NARKEFE ARFE+DPE++TRLLIG
Subjt:  RVLHNGPDTVEELLDRHVVKKEKS-LDDDADKLITQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRDVLRQNARKEFEDARFESDPEIVTRLLIG

Query:  GRDAVQSALDKLAEKQRKEIDKKQSG
        G DAV SALDKLAEKQR+ I+K++ G
Subjt:  GRDAVQSALDKLAEKQRKEIDKKQSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCATGAGGTTGGTAGGAAAATATCTTAATCTGTCGTCAATTGATAAGAATTTTCTGAACTGCAGTAAAATTGGTTTCCATCCTCGAGTTTTGCATAATGGTCCTGA
CACTGTAGAAGAACTCTTAGACAGACATGTGGTTAAGAAAGAAAAGTCCTTGGATGATGATGCTGATAAATTGATAACACAGCGACGTCTCACCAGCACTCGACGTGAGG
CTCTAAGCCTCTATAGAGACATTCTACGGGCAACTCGATTCTTTATGTGGCCAGATTCTAAAGGTGTCTTGTGGCGAGATGTCCTCAGGCAGAATGCACGGAAGGAGTTT
GAGGATGCACGCTTTGAGTCTGATCCAGAAATAGTGACCCGACTTCTGATTGGTGGGCGTGATGCAGTGCAGTCGGCACTTGACAAGCTTGCCGAGAAACAGAGGAAGGA
GATTGATAAGAAACAAAGTGGTCGAGATCAACTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCATGAGGTTGGTAGGAAAATATCTTAATCTGTCGTCAATTGATAAGAATTTTCTGAACTGCAGTAAAATTGGTTTCCATCCTCGAGTTTTGCATAATGGTCCTGA
CACTGTAGAAGAACTCTTAGACAGACATGTGGTTAAGAAAGAAAAGTCCTTGGATGATGATGCTGATAAATTGATAACACAGCGACGTCTCACCAGCACTCGACGTGAGG
CTCTAAGCCTCTATAGAGACATTCTACGGGCAACTCGATTCTTTATGTGGCCAGATTCTAAAGGTGTCTTGTGGCGAGATGTCCTCAGGCAGAATGCACGGAAGGAGTTT
GAGGATGCACGCTTTGAGTCTGATCCAGAAATAGTGACCCGACTTCTGATTGGTGGGCGTGATGCAGTGCAGTCGGCACTTGACAAGCTTGCCGAGAAACAGAGGAAGGA
GATTGATAAGAAACAAAGTGGTCGAGATCAACTCTGA
Protein sequenceShow/hide protein sequence
MTMRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADKLITQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRDVLRQNARKEF
EDARFESDPEIVTRLLIGGRDAVQSALDKLAEKQRKEIDKKQSGRDQL