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IVF0013488 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013488
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNBS-LRR type resistance protein
Genome locationchr12:10411899..10412081
RNA-Seq ExpressionIVF0013488
SyntenyIVF0013488
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035524.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]5.36e-1468.52Show/hide
Query:  LQQTKWAELEDFRCSSKENAIENGLDSVFSSWGKKRSPDGFFHLLRIGYKSFDL
        LQ+ K AELEDF   S+EN  EN L+ VFSSWGKK SP+GFF L RIG+KSFDL
Subjt:  LQQTKWAELEDFRCSSKENAIENGLDSVFSSWGKKRSPDGFFHLLRIGYKSFDL

KAA0040927.1 hypothetical protein E6C27_scaffold125G00720 [Cucumis melo var. makuwa]1.85e-1678Show/hide
Query:  LQQTKWAELEDFRCSSKENAIENGLDSVFSSWGKKRSPDGFFHLLRIGYK
        LQQ K AELEDF+CSS ENA EN  DSV+SSWGKKRSP+GFF LLRIG+K
Subjt:  LQQTKWAELEDFRCSSKENAIENGLDSVFSSWGKKRSPDGFFHLLRIGYK

KAA0057641.1 hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa]2.15e-1774.07Show/hide
Query:  LQQTKWAELEDFRCSSKENAIENGLDSVFSSWGKKRSPDGFFHLLRIGYKSFDL
        LQ+ K  EL+DF CSS+ENA +N  DS FSSWGKKRSP GFFHLLRIG+KSFDL
Subjt:  LQQTKWAELEDFRCSSKENAIENGLDSVFSSWGKKRSPDGFFHLLRIGYKSFDL

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]2.96e-1772.13Show/hide
Query:  MSETTG--LQQTKWAELEDFRCSSKENAIENGLDSVFSSWGKKRSPDGFFHLLRIGYKSFD
        +SETTG  L   K AEL+DF CSS+ENA EN LDSVFSSWGKK+SPDGFF L RIG+KS D
Subjt:  MSETTG--LQQTKWAELEDFRCSSKENAIENGLDSVFSSWGKKRSPDGFFHLLRIGYKSFD

TYK22521.1 uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]1.39e-1676.47Show/hide
Query:  LQQTKWAELEDFRCSSKENAIENGLDSVFSSWGKKRSPDGFFHLLRIGYKS
        LQ+ K  ELEDFRCSS+EN  EN  DS FSSWGKKRSPDGFF LLRIG+KS
Subjt:  LQQTKWAELEDFRCSSKENAIENGLDSVFSSWGKKRSPDGFFHLLRIGYKS

TrEMBL top hitse value%identityAlignment
A0A5A7UVV0 Uncharacterized protein1.8e-1374.07Show/hide
Query:  LQQTKWAELEDFRCSSKENAIENGLDSVFSSWGKKRSPDGFFHLLRIGYKSFDL
        LQ+ K  EL+DF CSS+ENA +N  DS FSSWGKKRSP GFFHLLRIG+KSFDL
Subjt:  LQQTKWAELEDFRCSSKENAIENGLDSVFSSWGKKRSPDGFFHLLRIGYKSFDL

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein2.4e-1372.13Show/hide
Query:  MSETTG--LQQTKWAELEDFRCSSKENAIENGLDSVFSSWGKKRSPDGFFHLLRIGYKSFD
        +SETTG  L   K AEL+DF CSS+ENA EN LDSVFSSWGKK+SPDGFF L RIG+KS D
Subjt:  MSETTG--LQQTKWAELEDFRCSSKENAIENGLDSVFSSWGKKRSPDGFFHLLRIGYKSFD

A0A5D3CGX3 Uncharacterized protein2.0e-1278Show/hide
Query:  LQQTKWAELEDFRCSSKENAIENGLDSVFSSWGKKRSPDGFFHLLRIGYK
        LQQ K AELEDF+CSS ENA EN  DSV+SSWGKKRSP+GFF LLRIG+K
Subjt:  LQQTKWAELEDFRCSSKENAIENGLDSVFSSWGKKRSPDGFFHLLRIGYK

A0A5D3DFP2 Uncharacterized protein1.2e-1276.47Show/hide
Query:  LQQTKWAELEDFRCSSKENAIENGLDSVFSSWGKKRSPDGFFHLLRIGYKS
        LQ+ K  ELEDFRCSS+EN  EN  DS FSSWGKKRSPDGFF LLRIG+KS
Subjt:  LQQTKWAELEDFRCSSKENAIENGLDSVFSSWGKKRSPDGFFHLLRIGYKS

A0A5D3E5W4 NBS-LRR type resistance protein1.9e-1068.52Show/hide
Query:  LQQTKWAELEDFRCSSKENAIENGLDSVFSSWGKKRSPDGFFHLLRIGYKSFDL
        LQ+ K AELEDF   S+EN  EN L+ VFSSWGKK SP+GFF L RIG+KSFDL
Subjt:  LQQTKWAELEDFRCSSKENAIENGLDSVFSSWGKKRSPDGFFHLLRIGYKSFDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGAAACCACTGGATTGCAGCAAACAAAATGGGCTGAGCTCGAGGACTTCCGGTGTTCATCCAAAGAGAACGCGATCGAGAACGGCCTGGACTCAGTTTTCTCGTC
TTGGGGTAAAAAGCGGTCCCCCGACGGTTTCTTCCATTTGCTTCGTATTGGTTATAAGTCGTTCGATCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGAAACCACTGGATTGCAGCAAACAAAATGGGCTGAGCTCGAGGACTTCCGGTGTTCATCCAAAGAGAACGCGATCGAGAACGGCCTGGACTCAGTTTTCTCGTC
TTGGGGTAAAAAGCGGTCCCCCGACGGTTTCTTCCATTTGCTTCGTATTGGTTATAAGTCGTTCGATCTTTGA
Protein sequenceShow/hide protein sequence
MSETTGLQQTKWAELEDFRCSSKENAIENGLDSVFSSWGKKRSPDGFFHLLRIGYKSFDL