; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0013491 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013491
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr06:11263768..11263935
RNA-Seq ExpressionIVF0013491
SyntenyIVF0013491
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040595.1 retrotransposon protein [Cucumis melo var. makuwa]5.41e-2274.55Show/hide
Query:  MVNCDDIDELDEGDSTYATTTTTEDIQYIETTIEWSNWCNELAEVMFTEWQLCNA
        MVNC+D+D+L+EG STYATT  TEDIQYIE T EWSNWCNELAE +FT+WQL N 
Subjt:  MVNCDDIDELDEGDSTYATTTTTEDIQYIETTIEWSNWCNELAEVMFTEWQLCNA

KAA0048533.1 retrotransposon protein [Cucumis melo var. makuwa]8.65e-22100Show/hide
Query:  MVNCDDIDELDEGDSTYATTTTTEDIQYIETTIEWSNWCNELAE
        MVNCDDIDELDEGDSTYATTTTTEDIQYIETTIEWSNWCNELAE
Subjt:  MVNCDDIDELDEGDSTYATTTTTEDIQYIETTIEWSNWCNELAE

KAA0049604.1 retrotransposon protein [Cucumis melo var. makuwa]4.47e-2478.18Show/hide
Query:  MVNCDDIDELDEGDSTYATTTTTEDIQYIETTIEWSNWCNELAEVMFTEWQLCNA
        M NCDDIDE+DEGDSTYATTT TEDIQ+I T IEWSNWC++LA+ MF EWQL NA
Subjt:  MVNCDDIDELDEGDSTYATTTTTEDIQYIETTIEWSNWCNELAEVMFTEWQLCNA

KAA0062284.1 retrotransposon protein [Cucumis melo var. makuwa]3.59e-2076.36Show/hide
Query:  MVNCDDIDELDEGDSTYATTTTTEDIQYIETTIEWSNWCNELAEVMFTEWQLCNA
        M  CDDID+ DEGDSTYATTT +EDIQYIETT EWS W ++LAE MFTEWQL NA
Subjt:  MVNCDDIDELDEGDSTYATTTTTEDIQYIETTIEWSNWCNELAEVMFTEWQLCNA

TYJ97711.1 retrotransposon protein [Cucumis melo var. makuwa]1.88e-2278.18Show/hide
Query:  MVNCDDIDELDEGDSTYATTTTTEDIQYIETTIEWSNWCNELAEVMFTEWQLCNA
        M NCDDIDE++E DS YATTT TEDIQYI+TT EWSNW +ELAE MFTEWQL NA
Subjt:  MVNCDDIDELDEGDSTYATTTTTEDIQYIETTIEWSNWCNELAEVMFTEWQLCNA

TrEMBL top hitse value%identityAlignment
A0A5A7TYT9 Retrotransposon protein1.2e-1478.85Show/hide
Query:  MVNCDDIDELDEGDSTYATTTTTEDIQYIETTIEWSNWCNELAEVMFTEWQL
        M NCDDIDE++E DS YATTT TEDIQYI+TT EWSNW +ELAE MFTEWQL
Subjt:  MVNCDDIDELDEGDSTYATTTTTEDIQYIETTIEWSNWCNELAEVMFTEWQL

A0A5A7U2Y8 Retrotransposon protein7.3e-1778.18Show/hide
Query:  MVNCDDIDELDEGDSTYATTTTTEDIQYIETTIEWSNWCNELAEVMFTEWQLCNA
        M NCDDIDE+DEGDSTYATTT TEDIQ+I T IEWSNWC++LA+ MF EWQL NA
Subjt:  MVNCDDIDELDEGDSTYATTTTTEDIQYIETTIEWSNWCNELAEVMFTEWQLCNA

A0A5D3BGE3 Retrotransposon protein1.4e-1578.18Show/hide
Query:  MVNCDDIDELDEGDSTYATTTTTEDIQYIETTIEWSNWCNELAEVMFTEWQLCNA
        M NCDDIDE++E DS YATTT TEDIQYI+TT EWSNW +ELAE MFTEWQL NA
Subjt:  MVNCDDIDELDEGDSTYATTTTTEDIQYIETTIEWSNWCNELAEVMFTEWQLCNA

A0A5D3C1E3 Retrotransposon protein4.0e-1575.93Show/hide
Query:  MVNCDDIDELDEGDSTYATTTTTEDIQYIETTIEWSNWCNELAEVMFTEWQLCN
        MVNC+D+D+L+EG STYATT  TEDIQYIE T EWSNWCNELAE +FT+WQL N
Subjt:  MVNCDDIDELDEGDSTYATTTTTEDIQYIETTIEWSNWCNELAEVMFTEWQLCN

A0A5D3DX58 Retrotransposon protein2.1e-16100Show/hide
Query:  MVNCDDIDELDEGDSTYATTTTTEDIQYIETTIEWSNWCNELAE
        MVNCDDIDELDEGDSTYATTTTTEDIQYIETTIEWSNWCNELAE
Subjt:  MVNCDDIDELDEGDSTYATTTTTEDIQYIETTIEWSNWCNELAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAATTGTGACGACATAGACGAACTCGATGAGGGGGACTCCACATACGCCACCACCACCACTACAGAAGACATTCAGTACATTGAGACAACAATCGAGTGGTCAAA
CTGGTGCAACGAATTAGCTGAGGTAATGTTCACTGAATGGCAGTTGTGTAATGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAATTGTGACGACATAGACGAACTCGATGAGGGGGACTCCACATACGCCACCACCACCACTACAGAAGACATTCAGTACATTGAGACAACAATCGAGTGGTCAAA
CTGGTGCAACGAATTAGCTGAGGTAATGTTCACTGAATGGCAGTTGTGTAATGCTTAA
Protein sequenceShow/hide protein sequence
MVNCDDIDELDEGDSTYATTTTTEDIQYIETTIEWSNWCNELAEVMFTEWQLCNA