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IVF0013516 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013516
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr01:17910128..17910439
RNA-Seq ExpressionIVF0013516
SyntenyIVF0013516
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036513.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.96e-3098.25Show/hide
Query:  MNLVKGDITVEEYEKRFIELAKYASTFVIDEEDKCKQFKDGLQTEIRAWITNNMNWS
        MNLVKGDITVEEYEKRFIELAKYASTFVIDEEDKCKQFKDGLQTEIRAWITNNMNW+
Subjt:  MNLVKGDITVEEYEKRFIELAKYASTFVIDEEDKCKQFKDGLQTEIRAWITNNMNWS

KAA0054200.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]2.18e-2450.5Show/hide
Query:  MNLVKGDITVEEYEKRFIELAKYASTFVIDEEDKCKQFKDGLQTEIRAWITNNMNWSDFSKLVEATMRVKRCMENEKNNKILKKNPYSQGLNDLRGDKRC
        M+LV G + V+EYEK+F ELAKYA  FV+DE DKC QF+DGL  EI A +  + NW DFSKLVEATMR+KRC+                 +   +G++RC
Subjt:  MNLVKGDITVEEYEKRFIELAKYASTFVIDEEDKCKQFKDGLQTEIRAWITNNMNWSDFSKLVEATMRVKRCMENEKNNKILKKNPYSQGLNDLRGDKRC

Query:  G
        G
Subjt:  G

KAA0062038.1 hypothetical protein E6C27_scaffold89G003760 [Cucumis melo var. makuwa]3.37e-3162.11Show/hide
Query:  MNLVKGDITVEEYEKRFIELAKYASTFVIDEEDKCKQFKDGLQTEIRAWITNNMNWSDFSKLVEATMRVKRCMENEKNNKILKKNPYSQGLNDLR
        MNLVKG++TV  YEK+F ELAKYA  FV+DE DKCK+F++GLQTEI A +T +M+   FSKLVEA MRV+RCME +K NKI KK+P  Q    +R
Subjt:  MNLVKGDITVEEYEKRFIELAKYASTFVIDEEDKCKQFKDGLQTEIRAWITNNMNWSDFSKLVEATMRVKRCMENEKNNKILKKNPYSQGLNDLR

KAA0062762.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]6.19e-2859.09Show/hide
Query:  ITVEEYEKRFIELAKYASTFVIDEEDKCKQFKDGLQTEIRAWITNNMNWSDFSKLVEATMRVKRCMENEKNNKILKKNPYSQGLNDLR
        +TV EYEK F ELAKYA  FV++E DKCK+F++GL+TEIRA IT +M+WSDFSKLVE  M V++CM  +K N   KK+P SQ  + +R
Subjt:  ITVEEYEKRFIELAKYASTFVIDEEDKCKQFKDGLQTEIRAWITNNMNWSDFSKLVEATMRVKRCMENEKNNKILKKNPYSQGLNDLR

TYK04983.1 uncharacterized protein E5676_scaffold143G002070 [Cucumis melo var. makuwa]1.53e-3062.11Show/hide
Query:  MNLVKGDITVEEYEKRFIELAKYASTFVIDEEDKCKQFKDGLQTEIRAWITNNMNWSDFSKLVEATMRVKRCMENEKNNKILKKNPYSQGLNDLR
        MNLVKG++TV  YEK+F ELAKYA  FV+DE DKCK+F++GLQTEI A +T +M+   FSKLVEA MRV+RCME +K NKI KK+P  Q    +R
Subjt:  MNLVKGDITVEEYEKRFIELAKYASTFVIDEEDKCKQFKDGLQTEIRAWITNNMNWSDFSKLVEATMRVKRCMENEKNNKILKKNPYSQGLNDLR

TrEMBL top hitse value%identityAlignment
A0A5A7T0V0 DNA/RNA polymerases superfamily protein6.8e-2498.25Show/hide
Query:  MNLVKGDITVEEYEKRFIELAKYASTFVIDEEDKCKQFKDGLQTEIRAWITNNMNWS
        MNLVKGDITVEEYEKRFIELAKYASTFVIDEEDKCKQFKDGLQTEIRAWITNNMNW+
Subjt:  MNLVKGDITVEEYEKRFIELAKYASTFVIDEEDKCKQFKDGLQTEIRAWITNNMNWS

A0A5A7V373 Uncharacterized protein6.8e-2462.11Show/hide
Query:  MNLVKGDITVEEYEKRFIELAKYASTFVIDEEDKCKQFKDGLQTEIRAWITNNMNWSDFSKLVEATMRVKRCMENEKNNKILKKNPYSQGLNDLR
        MNLVKG++TV  YEK+F ELAKYA  FV+DE DKCK+F++GLQTEI A +T +M+   FSKLVEA MRV+RCME +K NKI KK+P  Q    +R
Subjt:  MNLVKGDITVEEYEKRFIELAKYASTFVIDEEDKCKQFKDGLQTEIRAWITNNMNWSDFSKLVEATMRVKRCMENEKNNKILKKNPYSQGLNDLR

A0A5A7V3F2 Zf-CCHC domain-containing protein1.2e-2059.09Show/hide
Query:  ITVEEYEKRFIELAKYASTFVIDEEDKCKQFKDGLQTEIRAWITNNMNWSDFSKLVEATMRVKRCMENEKNNKILKKNPYSQGLNDLR
        +TV EYEK F ELAKYA  FV++E DKCK+F++GL+TEIRA IT +M+WSDFSKLVE  M V++CM  +K N   KK+P SQ  + +R
Subjt:  ITVEEYEKRFIELAKYASTFVIDEEDKCKQFKDGLQTEIRAWITNNMNWSDFSKLVEATMRVKRCMENEKNNKILKKNPYSQGLNDLR

A0A5D3BZ05 Retrotrans_gag domain-containing protein6.8e-2462.11Show/hide
Query:  MNLVKGDITVEEYEKRFIELAKYASTFVIDEEDKCKQFKDGLQTEIRAWITNNMNWSDFSKLVEATMRVKRCMENEKNNKILKKNPYSQGLNDLR
        MNLVKG++TV  YEK+F ELAKYA  FV+DE DKCK+F++GLQTEI A +T +M+   FSKLVEA MRV+RCME +K NKI KK+P  Q    +R
Subjt:  MNLVKGDITVEEYEKRFIELAKYASTFVIDEEDKCKQFKDGLQTEIRAWITNNMNWSDFSKLVEATMRVKRCMENEKNNKILKKNPYSQGLNDLR

A0A5D3D2P1 Putative Retrotransposon protein5.0e-1959.26Show/hide
Query:  VKGDITVEEYEKRFIELAKYASTFVIDEEDKCKQFKDGLQTEIRAWITNNMNWSDFSKLVEATMRVKRCMENEKNNKILKK
        V+GD+ + EYEKRFIELAKYA  FV DE DKCK+F++G++TEIRA +T NM+WS+ SK+V+  MRV++ M ++K NK+L K
Subjt:  VKGDITVEEYEKRFIELAKYASTFVIDEEDKCKQFKDGLQTEIRAWITNNMNWSDFSKLVEATMRVKRCMENEKNNKILKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTAGTTAAAGGTGACATTACTGTCGAAGAATATGAAAAACGATTTATTGAGTTGGCTAAGTATGCCTCAACTTTTGTAATTGATGAGGAGGATAAGTGCAAACA
ATTTAAGGATGGGTTACAGACTGAAATTAGAGCATGGATCACGAACAATATGAATTGGTCAGACTTTTCAAAGCTGGTTGAAGCTACCATGAGGGTTAAAAGATGCATGG
AAAATGAAAAGAATAATAAAATTTTGAAGAAGAACCCCTACAGTCAAGGTCTTAACGACTTGCGAGGTGACAAACGATGCGGCGAGACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTTAGTTAAAGGTGACATTACTGTCGAAGAATATGAAAAACGATTTATTGAGTTGGCTAAGTATGCCTCAACTTTTGTAATTGATGAGGAGGATAAGTGCAAACA
ATTTAAGGATGGGTTACAGACTGAAATTAGAGCATGGATCACGAACAATATGAATTGGTCAGACTTTTCAAAGCTGGTTGAAGCTACCATGAGGGTTAAAAGATGCATGG
AAAATGAAAAGAATAATAAAATTTTGAAGAAGAACCCCTACAGTCAAGGTCTTAACGACTTGCGAGGTGACAAACGATGCGGCGAGACCTGA
Protein sequenceShow/hide protein sequence
MNLVKGDITVEEYEKRFIELAKYASTFVIDEEDKCKQFKDGLQTEIRAWITNNMNWSDFSKLVEATMRVKRCMENEKNNKILKKNPYSQGLNDLRGDKRCGET