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IVF0013527 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013527
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr08:11730583..11730807
RNA-Seq ExpressionIVF0013527
SyntenyIVF0013527
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006413 - translational initiation (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041960.1 reverse transcriptase [Cucumis melo var. makuwa]1.48e-3690.54Show/hide
Query:  MAIPLNSSQNSRETDPKEIMRVLEKYRDVMLDSLPKSLPPQRMIDHEIELVPGAKPPAKNAYRMAPPELAELQK
        MAIPLNSS+NS ET PKEIMRVLEKY DVM DSLPKSLPP+RMIDHEIELVPGAKPPAKNAYRMAPPELAEL+K
Subjt:  MAIPLNSSQNSRETDPKEIMRVLEKYRDVMLDSLPKSLPPQRMIDHEIELVPGAKPPAKNAYRMAPPELAELQK

KAA0050675.1 uncharacterized protein E6C27_scaffold673G001580 [Cucumis melo var. makuwa]1.31e-3589.19Show/hide
Query:  MAIPLNSSQNSRETDPKEIMRVLEKYRDVMLDSLPKSLPPQRMIDHEIELVPGAKPPAKNAYRMAPPELAELQK
        MAIPL SS+NS ET PKEIMRVLEKYRDVM DSLPKSLPP+RMIDHEIELVPGAKPP KNAYRMAPPELAEL+K
Subjt:  MAIPLNSSQNSRETDPKEIMRVLEKYRDVMLDSLPKSLPPQRMIDHEIELVPGAKPPAKNAYRMAPPELAELQK

KAA0052270.1 uncharacterized protein E6C27_scaffold207G00960 [Cucumis melo var. makuwa]5.18e-3693.24Show/hide
Query:  MAIPLNSSQNSRETDPKEIMRVLEKYRDVMLDSLPKSLPPQRMIDHEIELVPGAKPPAKNAYRMAPPELAELQK
        MAIPLNSS+NSRET PKEI+RVLEKYRDVM DSLPKSLPPQRMIDHEIELVPGAKPPAKNAYRMAPPELAEL+K
Subjt:  MAIPLNSSQNSRETDPKEIMRVLEKYRDVMLDSLPKSLPPQRMIDHEIELVPGAKPPAKNAYRMAPPELAELQK

TYK01833.1 reverse transcriptase [Cucumis melo var. makuwa]2.85e-3690.54Show/hide
Query:  MAIPLNSSQNSRETDPKEIMRVLEKYRDVMLDSLPKSLPPQRMIDHEIELVPGAKPPAKNAYRMAPPELAELQK
        MAIPLNSS+NSRET PKEI+RVLEKY DVM DSLPKSLPP+RMIDHEIELVPGAKPPAKNAYRMAPPELAEL+K
Subjt:  MAIPLNSSQNSRETDPKEIMRVLEKYRDVMLDSLPKSLPPQRMIDHEIELVPGAKPPAKNAYRMAPPELAELQK

TYK25834.1 uncharacterized protein E5676_scaffold436G00420 [Cucumis melo var. makuwa]8.63e-3691.89Show/hide
Query:  MAIPLNSSQNSRETDPKEIMRVLEKYRDVMLDSLPKSLPPQRMIDHEIELVPGAKPPAKNAYRMAPPELAELQK
        MAIPLNSS+NS ET PKEIMRVLEKYRDVMLDSLPKSLPP+RMIDHEIELVPGAK PAKNAYRMAPPELAEL+K
Subjt:  MAIPLNSSQNSRETDPKEIMRVLEKYRDVMLDSLPKSLPPQRMIDHEIELVPGAKPPAKNAYRMAPPELAELQK

TrEMBL top hitse value%identityAlignment
A0A5A7UAP7 Reverse transcriptase domain-containing protein1.7e-2993.24Show/hide
Query:  MAIPLNSSQNSRETDPKEIMRVLEKYRDVMLDSLPKSLPPQRMIDHEIELVPGAKPPAKNAYRMAPPELAELQK
        MAIPLNSS+NSRET PKEI+RVLEKYRDVM DSLPKSLPPQRMIDHEIELVPGAKPPAKNAYRMAPPELAEL+K
Subjt:  MAIPLNSSQNSRETDPKEIMRVLEKYRDVMLDSLPKSLPPQRMIDHEIELVPGAKPPAKNAYRMAPPELAELQK

A0A5D3B9T5 Reverse transcriptase domain-containing protein3.3e-2890.54Show/hide
Query:  MAIPLNSSQNSRETDPKEIMRVLEKYRDVMLDSLPKSLPPQRMIDHEIELVPGAKPPAKNAYRMAPPELAELQK
        MAIPLNSS+NS ET PKEI+RVLEKYRDVM DSLPKSLPP+RMIDHEIELVPGAKPPAKNAYRMAPPELAEL+K
Subjt:  MAIPLNSSQNSRETDPKEIMRVLEKYRDVMLDSLPKSLPPQRMIDHEIELVPGAKPPAKNAYRMAPPELAELQK

A0A5D3BQ68 Reverse transcriptase1.9e-2890.54Show/hide
Query:  MAIPLNSSQNSRETDPKEIMRVLEKYRDVMLDSLPKSLPPQRMIDHEIELVPGAKPPAKNAYRMAPPELAELQK
        MAIPLNSS+NSRET PKEI+RVLEKY DVM DSLPKSLPP+RMIDHEIELVPGAKPPAKNAYRMAPPELAEL+K
Subjt:  MAIPLNSSQNSRETDPKEIMRVLEKYRDVMLDSLPKSLPPQRMIDHEIELVPGAKPPAKNAYRMAPPELAELQK

A0A5D3C9P8 Reverse transcriptase3.3e-2890.54Show/hide
Query:  MAIPLNSSQNSRETDPKEIMRVLEKYRDVMLDSLPKSLPPQRMIDHEIELVPGAKPPAKNAYRMAPPELAELQK
        MAIPLNSS+NS ET PKEI+RVLEKYRDVM DSLPKSLPP+RMIDHEIELVPGAKPPAKNAYRMAPPELAEL+K
Subjt:  MAIPLNSSQNSRETDPKEIMRVLEKYRDVMLDSLPKSLPPQRMIDHEIELVPGAKPPAKNAYRMAPPELAELQK

A0A5D3DQI8 Uncharacterized protein2.5e-2891.89Show/hide
Query:  MAIPLNSSQNSRETDPKEIMRVLEKYRDVMLDSLPKSLPPQRMIDHEIELVPGAKPPAKNAYRMAPPELAELQK
        MAIPLNSS+NS ET PKEIMRVLEKYRDVMLDSLPKSLPP+RMIDHEIELVPGAK PAKNAYRMAPPELAEL+K
Subjt:  MAIPLNSSQNSRETDPKEIMRVLEKYRDVMLDSLPKSLPPQRMIDHEIELVPGAKPPAKNAYRMAPPELAELQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATCCCACTCAATTCGTCACAGAACTCAAGGGAGACAGACCCTAAGGAGATTATGCGCGTGCTAGAGAAGTACCGTGATGTGATGCTCGATAGTTTGCCCAAGTC
TTTGCCACCTCAGAGAATGATTGATCATGAGATCGAGTTGGTGCCAGGGGCAAAACCGCCTGCGAAGAATGCTTATCGTATGGCGCCTCCGGAGTTAGCTGAACTTCAAA
AATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCATCCCACTCAATTCGTCACAGAACTCAAGGGAGACAGACCCTAAGGAGATTATGCGCGTGCTAGAGAAGTACCGTGATGTGATGCTCGATAGTTTGCCCAAGTC
TTTGCCACCTCAGAGAATGATTGATCATGAGATCGAGTTGGTGCCAGGGGCAAAACCGCCTGCGAAGAATGCTTATCGTATGGCGCCTCCGGAGTTAGCTGAACTTCAAA
AATAG
Protein sequenceShow/hide protein sequence
MAIPLNSSQNSRETDPKEIMRVLEKYRDVMLDSLPKSLPPQRMIDHEIELVPGAKPPAKNAYRMAPPELAELQK