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IVF0013537 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013537
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionras-related protein Rab11C-like
Genome locationchr04:23693303..23695282
RNA-Seq ExpressionIVF0013537
SyntenyIVF0013537
Gene Ontology termsGO:0006468 - protein phosphorylation (biological process)
GO:0006825 - copper ion transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0004672 - protein kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR001806 - Small GTPase
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052805.1 ras-related protein Rab11C-like isoform X2 [Cucumis melo var. makuwa]8.79e-54100Show/hide
Query:  RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG
        RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG
Subjt:  RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG

TYK01106.1 ras-related protein Rab11C-like [Cucumis melo var. makuwa]1.51e-2991.67Show/hide
Query:  GLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG
        GLFKKSR ET MAHKVDHEYDYLFKIV IGDS VGKSNILSRFTRNEF LESKSTIDLLG
Subjt:  GLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG

XP_008448132.1 PREDICTED: ras-related protein Rab11C-like [Cucumis melo]7.92e-5089.66Show/hide
Query:  IGSYRNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG
        I + RNETNFCSYGKVNREVQ+HCPPRGLFKKSR ET MAHKVDHEYDYLFKIV IGDS VGKSNILSRFTRNEF LESKSTIDLLG
Subjt:  IGSYRNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG

XP_008461753.1 PREDICTED: ras-related protein Rab11C-like isoform X1 [Cucumis melo]5.14e-55100Show/hide
Query:  RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG
        RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG
Subjt:  RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG

XP_008461756.1 PREDICTED: ras-related protein Rab11C-like isoform X2 [Cucumis melo]3.77e-59100Show/hide
Query:  MIGSYRNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG
        MIGSYRNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG
Subjt:  MIGSYRNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG

TrEMBL top hitse value%identityAlignment
A0A1S3BJ02 ras-related protein Rab11C-like6.0e-3792.77Show/hide
Query:  RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG
        RNETNFCSYGKVNREVQ+HCPPRGLFKKSR ET MAHKVDHEYDYLFKIV IGDS VGKSNILSRFTRNEF LESKSTIDLLG
Subjt:  RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG

A0A1S3CFF6 ras-related protein Rab11C-like isoform X15.2e-41100Show/hide
Query:  RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG
        RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG
Subjt:  RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG

A0A1S3CFW6 ras-related protein Rab11C-like isoform X23.9e-44100Show/hide
Query:  MIGSYRNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG
        MIGSYRNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG
Subjt:  MIGSYRNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG

A0A5A7UGE0 Ras-related protein Rab11C-like isoform X25.2e-41100Show/hide
Query:  RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG
        RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG
Subjt:  RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG

A0A5A7V4N4 Ras-related protein Rab11C-like isoform X19.2e-2293.22Show/hide
Query:  LFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG
        LFKKSR ETAMAHKVDHEYDYLFKIVLI D DVGKSNILSRFTRNEFCLESKS IDLLG
Subjt:  LFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG

SwissProt top hitse value%identityAlignment
Q39434 Ras-related protein Rab2BV3.0e-1793.33Show/hide
Query:  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI
        MA++VDHEYDYLFKIVLIGDS VGKSNILSRFTRNEFCLESKSTI
Subjt:  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI

Q40193 Ras-related protein Rab11C4.6e-1895.56Show/hide
Query:  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI
        MAH+VDHEYDYLFKIVLIGDS VGKSNILSRFTRNEFCLESKSTI
Subjt:  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI

Q40523 Ras-related protein Rab11A6.6e-1791.11Show/hide
Query:  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI
        MA++VDHEYDYLFK+VLIGDS VGKSNILSRFTRNEFCLESKSTI
Subjt:  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI

Q96283 Ras-related protein RABA2c1.1e-1691.11Show/hide
Query:  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI
        M H+VD EYDYLFKIVLIGDS VGKSNILSRFTRNEFCLESKSTI
Subjt:  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI

Q9LNW1 Ras-related protein RABA2b3.9e-1791.11Show/hide
Query:  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI
        MA+++DHEYDYLFKIVLIGDS VGKSNILSRFTRNEFCLESKSTI
Subjt:  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI

Arabidopsis top hitse value%identityAlignment
AT1G07410.1 RAB GTPase homolog A2B2.8e-1891.11Show/hide
Query:  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI
        MA+++DHEYDYLFKIVLIGDS VGKSNILSRFTRNEFCLESKSTI
Subjt:  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI

AT1G09630.1 RAB GTPase 11C2.6e-1684.44Show/hide
Query:  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI
        MA + D EYDYLFK+VLIGDS VGKSN+LSRFTRNEFCLESKSTI
Subjt:  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI

AT3G46830.1 RAB GTPase homolog A2C8.0e-1891.11Show/hide
Query:  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI
        M H+VD EYDYLFKIVLIGDS VGKSNILSRFTRNEFCLESKSTI
Subjt:  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI

AT5G59150.1 RAB GTPase homolog A2D4.0e-1786.67Show/hide
Query:  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI
        MAH+V+ +YDYLFKIVLIGDS VGK+NILSRFTRNEFCLESKSTI
Subjt:  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI

AT5G60860.1 RAB GTPase homolog A1F6.3e-1581.82Show/hide
Query:  AHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI
        A++ D EYDYLFK+VLIGDS VGKSN+LSRFTRNEF LESKSTI
Subjt:  AHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGGTTCTTATAGAAATGAAACAAATTTTTGCTCTTATGGCAAAGTAAACAGAGAAGTTCAAGTGCACTGCCCACCAAGAGGTTTGTTCAAGAAATCTAGGGCAGA
GACTGCTATGGCTCATAAGGTAGACCACGAGTATGATTATTTGTTTAAGATTGTTCTGATTGGGGATTCCGACGTTGGGAAGTCCAACATTCTTTCGAGATTTACTAGAA
ACGAGTTTTGCTTGGAGTCCAAATCCACCATTGATCTTTTGGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTGGTTCTTATAGAAATGAAACAAATTTTTGCTCTTATGGCAAAGTAAACAGAGAAGTTCAAGTGCACTGCCCACCAAGAGGTTTGTTCAAGAAATCTAGGGCAGA
GACTGCTATGGCTCATAAGGTAGACCACGAGTATGATTATTTGTTTAAGATTGTTCTGATTGGGGATTCCGACGTTGGGAAGTCCAACATTCTTTCGAGATTTACTAGAA
ACGAGTTTTGCTTGGAGTCCAAATCCACCATTGATCTTTTGGGTTAG
Protein sequenceShow/hide protein sequence
MIGSYRNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG