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IVF0013539 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013539
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description30S ribosomal protein S31, chloroplastic
Genome locationchr08:30072090..30073177
RNA-Seq ExpressionIVF0013539
SyntenyIVF0013539
Gene Ontology termsGO:0032544 - plastid translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR030826 - 30S ribosomal protein
IPR044695 - 30S ribosomal protein S31, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147884.1 30S ribosomal protein S31, chloroplastic [Cucumis sativus]3.39e-6890.98Show/hide
Query:  MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
        M SLPFGLLQAPSQSP     +FSFSKSE LGTSLRASSTASLAISTPSSPSSIPA+YCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
Subjt:  MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDDEKIKIEIDESLFAS
        RKDKFDD+EKIKIEIDESLF S
Subjt:  RKDKFDDDEKIKIEIDESLFAS

XP_008449316.1 PREDICTED: 30S ribosomal protein S31, chloroplastic [Cucumis melo]1.16e-78100Show/hide
Query:  MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
        MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
Subjt:  MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDDEKIKIEIDESLFAS
        RKDKFDDDEKIKIEIDESLFAS
Subjt:  RKDKFDDDEKIKIEIDESLFAS

XP_022151467.1 30S ribosomal protein S31, chloroplastic [Momordica charantia]5.44e-6587.6Show/hide
Query:  MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
        M SLPFGLLQA SQSP+L+P +FSFSKSETLGTSLRAS TASLA S  SSPSS+PAVYCGRGDKKTE+GKRFNHSYGNARPRDKTKGRGTPRVPTPP+PP
Subjt:  MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDDEKIKIEIDESLFA
        RKDKF+DDEKIKIEID+SLFA
Subjt:  RKDKFDDDEKIKIEIDESLFA

XP_023517799.1 30S ribosomal protein S31, chloroplastic [Cucurbita pepo subsp. pepo]2.02e-6083.47Show/hide
Query:  MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
        M SLPFGLLQA  QSP+L+P  FSFSKSETLGTSLR S+     IS  SSPSSIPAVYCGRGDKKTE+GKRF HS+GNARPRDKTKGRGTPRVPTPPSPP
Subjt:  MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDDEKIKIEIDESLFA
        RKDKFDDDEKIKIEIDESLF+
Subjt:  RKDKFDDDEKIKIEIDESLFA

XP_038882305.1 30S ribosomal protein S31, chloroplastic [Benincasa hispida]5.49e-6889.34Show/hide
Query:  MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
        M SLPFGLLQA SQSP+L+P +FSFSKSETLGTSLRASSTASLA ST SSPSSIPAVYCGRGDKKTE+GKRFN SYGNARPR+KTKGRGTPRVPTPPSPP
Subjt:  MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDDEKIKIEIDESLFAS
        RKDKF+DDEKIKIEIDESLFA+
Subjt:  RKDKFDDDEKIKIEIDESLFAS

TrEMBL top hitse value%identityAlignment
A0A0A0KXY4 Uncharacterized protein2.6e-5190.98Show/hide
Query:  MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
        M SLPFGLLQAPSQS    P +FSFSKSE LGTSLRASSTASLAISTPSSPSSIPA+YCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
Subjt:  MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDDEKIKIEIDESLFAS
        RKDKFDD+EKIKIEIDESLF S
Subjt:  RKDKFDDDEKIKIEIDESLFAS

A0A1S3BL51 30S ribosomal protein S31, chloroplastic2.6e-59100Show/hide
Query:  MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
        MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
Subjt:  MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDDEKIKIEIDESLFAS
        RKDKFDDDEKIKIEIDESLFAS
Subjt:  RKDKFDDDEKIKIEIDESLFAS

A0A5A7TU27 30S ribosomal protein S312.6e-59100Show/hide
Query:  MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
        MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
Subjt:  MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDDEKIKIEIDESLFAS
        RKDKFDDDEKIKIEIDESLFAS
Subjt:  RKDKFDDDEKIKIEIDESLFAS

A0A6J1DDL3 30S ribosomal protein S31, chloroplastic2.5e-4987.6Show/hide
Query:  MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
        M SLPFGLLQA SQSP+L+P +FSFSKSETLGTSLRA STASLA S  SSPSS+PAVYCGRGDKKTE+GKRFNHSYGNARPRDKTKGRGTPRVPTPP+PP
Subjt:  MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDDEKIKIEIDESLFA
        RKDKF+DDEKIKIEID+SLFA
Subjt:  RKDKFDDDEKIKIEIDESLFA

A0A6J1HRX4 30S ribosomal protein S31, chloroplastic8.3e-4582.64Show/hide
Query:  MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
        M SLPFGLLQA  QSP+L+P  FSFSKSETLGTSLR S+      S  SSPSSIPAVYCGRGDKKTE+GKRF HS+GNARPRDKTKGRGTPRVPTPPSPP
Subjt:  MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDDEKIKIEIDESLFA
        RKDKFDDDEKIKIEIDESLF+
Subjt:  RKDKFDDDEKIKIEIDESLFA

SwissProt top hitse value%identityAlignment
O80439 30S ribosomal protein S31, chloroplastic6.8e-2860.66Show/hide
Query:  MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
        M SL  G    P  + +L     S S SET G SL +  T   ++ST SS SSIP VYCGRGD+KT +GKRFNHS+GNARPR+K+KGRG  RVP PP+PP
Subjt:  MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDDEKIKIEIDESLFAS
        RKDKF++DEKIKI+IDESLF++
Subjt:  RKDKFDDDEKIKIEIDESLFAS

P47909 30S ribosomal protein S31, mitochondrial2.8e-0557.41Show/hide
Query:  PSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARP-RDKTKGRGTPRVPTPPSPP
        P   +   AV CGRGDKKT+RGKRF  SYGNARP R+K   R   RV  P S P
Subjt:  PSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARP-RDKTKGRGTPRVPTPPSPP

P47910 30S ribosomal protein S31, chloroplastic1.1e-1450.53Show/hide
Query:  SPSLNPH--YFSFSKSETL-GTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFD
        +PS+  H   FSFS S+++ G SL +  T SL+ S  +SP ++P +YCGRGD+KT +GKRFNHS+GNARP++K KGRG P+ P  P      K D
Subjt:  SPSLNPH--YFSFSKSETL-GTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFD

Arabidopsis top hitse value%identityAlignment
AT2G38140.1 plastid-specific ribosomal protein 44.8e-2960.66Show/hide
Query:  MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
        M SL  G    P  + +L     S S SET G SL +  T   ++ST SS SSIP VYCGRGD+KT +GKRFNHS+GNARPR+K+KGRG  RVP PP+PP
Subjt:  MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDDEKIKIEIDESLFAS
        RKDKF++DEKIKI+IDESLF++
Subjt:  RKDKFDDDEKIKIEIDESLFAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATCTCTTCCTTTCGGACTTCTTCAGGCTCCATCTCAATCTCCATCTCTCAATCCTCATTACTTCTCTTTCTCCAAGTCTGAAACCCTAGGAACATCTCTTCGTGC
TTCTTCTACGGCTTCTCTTGCAATCTCTACACCTTCATCTCCTTCTTCAATTCCTGCTGTATATTGTGGCAGAGGCGATAAGAAAACGGAAAGAGGAAAGCGGTTCAATC
ATTCGTATGGAAATGCGAGGCCTCGGGACAAGACCAAGGGGAGAGGGACTCCGAGAGTACCAACTCCTCCTTCTCCACCTAGGAAGGATAAATTTGACGACGACGAGAAA
ATCAAGATCGAGATTGACGAGTCTCTTTTTGCTAGCTAG
mRNA sequenceShow/hide mRNA sequence
CCAGTGAGCTCCCCATATTTTGCCAGCCATCCATCCAATTCCCCTTTTAAACAAACCCACTCGACAGCTAACTAATAGCTCTTATTGAACGACATGTCGTTTGCAAAGAG
CGCCAATCTTATATCTTTTTCGGAGCTCCGAAAACCCGCCCGGGTTAACTATAAAATCAGGACCATATCCATCACATTCTCCACTCGAAACTTATCCTTCTGATTCTCTC
ACAAGCGCTTGCTCGCTCTGCTTCATCTTCATCCATCCATGGGATCTCTTCCTTTCGGACTTCTTCAGGCTCCATCTCAATCTCCATCTCTCAATCCTCATTACTTCTCT
TTCTCCAAGTCTGAAACCCTAGGAACATCTCTTCGTGCTTCTTCTACGGCTTCTCTTGCAATCTCTACACCTTCATCTCCTTCTTCAATTCCTGCTGTATATTGTGGCAG
AGGCGATAAGAAAACGGAAAGAGGAAAGCGGTTCAATCATTCGTATGGAAATGCGAGGCCTCGGGACAAGACCAAGGGGAGAGGGACTCCGAGAGTACCAACTCCTCCTT
CTCCACCTAGGAAGGATAAATTTGACGACGACGAGAAAATCAAGATCGAGATTGACGAGTCTCTTTTTGCTAGCTAGTCATGGAACAATCTAATTCTGTTTATTTGAATG
TGTTTTCTTAATTCAGAAGGTACTTCCACTTCTTCTAATAGCATTATTTTGTATGAATTCTTCAGTTGCTTATCAGCTTCTTGAATGTGTTGTTCGTTTTGAGTCAAACT
CCAAGTACGGCCTCTCTATCTTTGTCTTTAACCATTTCGGAGCAGGAGTCTAAGCATCAATGCTTTATAGATAGTCTTTGCGTCAATACAGGCGTTTGTTTCAAAAGGAA
TTTAAGTTCACTTCCG
Protein sequenceShow/hide protein sequence
MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEK
IKIEIDESLFAS