CuGenDBv2

Gene ID	IVF0013544
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	tetratricopeptide repeat protein SKI3
Genome location	chr07:95816..100911
RNA-Seq Expression	IVF0013544
Synteny	IVF0013544
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0034427 - nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' (biological process) GO:0055087 - Ski complex (cellular component) GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	IPR039226 - Ski3/TTC37

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0064684.1 tetratricopeptide repeat protein SKI3 [Cucumis melo var. makuwa]

0.0

99.8

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Query:  MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE
        MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE
Subjt:  MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE

Query:  RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH
        RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH
Subjt:  RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH

Query:  LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN
        LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN
Subjt:  LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN

Query:  YLGWVCLKFIASRYELHDESNILELSLKKWSVESKSLQHMVMPMFVDGLISFGSQDFVAAEKYFAQACFSGHDGCLLLCHGVTCMELARQLCSPHFLRLA
        YLGWVCLKFIASRYELHDESNILELSLKKWSVESKSLQHMVMPMFVDGLISFGSQDFVAAEKYFAQACFSGHDGCLLLCHGVTCMELARQLCSPHFLRLA
Subjt:  YLGWVCLKFIASRYELHDESNILELSLKKWSVESKSLQHMVMPMFVDGLISFGSQDFVAAEKYFAQACFSGHDGCLLLCHGVTCMELARQLCSPHFLRLA

Query:  VNSLLKAQVISVPIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFKVEICQSPLRWVLRAIHV
        VNSLLKAQVISVPIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFKVEICQSPLRWVLRAIH+
Subjt:  VNSLLKAQVISVPIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFKVEICQSPLRWVLRAIHV

XP_008453040.1 PREDICTED: tetratricopeptide repeat protein SKI3 [Cucumis melo]

0.0

100

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Query:  MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE
        MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE
Subjt:  MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE

Query:  RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH
        RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH
Subjt:  RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH

Query:  LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN
        LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN
Subjt:  LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN

Query:  YLGWVCLKFIASRYELHDESNILELSLKKWSVESKSLQHMVMPMFVDGLISFGSQDFVAAEKYFAQACFSGHDGCLLLCHGVTCMELARQLCSPHFLRLA
        YLGWVCLKFIASRYELHDESNILELSLKKWSVESKSLQHMVMPMFVDGLISFGSQDFVAAEKYFAQACFSGHDGCLLLCHGVTCMELARQLCSPHFLRLA
Subjt:  YLGWVCLKFIASRYELHDESNILELSLKKWSVESKSLQHMVMPMFVDGLISFGSQDFVAAEKYFAQACFSGHDGCLLLCHGVTCMELARQLCSPHFLRLA

Query:  VNSLLKAQVISVPIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFKVEICQSPLRWVLRAIHVNPSCVRYWNV
        VNSLLKAQVISVPIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFKVEICQSPLRWVLRAIHVNPSCVRYWNV
Subjt:  VNSLLKAQVISVPIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFKVEICQSPLRWVLRAIHVNPSCVRYWNV

Query:  LQSLWNEG
        LQSLWNEG
Subjt:  LQSLWNEG

XP_011654295.1 tetratricopeptide repeat protein SKI3 [Cucumis sativus]

0.0

93.9

Show/hide

Query:  MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE
        MPTNFFQSSKLSF+VAAVHALD  DRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSS IRNLLGYLLLSNEE
Subjt:  MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE

Query:  RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH
        RDD HTATRCCNMLYG DQQNKGLKSA+EIHGAGAVACYTIGTSHPRF+FPTCSYQC+NGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH
Subjt:  RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH

Query:  LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN
        LCVTI RLIL+AF DE YFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASS+SLPEIYLFYAHLLLCRAYAAENDSNNLRKEF+KCL+LKTDN
Subjt:  LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN

Query:  YLGWVCLKFIASRYELHDESNILELSLKKWSVESKSLQHMVMPMFVDGLISFGSQDFVAAEKYFAQACFSGHDGCLLLCHGVTCMELARQLCSPHFLRLA
        YLG VCLKFIASRYELHDESNILELSLKKWS ESK+LQHMV+PMFVDGLISF SQDF+AAEKYFAQACFSGHDGCL LCHGVTCMELA++LCSPHFLRLA
Subjt:  YLGWVCLKFIASRYELHDESNILELSLKKWSVESKSLQHMVMPMFVDGLISFGSQDFVAAEKYFAQACFSGHDGCLLLCHGVTCMELARQLCSPHFLRLA

Query:  VNSLLKAQVISVPIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFKVEICQSPLRWVLRAIHVNPSCVRYWNV
        VNSLLKAQVISVPIPIVSIMLAQAEGSLGLKENWESGLRLEW SWPPD RSAEILFQMHLLAKQSKV SDQ +VE+CQSPLRWVLRAIHVNPSCVRYWNV
Subjt:  VNSLLKAQVISVPIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFKVEICQSPLRWVLRAIHVNPSCVRYWNV

Query:  LQSLWNEG
        LQSLWNEG
Subjt:  LQSLWNEG

XP_038898487.1 tetratricopeptide repeat protein SKI3 isoform X1 [Benincasa hispida]

0.0

88.67

Show/hide

Query:  MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE
        MPTNFFQSSK+SF+VAAVHALD  DRLE+IVLSSRS LQSHE+ITRMH LIALSKLIKY+TNNCLGFLNGVMHLRKALHAYP+SSLIRNLLGYLLLSN+E
Subjt:  MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE

Query:  RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH
        RDD HTATRCCNM+YGFDQQNKGLKSA+EIHGAGAVACYTIGTS PRF+FPTCSYQCQ+GIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH
Subjt:  RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH

Query:  LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN
        L VTIERLIL+AFS+E YF KD SHQYKKFQLLLCASEISLQGG QIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEF+KC+DLKTDN
Subjt:  LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN

Query:  YLGWVCLKFIASRYELHDESNILELSLKKWSVESKSLQHMVMPMF--VDGLISFGSQDFVAAEKYFAQACFSGHD-GCLLLCHGVTCMELARQLCSPHFL
        YLGW CLKFIA  YELHDES++LE S KK SVESK+LQHM +P F  VDGLISF SQDFVAAEKYFAQAC  GHD GCLLLCHGVTCMELA+QLCS HFL
Subjt:  YLGWVCLKFIASRYELHDESNILELSLKKWSVESKSLQHMVMPMF--VDGLISFGSQDFVAAEKYFAQACFSGHD-GCLLLCHGVTCMELARQLCSPHFL

Query:  RLAVNSLLKAQVISV-PIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFKVEICQSPLRWVLRAIHVNPSCVR
        RLAV+SLLKAQVISV PIPIVSI LAQAEGSLGLKENWESGLR EW SWPPDMRSAE+LFQMHLLAKQSKV SDQ +VE+CQSPLRWVLRAIHVNPSC+R
Subjt:  RLAVNSLLKAQVISV-PIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFKVEICQSPLRWVLRAIHVNPSCVR

Query:  YWNVLQSLWNEG
        YW VLQSLWNEG
Subjt:  YWNVLQSLWNEG

XP_038898489.1 tetratricopeptide repeat protein SKI3 isoform X3 [Benincasa hispida]

0.0

88.67

Show/hide

Query:  MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE
        MPTNFFQSSK+SF+VAAVHALD  DRLE+IVLSSRS LQSHE+ITRMH LIALSKLIKY+TNNCLGFLNGVMHLRKALHAYP+SSLIRNLLGYLLLSN+E
Subjt:  MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE

Query:  RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH
        RDD HTATRCCNM+YGFDQQNKGLKSA+EIHGAGAVACYTIGTS PRF+FPTCSYQCQ+GIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH
Subjt:  RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH

Query:  LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN
        L VTIERLIL+AFS+E YF KD SHQYKKFQLLLCASEISLQGG QIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEF+KC+DLKTDN
Subjt:  LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN

Query:  YLGWVCLKFIASRYELHDESNILELSLKKWSVESKSLQHMVMPMF--VDGLISFGSQDFVAAEKYFAQACFSGHD-GCLLLCHGVTCMELARQLCSPHFL
        YLGW CLKFIA  YELHDES++LE S KK SVESK+LQHM +P F  VDGLISF SQDFVAAEKYFAQAC  GHD GCLLLCHGVTCMELA+QLCS HFL
Subjt:  YLGWVCLKFIASRYELHDESNILELSLKKWSVESKSLQHMVMPMF--VDGLISFGSQDFVAAEKYFAQACFSGHD-GCLLLCHGVTCMELARQLCSPHFL

Query:  RLAVNSLLKAQVISV-PIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFKVEICQSPLRWVLRAIHVNPSCVR
        RLAV+SLLKAQVISV PIPIVSI LAQAEGSLGLKENWESGLR EW SWPPDMRSAE+LFQMHLLAKQSKV SDQ +VE+CQSPLRWVLRAIHVNPSC+R
Subjt:  RLAVNSLLKAQVISV-PIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFKVEICQSPLRWVLRAIHVNPSCVR

Query:  YWNVLQSLWNEG
        YW VLQSLWNEG
Subjt:  YWNVLQSLWNEG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L4Q4 Uncharacterized protein

3.0e-282

93.9

Show/hide

Query:  MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE
        MPTNFFQSSKLSF+VAAVHALD  DRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSS IRNLLGYLLLSNEE
Subjt:  MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE

Query:  RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH
        RDD HTATRCCNMLYG DQQNKGLKSA+EIHGAGAVACYTIGTSHPRF+FPTCSYQC+NGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH
Subjt:  RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH

Query:  LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN
        LCVTI RLIL+AF DE YFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASS+SLPEIYLFYAHLLLCRAYAAENDSNNLRKEF+KCL+LKTDN
Subjt:  LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN

Query:  YLGWVCLKFIASRYELHDESNILELSLKKWSVESKSLQHMVMPMFVDGLISFGSQDFVAAEKYFAQACFSGHDGCLLLCHGVTCMELARQLCSPHFLRLA
        YLG VCLKFIASRYELHDESNILELSLKKWS ESK+LQHMV+PMFVDGLISF SQDF+AAEKYFAQACFSGHDGCL LCHGVTCMELA++LCSPHFLRLA
Subjt:  YLGWVCLKFIASRYELHDESNILELSLKKWSVESKSLQHMVMPMFVDGLISFGSQDFVAAEKYFAQACFSGHDGCLLLCHGVTCMELARQLCSPHFLRLA

Query:  VNSLLKAQVISVPIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFKVEICQSPLRWVLRAIHVNPSCVRYWNV
        VNSLLKAQVISVPIPIVSIMLAQAEGSLGLKENWESGLRLEW SWPPD RSAEILFQMHLLAKQSKV SDQ +VE+CQSPLRWVLRAIHVNPSCVRYWNV
Subjt:  VNSLLKAQVISVPIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFKVEICQSPLRWVLRAIHVNPSCVRYWNV

Query:  LQSLWNEG
        LQSLWNEG
Subjt:  LQSLWNEG

A0A1S3BVA5 tetratricopeptide repeat protein SKI3

2.4e-300

100

Show/hide

Query:  MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE
        MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE
Subjt:  MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE

Query:  RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH
        RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH
Subjt:  RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH

Query:  LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN
        LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN
Subjt:  LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN

Query:  YLGWVCLKFIASRYELHDESNILELSLKKWSVESKSLQHMVMPMFVDGLISFGSQDFVAAEKYFAQACFSGHDGCLLLCHGVTCMELARQLCSPHFLRLA
        YLGWVCLKFIASRYELHDESNILELSLKKWSVESKSLQHMVMPMFVDGLISFGSQDFVAAEKYFAQACFSGHDGCLLLCHGVTCMELARQLCSPHFLRLA
Subjt:  YLGWVCLKFIASRYELHDESNILELSLKKWSVESKSLQHMVMPMFVDGLISFGSQDFVAAEKYFAQACFSGHDGCLLLCHGVTCMELARQLCSPHFLRLA

Query:  VNSLLKAQVISVPIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFKVEICQSPLRWVLRAIHVNPSCVRYWNV
        VNSLLKAQVISVPIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFKVEICQSPLRWVLRAIHVNPSCVRYWNV
Subjt:  VNSLLKAQVISVPIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFKVEICQSPLRWVLRAIHVNPSCVRYWNV

Query:  LQSLWNEG
        LQSLWNEG
Subjt:  LQSLWNEG

A0A5A7VBR1 Tetratricopeptide repeat protein SKI3

2.4e-287

99.8

Show/hide

Query:  MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE
        MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE
Subjt:  MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE

Query:  RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH
        RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH
Subjt:  RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH

Query:  LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN
        LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN
Subjt:  LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN

Query:  YLGWVCLKFIASRYELHDESNILELSLKKWSVESKSLQHMVMPMFVDGLISFGSQDFVAAEKYFAQACFSGHDGCLLLCHGVTCMELARQLCSPHFLRLA
        YLGWVCLKFIASRYELHDESNILELSLKKWSVESKSLQHMVMPMFVDGLISFGSQDFVAAEKYFAQACFSGHDGCLLLCHGVTCMELARQLCSPHFLRLA
Subjt:  YLGWVCLKFIASRYELHDESNILELSLKKWSVESKSLQHMVMPMFVDGLISFGSQDFVAAEKYFAQACFSGHDGCLLLCHGVTCMELARQLCSPHFLRLA

Query:  VNSLLKAQVISVPIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFKVEICQSPLRWVLRAIHV
        VNSLLKAQVISVPIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFKVEICQSPLRWVLRAIH+
Subjt:  VNSLLKAQVISVPIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFKVEICQSPLRWVLRAIHV

A0A6J1F7C5 tetratricopeptide repeat protein SKI3 isoform X1

2.0e-262

87.5

Show/hide

Query:  MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE
        MPT+FF+SSK+SF+VAA+HA+D  DRL++IVLS RSCLQSHEEIT+MH LIA SKLIK++T+NCLGF +GVMHLRKALHAYP+SSL+RNLLGYLLLSNEE
Subjt:  MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE

Query:  RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH
        RDD HTATRCCNMLYGFDQQNKGLKSA+EIHGAGAVACYTIGTSHPRF+FPTCSYQCQNGIGTIRQLQKCLRQ+PWNYDARYLLILNILQKAREERFPCH
Subjt:  RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH

Query:  LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN
        L  TIERLIL+AFS+EPYF KD SHQYKKFQLLLCASEISLQG DQIKCINYAKAASSISLP+ YLFYAHLLLCRAYAAENDSNNLR EFIKCLDLKTDN
Subjt:  LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN

Query:  YLGWVCLKFIASRYELHDESNILELSLKKWSVESKSLQHMVMPM--FVDGLISFGSQDFVAAEKYFAQACFSGH-DGCLLLCHGVTCMELARQLCSPHFL
        YLGWVCLKFIASRYELH ESN LELS KK SVESK LQHMV+P+   VDGLISF SQDF+AAEKYFAQAC SGH DGCLLLCHGVTCMELA+QLCSPHFL
Subjt:  YLGWVCLKFIASRYELHDESNILELSLKKWSVESKSLQHMVMPM--FVDGLISFGSQDFVAAEKYFAQACFSGH-DGCLLLCHGVTCMELARQLCSPHFL

Query:  RLAVNSLLKAQVIS-VPIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFKVEICQSPLRWVLRAIHVNPSCVR
        RLAVNSLLKAQVIS VPIP+VSI LAQAEGSLGLKENWESGLR EW SWPPDMR AE+LFQMHLLAKQSKV  DQ +VE+CQSPLRWVLRAIHVNPSC+R
Subjt:  RLAVNSLLKAQVIS-VPIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFKVEICQSPLRWVLRAIHVNPSCVR

Query:  YWNVLQSLWNEG
        YW VLQSLWNEG
Subjt:  YWNVLQSLWNEG

A0A6J1FCN2 tetratricopeptide repeat protein SKI3 isoform X2

2.0e-262

87.5

Show/hide

Query:  MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE
        MPT+FF+SSK+SF+VAA+HA+D  DRL++IVLS RSCLQSHEEIT+MH LIA SKLIK++T+NCLGF +GVMHLRKALHAYP+SSL+RNLLGYLLLSNEE
Subjt:  MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE

Query:  RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH
        RDD HTATRCCNMLYGFDQQNKGLKSA+EIHGAGAVACYTIGTSHPRF+FPTCSYQCQNGIGTIRQLQKCLRQ+PWNYDARYLLILNILQKAREERFPCH
Subjt:  RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH

Query:  LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN
        L  TIERLIL+AFS+EPYF KD SHQYKKFQLLLCASEISLQG DQIKCINYAKAASSISLP+ YLFYAHLLLCRAYAAENDSNNLR EFIKCLDLKTDN
Subjt:  LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN

Query:  YLGWVCLKFIASRYELHDESNILELSLKKWSVESKSLQHMVMPM--FVDGLISFGSQDFVAAEKYFAQACFSGH-DGCLLLCHGVTCMELARQLCSPHFL
        YLGWVCLKFIASRYELH ESN LELS KK SVESK LQHMV+P+   VDGLISF SQDF+AAEKYFAQAC SGH DGCLLLCHGVTCMELA+QLCSPHFL
Subjt:  YLGWVCLKFIASRYELHDESNILELSLKKWSVESKSLQHMVMPM--FVDGLISFGSQDFVAAEKYFAQACFSGH-DGCLLLCHGVTCMELARQLCSPHFL

Query:  RLAVNSLLKAQVIS-VPIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFKVEICQSPLRWVLRAIHVNPSCVR
        RLAVNSLLKAQVIS VPIP+VSI LAQAEGSLGLKENWESGLR EW SWPPDMR AE+LFQMHLLAKQSKV  DQ +VE+CQSPLRWVLRAIHVNPSC+R
Subjt:  RLAVNSLLKAQVIS-VPIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFKVEICQSPLRWVLRAIHVNPSCVR

Query:  YWNVLQSLWNEG
        YW VLQSLWNEG
Subjt:  YWNVLQSLWNEG

SwissProt top hits

e value

%identity

Alignment

F4I3Z5 Tetratricopeptide repeat protein SKI3

7.2e-148

54.22

Show/hide

Query:  MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE
        MP +FFQSSK+SF+V+A+H+LD SDRL++IV S+RS + S EEI  MH LIALSKL+K    + LG+  G+ HL KA+H YP S+LIRNLLGY+LL+ E 
Subjt:  MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE

Query:  RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH
          D  TA+RCC +        +GLKSA E+ G G+VAC  IG + PRF+FPTC  Q  N    + +LQ+ L QEP N   RYLLILN++QKARE+RFP  
Subjt:  RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH

Query:  LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN
        LC  IERLI +A SDE   T     +YKKFQLLLCASEISLQ G+  + IN+A+ ASS+SLP  YLF  HL LCRAYAA   + N+++E+  CL+LKTD+
Subjt:  LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN

Query:  YLGWVCLKFIASRYELHDESNILELSLKKWSVESKS--LQHMVMPMFVDGLISFGSQDFVAAEKYFAQAC-FSGHDGCLLLCHGVTCMELARQLCSPHFL
         +GW+CLK I S+Y L  ++N+LE+SL++ S + K+   + M +     GL S G +DF +AE++ AQAC     + CLLLCHG  CMELARQ     FL
Subjt:  YLGWVCLKFIASRYELHDESNILELSLKKWSVESKS--LQHMVMPMFVDGLISFGSQDFVAAEKYFAQAC-FSGHDGCLLLCHGVTCMELARQLCSPHFL

Query:  RLAVNSLLKAQVISV-PIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFK-VEICQSPLRWVLRAIHVNPSCV
         LAV SL K Q  S+ P+PIV  +LAQA GSLG KE WE  LRLEW  WPP+MR AE+ FQMH+LA+QS+   +    +E  QSP +WV+RAIH +PSC 
Subjt:  RLAVNSLLKAQVISV-PIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFK-VEICQSPLRWVLRAIHVNPSCV

Query:  RYWNVLQSL
        RYW VL  L
Subjt:  RYWNVLQSL

Arabidopsis top hits

e value

%identity

Alignment

AT1G76630.1 Tetratricopeptide repeat (TPR)-like superfamily protein

5.1e-149

54.22

Show/hide

Query:  MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE
        MP +FFQSSK+SF+V+A+H+LD SDRL++IV S+RS + S EEI  MH LIALSKL+K    + LG+  G+ HL KA+H YP S+LIRNLLGY+LL+ E 
Subjt:  MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE

Query:  RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH
          D  TA+RCC +        +GLKSA E+ G G+VAC  IG + PRF+FPTC  Q  N    + +LQ+ L QEP N   RYLLILN++QKARE+RFP  
Subjt:  RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH

Query:  LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN
        LC  IERLI +A SDE   T     +YKKFQLLLCASEISLQ G+  + IN+A+ ASS+SLP  YLF  HL LCRAYAA   + N+++E+  CL+LKTD+
Subjt:  LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN

Query:  YLGWVCLKFIASRYELHDESNILELSLKKWSVESKS--LQHMVMPMFVDGLISFGSQDFVAAEKYFAQAC-FSGHDGCLLLCHGVTCMELARQLCSPHFL
         +GW+CLK I S+Y L  ++N+LE+SL++ S + K+   + M +     GL S G +DF +AE++ AQAC     + CLLLCHG  CMELARQ     FL
Subjt:  YLGWVCLKFIASRYELHDESNILELSLKKWSVESKS--LQHMVMPMFVDGLISFGSQDFVAAEKYFAQAC-FSGHDGCLLLCHGVTCMELARQLCSPHFL

Query:  RLAVNSLLKAQVISV-PIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFK-VEICQSPLRWVLRAIHVNPSCV
         LAV SL K Q  S+ P+PIV  +LAQA GSLG KE WE  LRLEW  WPP+MR AE+ FQMH+LA+QS+   +    +E  QSP +WV+RAIH +PSC 
Subjt:  RLAVNSLLKAQVISV-PIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFK-VEICQSPLRWVLRAIHVNPSCV

Query:  RYWNVLQSL
        RYW VL  L
Subjt:  RYWNVLQSL

AT1G76630.2 Tetratricopeptide repeat (TPR)-like superfamily protein

5.1e-149

54.22

Show/hide

Query:  MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE
        MP +FFQSSK+SF+V+A+H+LD SDRL++IV S+RS + S EEI  MH LIALSKL+K    + LG+  G+ HL KA+H YP S+LIRNLLGY+LL+ E 
Subjt:  MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEE

Query:  RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH
          D  TA+RCC +        +GLKSA E+ G G+VAC  IG + PRF+FPTC  Q  N    + +LQ+ L QEP N   RYLLILN++QKARE+RFP  
Subjt:  RDDYHTATRCCNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCH

Query:  LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN
        LC  IERLI +A SDE   T     +YKKFQLLLCASEISLQ G+  + IN+A+ ASS+SLP  YLF  HL LCRAYAA   + N+++E+  CL+LKTD+
Subjt:  LCVTIERLILIAFSDEPYFTKDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDN

Query:  YLGWVCLKFIASRYELHDESNILELSLKKWSVESKS--LQHMVMPMFVDGLISFGSQDFVAAEKYFAQAC-FSGHDGCLLLCHGVTCMELARQLCSPHFL
         +GW+CLK I S+Y L  ++N+LE+SL++ S + K+   + M +     GL S G +DF +AE++ AQAC     + CLLLCHG  CMELARQ     FL
Subjt:  YLGWVCLKFIASRYELHDESNILELSLKKWSVESKS--LQHMVMPMFVDGLISFGSQDFVAAEKYFAQAC-FSGHDGCLLLCHGVTCMELARQLCSPHFL

Query:  RLAVNSLLKAQVISV-PIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFK-VEICQSPLRWVLRAIHVNPSCV
         LAV SL K Q  S+ P+PIV  +LAQA GSLG KE WE  LRLEW  WPP+MR AE+ FQMH+LA+QS+   +    +E  QSP +WV+RAIH +PSC 
Subjt:  RLAVNSLLKAQVISV-PIPIVSIMLAQAEGSLGLKENWESGLRLEWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFK-VEICQSPLRWVLRAIHVNPSCV

Query:  RYWNVLQSL
        RYW VL  L
Subjt:  RYWNVLQSL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCCGACCAATTTTTTCCAGAGTTCAAAATTGAGTTTTTTAGTGGCTGCTGTTCATGCCCTTGATCATAGTGATCGGCTTGAGGCCATTGTCTTAAGCAGCCGTTCCTG
CCTCCAATCTCATGAAGAGATCACTAGAATGCACAGTTTGATTGCTCTTTCTAAGCTGATCAAATATCGAACAAATAACTGCCTTGGATTCCTCAATGGAGTGATGCATC
TTCGAAAAGCTCTTCATGCATACCCCAGCAGTAGTTTGATCAGGAACTTGCTTGGTTATCTTTTGCTGTCCAACGAAGAAAGGGATGACTATCACACAGCTACTAGGTGC
TGCAACATGTTGTATGGTTTTGACCAACAGAACAAAGGTCTGAAATCGGCATTTGAAATTCATGGTGCTGGAGCTGTGGCCTGCTATACAATTGGCACGAGTCATCCGAG
GTTTACTTTCCCAACATGTTCGTATCAGTGCCAGAATGGGATTGGGACCATCCGTCAACTTCAAAAATGCTTACGTCAAGAGCCGTGGAATTATGATGCTCGATATCTTC
TTATACTAAACATTCTGCAGAAGGCACGTGAAGAAAGATTTCCCTGTCATCTATGTGTGACTATTGAGCGGCTAATCTTGATTGCCTTTTCTGATGAACCATATTTTACG
AAAGATGTGTCTCATCAATATAAGAAGTTTCAGCTTCTACTTTGTGCCTCTGAGATCAGTTTGCAGGGTGGTGACCAAATTAAATGTATCAACTATGCCAAAGCTGCTTC
CTCTATTTCACTTCCTGAAATTTATCTTTTTTATGCACACTTGTTACTGTGCCGAGCCTATGCTGCAGAAAATGATTCTAACAACCTTCGTAAAGAGTTCATAAAATGTT
TGGATTTGAAGACAGATAACTATCTTGGATGGGTATGTCTTAAATTCATTGCATCTCGATACGAGCTTCACGATGAATCCAATATCTTAGAACTTAGTTTGAAGAAATGG
TCTGTAGAGAGCAAGAGTCTGCAACACATGGTAATGCCCATGTTCGTCGACGGTTTGATATCCTTTGGGAGTCAGGATTTTGTGGCTGCAGAGAAGTATTTTGCACAAGC
TTGTTTTTCTGGACATGATGGTTGTCTCCTCCTCTGTCATGGTGTAACCTGCATGGAACTTGCAAGGCAGCTTTGCAGTCCTCATTTTTTGAGGTTGGCTGTGAACAGTC
TCCTTAAAGCTCAAGTGATTTCTGTTCCAATACCAATTGTCTCGATCATGCTGGCACAAGCAGAAGGGAGTCTTGGTTTGAAAGAAAATTGGGAGTCAGGCCTTCGTTTG
GAATGGTCCTCTTGGCCACCAGATATGAGGTCTGCGGAGATCTTGTTTCAAATGCATCTGCTTGCAAAACAGTCAAAAGTTGTTTCTGATCAATTCAAGGTTGAAATATG
TCAGTCTCCTCTGAGATGGGTTCTTCGCGCTATCCATGTAAACCCTTCTTGTGTGAGATACTGGAATGTGCTGCAAAGCTTGTGGAATGAGGGATGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MPTNFFQSSKLSFLVAAVHALDHSDRLEAIVLSSRSCLQSHEEITRMHSLIALSKLIKYRTNNCLGFLNGVMHLRKALHAYPSSSLIRNLLGYLLLSNEERDDYHTATRC
CNMLYGFDQQNKGLKSAFEIHGAGAVACYTIGTSHPRFTFPTCSYQCQNGIGTIRQLQKCLRQEPWNYDARYLLILNILQKAREERFPCHLCVTIERLILIAFSDEPYFT
KDVSHQYKKFQLLLCASEISLQGGDQIKCINYAKAASSISLPEIYLFYAHLLLCRAYAAENDSNNLRKEFIKCLDLKTDNYLGWVCLKFIASRYELHDESNILELSLKKW
SVESKSLQHMVMPMFVDGLISFGSQDFVAAEKYFAQACFSGHDGCLLLCHGVTCMELARQLCSPHFLRLAVNSLLKAQVISVPIPIVSIMLAQAEGSLGLKENWESGLRL
EWSSWPPDMRSAEILFQMHLLAKQSKVVSDQFKVEICQSPLRWVLRAIHVNPSCVRYWNVLQSLWNEG

IVF0013544 (gene) of Melon (IVF77) v1 genome