; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0013567 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013567
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNuclear cap-binding protein subunit 2
Genome locationchr07:9721189..9728533
RNA-Seq ExpressionIVF0013567
SyntenyIVF0013567
Gene Ontology termsGO:0045292 - mRNA cis splicing, via spliceosome (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005846 - nuclear cap binding complex (cellular component)
GO:0000339 - RNA cap binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR027157 - Nuclear cap-binding protein subunit 2
IPR034148 - NCBP2, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137136.1 nuclear cap-binding protein subunit 2 [Cucumis sativus]4.98e-17798.8Show/hide
Query:  MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDPTKLS+YRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMTQYGKHGGSHGHGHRHGRDYHHRKRYRD
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVM QYGKHGGSHGHG+RHGRDYHHRKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMTQYGKHGGSHGHGHRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_008464581.1 PREDICTED: nuclear cap-binding protein subunit 2 [Cucumis melo]3.65e-179100Show/hide
Query:  MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMTQYGKHGGSHGHGHRHGRDYHHRKRYRD
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMTQYGKHGGSHGHGHRHGRDYHHRKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMTQYGKHGGSHGHGHRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_022947066.1 nuclear cap-binding protein subunit 2-like [Cucurbita moschata]1.64e-16693.63Show/hide
Query:  MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDP+KLSVYRDRRF G+QDEFE AL +STTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMTQYGKHGGSHGHGHRHGRDYHHRKRYRD
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGT SLGSM PVM+Q+G HGGSHGHG+RHGRDYHHRKR+RD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMTQYGKHGGSHGHGHRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSD+ESRRNSN+ESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_022986365.1 nuclear cap-binding protein subunit 2-like isoform X1 [Cucurbita maxima]2.34e-16693.23Show/hide
Query:  MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDP+KLSVYRDRRF G+QDEFE+ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMTQYGKHGGSHGHGHRHGRDYHHRKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSM  V+ QYGKHGGSHG+GHRHGRDYH+RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMTQYGKHGGSHGHGHRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDY+SRRN ++ESRP+KNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_038900343.1 nuclear cap-binding protein subunit 2 [Benincasa hispida]7.32e-17297.2Show/hide
Query:  MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDPTKLSVYRDRRFHG+QDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMTQYGKHGGSHGHGHRHGRDYHHRKRYRD
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSM PVMTQYGKHGGSHGHGHRHGRDYHHRKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMTQYGKHGGSHGHGHRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR
        DDRHAHESSKRTSDYESRRN +++SRPEKNPRFRESGDSDEEDDDD+KQR
Subjt:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR

TrEMBL top hitse value%identityAlignment
A0A0A0KVX7 Nuclear cap-binding protein subunit 23.0e-13495.72Show/hide
Query:  MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDPTKLS+YRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPG------RGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMTQYGKHGGSHGHGHRHGRDYHH
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP        GGYGKLVQKELEAQRQLVDYGTGSLGSMAPVM QYGKHGGSHGHG+RHGRDYHH
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPG------RGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMTQYGKHGGSHGHGHRHGRDYHH

Query:  RKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
        RKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  RKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A1S3CLT9 Nuclear cap-binding protein subunit 23.1e-139100Show/hide
Query:  MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMTQYGKHGGSHGHGHRHGRDYHHRKRYRD
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMTQYGKHGGSHGHGHRHGRDYHHRKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMTQYGKHGGSHGHGHRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A6J1G5C4 Nuclear cap-binding protein subunit 21.3e-12993.63Show/hide
Query:  MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDP+KLSVYRDRRF G+QDEFE AL +STTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMTQYGKHGGSHGHGHRHGRDYHHRKRYRD
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGT SLGSM PVM+Q+G HGGSHGHG+RHGRDYHHRKR+RD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMTQYGKHGGSHGHGHRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSD+ESRRNSN+ESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A6J1I4R2 Nuclear cap-binding protein subunit 25.0e-12993.23Show/hide
Query:  MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDP+KLSVYRDRRF G+QDEFE AL +STTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMTQYGKHGGSHGHGHRHGRDYHHRKRYRD
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGT SLGSM PVM+Q+G HGGSHGHG+RHGRDYHHRKR+RD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMTQYGKHGGSHGHGHRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKR SD+ESRRNSN+ESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A6J1J7C7 Nuclear cap-binding protein subunit 21.7e-12993.23Show/hide
Query:  MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDP+KLSVYRDRRF G+QDEFE+ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMTQYGKHGGSHGHGHRHGRDYHHRKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSM  V+ QYGKHGGSHG+GHRHGRDYH+RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMTQYGKHGGSHGHGHRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDY+SRRN ++ESRP+KNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH

SwissProt top hitse value%identityAlignment
B1WC40 Nuclear cap-binding protein subunit 21.5e-5370.21Show/hide
Query:  KLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDF
        +LS YRD+ F G  +E E  L+ S T+YVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK  KT CGFCFV YYSR D E+A++YI+GT LDDR IR D+
Subjt:  KLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDF

Query:  DWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKE
        D GF++GRQ+GRGRSGGQVRDEYR DYD GRGGYGKL QK+
Subjt:  DWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKE

B7P877 Nuclear cap-binding protein subunit 28.7e-5468.79Show/hide
Query:  LSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFD
        LS YRD+ F GS+ E E  L+ STT+YVGNMSFYTTEEQ+YELFS+ G++KK+IMGLD+  KTPCGFCFV YY+RED E+A++Y++GT LDDR IR D+D
Subjt:  LSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFD

Query:  WGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKEL
         GF +GRQ+GRG+SGGQVRDEYRTDYD GRGGYGKL+ + +
Subjt:  WGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKEL

Q84L14 Nuclear cap-binding protein subunit 22.9e-9474Show/hide
Query:  MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDPTKLS YRDRRF G+Q+E+E ALQ S TVYVGNMSFYTTEEQ YELFSRAGEI+KIIMGLDKNSKTPCGFCF+LYYSRED EDAVKYISGT+L
Subjt:  MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMTQYGKHGGSHGHGHRHGRDYHHRKRYRD
        DDRPIRVDFDWGF++GRQWGRGRSGGQVRDEYRTDYDPGRGGYGK+VQKELEAQR+LVDYG G+    AP     G     +G  +R+ RDY  RKRYR+
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMTQYGKHGGSHGHGHRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR
        D+R    SS+R  D E +R++      EKNPRFRE GDSDEEDDD  K+R
Subjt:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR

Q9CQ49 Nuclear cap-binding protein subunit 21.5e-5370.21Show/hide
Query:  KLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDF
        +LS YRD+ F G  +E E  L+ S T+YVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK  KT CGFCFV YYSR D E+A++YI+GT LDDR IR D+
Subjt:  KLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDF

Query:  DWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKE
        D GF++GRQ+GRGRSGGQVRDEYR DYD GRGGYGKL QK+
Subjt:  DWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKE

Q9XFD1 Nuclear cap-binding protein subunit 21.8e-10476.17Show/hide
Query:  MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFK+  KLS YRDRRF G+Q+EF+ AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVM-TQYG---KHGGSHGHG--HRHGRDYHH
        DDRPIRVDFDWGFQ+GRQWGRGRSGGQVRDEYRTDYDP RGGYGKLVQKELEAQRQLVDYGTGSLG+      T YG   + GG++G G  +RHGR  +H
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVM-TQYG---KHGGSHGHG--HRHGRDYHH

Query:  RKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR
        RKR RDDDR+  ++S+R +D+ESRR+++ + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  RKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR

Arabidopsis top hitse value%identityAlignment
AT1G66260.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-0832.91Show/hide
Query:  LQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVD
        ++  TTVY+ N+    T E + EL++  GE+K+  +  DKN + P G   V+Y  R D   A++  +  +LD RP++++
Subjt:  LQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVD

AT1G66260.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-0832.91Show/hide
Query:  LQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVD
        ++  TTVY+ N+    T E + EL++  GE+K+  +  DKN + P G   V+Y  R D   A++  +  +LD RP++++
Subjt:  LQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVD

AT3G46020.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.7e-0934.57Show/hide
Query:  VALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVD
        +A + S  ++V  +S YTT++ + +LFS  G+IK+  +  D  ++ P GF F+ + S +D   A+K + G I+D R I V+
Subjt:  VALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVD

AT5G44200.1 CAP-binding protein 201.3e-10576.17Show/hide
Query:  MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFK+  KLS YRDRRF G+Q+EF+ AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVM-TQYG---KHGGSHGHG--HRHGRDYHH
        DDRPIRVDFDWGFQ+GRQWGRGRSGGQVRDEYRTDYDP RGGYGKLVQKELEAQRQLVDYGTGSLG+      T YG   + GG++G G  +RHGR  +H
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVM-TQYG---KHGGSHGHG--HRHGRDYHH

Query:  RKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR
        RKR RDDDR+  ++S+R +D+ESRR+++ + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  RKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR

AT5G44200.2 CAP-binding protein 201.3e-10576.17Show/hide
Query:  MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFK+  KLS YRDRRF G+Q+EF+ AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVM-TQYG---KHGGSHGHG--HRHGRDYHH
        DDRPIRVDFDWGFQ+GRQWGRGRSGGQVRDEYRTDYDP RGGYGKLVQKELEAQRQLVDYGTGSLG+      T YG   + GG++G G  +RHGR  +H
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVM-TQYG---KHGGSHGHG--HRHGRDYHH

Query:  RKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR
        RKR RDDDR+  ++S+R +D+ESRR+++ + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  RKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGTTGTTCAAGGACCCAACAAAGCTATCTGTTTATCGGGATAGAAGATTTCATGGATCACAAGATGAATTTGAAGTGGCACTTCAGACTTCAACCACTGTTTA
TGTGGGAAATATGTCCTTTTATACGACAGAAGAGCAAGTATATGAGCTTTTTTCTCGAGCTGGAGAAATTAAAAAGATAATCATGGGTTTGGATAAGAATTCAAAAACGC
CTTGTGGCTTTTGTTTTGTCCTATACTATTCTCGGGAGGATACCGAGGATGCTGTTAAATATATAAGTGGAACAATTCTTGATGATCGTCCCATCCGTGTGGATTTTGAT
TGGGGATTTCAGGATGGCAGGCAATGGGGCCGTGGTCGAAGTGGTGGACAGGTGCGCGATGAATATCGAACAGACTATGATCCTGGTAGAGGTGGCTATGGAAAGTTGGT
TCAGAAAGAGTTGGAAGCACAGAGGCAGCTTGTGGATTATGGTACTGGTTCACTAGGCTCTATGGCACCAGTTATGACTCAGTATGGAAAACATGGTGGAAGCCATGGAC
ATGGGCATCGTCATGGTAGAGATTACCATCATCGTAAGCGCTACCGAGATGATGATCGCCATGCCCATGAAAGCTCTAAAAGAACGTCAGATTACGAGTCTAGAAGAAAC
TCCAATTATGAATCGAGACCGGAGAAGAATCCAAGGTTCCGCGAGAGTGGTGATTCTGATGAAGAGGATGACGATGACCGAAAGCAGCGACACTAA
mRNA sequenceShow/hide mRNA sequence
ATCCCTGTTTATTTTTGCAATTTGCCCTTTCCTATCCCGTTAACCCAAAGTTGAGTTATTATTACGATTTTGCCCATATCGATTTGCCTTCCTCTTACTATTGCTCCAAA
ATCGTCCACCACTCGCCGCGCGCGTCCAGGTCTGAAAGGCTGCCGTTGCCGTTGGTTGACGCTCGACAGAAGCTTGTTGTTTGCCGATTACCTTTTTCTCAGCGTCGAGA
AGAACGCCCAACTCAGCAAGCATCATTGTTGTGTCTCTGGTGCGAATAGAGTCAGTTGAACGAGCTTTCATTTTAACCGCCTCTAATCTCTGCTCCTCTGCTTCTTTCTT
TTTCCCTTCTGTTCTTCGCCTTGAGTAATTAACGTCCCAACTTCCCAACACTTGATATATAGTTGCTCTACCTAAACTGGGTTTCGAGTTTTGGTCCAGATTTTGTTGTT
CTAGGGTTCATGGCTTCGTTGTTCAAGGACCCAACAAAGCTATCTGTTTATCGGGATAGAAGATTTCATGGATCACAAGATGAATTTGAAGTGGCACTTCAGACTTCAAC
CACTGTTTATGTGGGAAATATGTCCTTTTATACGACAGAAGAGCAAGTATATGAGCTTTTTTCTCGAGCTGGAGAAATTAAAAAGATAATCATGGGTTTGGATAAGAATT
CAAAAACGCCTTGTGGCTTTTGTTTTGTCCTATACTATTCTCGGGAGGATACCGAGGATGCTGTTAAATATATAAGTGGAACAATTCTTGATGATCGTCCCATCCGTGTG
GATTTTGATTGGGGATTTCAGGATGGCAGGCAATGGGGCCGTGGTCGAAGTGGTGGACAGGTGCGCGATGAATATCGAACAGACTATGATCCTGGTAGAGGTGGCTATGG
AAAGTTGGTTCAGAAAGAGTTGGAAGCACAGAGGCAGCTTGTGGATTATGGTACTGGTTCACTAGGCTCTATGGCACCAGTTATGACTCAGTATGGAAAACATGGTGGAA
GCCATGGACATGGGCATCGTCATGGTAGAGATTACCATCATCGTAAGCGCTACCGAGATGATGATCGCCATGCCCATGAAAGCTCTAAAAGAACGTCAGATTACGAGTCT
AGAAGAAACTCCAATTATGAATCGAGACCGGAGAAGAATCCAAGGTTCCGCGAGAGTGGTGATTCTGATGAAGAGGATGACGATGACCGAAAGCAGCGACACTAACCCCA
GTGGTGTTTTCATATCAATCATAATGCGAGTAATCATTTACATTGGTGTTTTGTAGTTCAGCAGATCATAAAGGACAATTTCGTTACTTGTAGATGTAAAAACTAACGAG
TTATTTTTTGTTTCATACCACTAGGTACTTTGTGTTTTCTTTAATGAAGGAATGACTAGAAATGGCTGTGTACTGTTTATTTTATAAGAACCAAGTAGGCGTTTTGTCGG
AACTATCATGAGAAAAATGTAGAATTCAATTATCTTCCAAGTACTTTTAA
Protein sequenceShow/hide protein sequence
MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFD
WGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMTQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRN
SNYESRPEKNPRFRESGDSDEEDDDDRKQRH