CuGenDBv2

Gene ID	IVF0013570
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	40S ribosomal protein S26
Genome location	chr03:18297857..18299625
RNA-Seq Expression	IVF0013570
Synteny	IVF0013570
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR000892 - Ribosomal protein S26e IPR038551 - Ribosomal protein S26e superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004138397.1 40S ribosomal protein S26-3 [Cucumis sativus]

1.37e-87

98.45

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRR REPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQNPRVGAGGAPPRA
        FIRRRDDAPKPGQ GQNPRVGAGGAPPRA
Subjt:  FIRRRDDAPKPGQPGQNPRVGAGGAPPRA

XP_008456772.1 PREDICTED: 40S ribosomal protein S26-3-like [Cucumis melo]

1.00e-89

100

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQNPRVGAGGAPPRA
        FIRRRDDAPKPGQPGQNPRVGAGGAPPRA
Subjt:  FIRRRDDAPKPGQPGQNPRVGAGGAPPRA

XP_022134511.1 40S ribosomal protein S26-1-like [Momordica charantia]

8.63e-84

96.83

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRR R+PPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQNPRVGAGGAP
        FIRRRDDAPKPGQPGQ PRVGAG AP
Subjt:  FIRRRDDAPKPGQPGQNPRVGAGGAP

XP_022939944.1 40S ribosomal protein S26-3-like [Cucurbita moschata]

1.12e-84

96.15

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRR R+PPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQNPRVGAG-GAPPRA
        FIRRR+DAPKPGQPGQ PRVGAG GAPPRA
Subjt:  FIRRRDDAPKPGQPGQNPRVGAG-GAPPRA

XP_038884330.1 40S ribosomal protein S26-3-like [Benincasa hispida]

1.67e-88

99.22

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQNPRVGAGGAPPRA
        FIRRRDDAPKPGQPGQ PRVGAGGAPPRA
Subjt:  FIRRRDDAPKPGQPGQNPRVGAGGAPPRA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KDG9 40S ribosomal protein S26

6.9e-66

98.45

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRR REPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQNPRVGAGGAPPRA
        FIRRRDDAPKPGQ GQNPRVGAGGAPPRA
Subjt:  FIRRRDDAPKPGQPGQNPRVGAGGAPPRA

A0A1S3C4P8 40S ribosomal protein S26

1.6e-67

100

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQNPRVGAGGAPPRA
        FIRRRDDAPKPGQPGQNPRVGAGGAPPRA
Subjt:  FIRRRDDAPKPGQPGQNPRVGAGGAPPRA

A0A5A7UA01 40S ribosomal protein S26

1.6e-67

100

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQNPRVGAGGAPPRA
        FIRRRDDAPKPGQPGQNPRVGAGGAPPRA
Subjt:  FIRRRDDAPKPGQPGQNPRVGAGGAPPRA

A0A6J1FIL8 40S ribosomal protein S26

1.1e-63

96.15

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRR R+PPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQNPRVGAG-GAPPRA
        FIRRR+DAPKPGQPGQ PRVGAG GAPPRA
Subjt:  FIRRRDDAPKPGQPGQNPRVGAG-GAPPRA

A0A6J1K0V7 40S ribosomal protein S26

1.1e-63

96.15

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRR R+PPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQNPRVGAG-GAPPRA
        FIRRR+DAPKPGQPGQ PRVGAG GAPPRA
Subjt:  FIRRRDDAPKPGQPGQNPRVGAG-GAPPRA

SwissProt top hits

e value

%identity

Alignment

O45499 40S ribosomal protein S26

1.5e-38

67.8

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRN GRNK  RGHV FIRC+NCG+CCPKDKAIK+F+VRNIVE AAVRD+ +A  Y QY LPKLY K+ YC++CAIHS VVR RSR  RR+R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQNP
        F  +R  A +PG PG  P
Subjt:  FIRRRDDAPKPGQPGQNP

P49206 40S ribosomal protein S26-1

2.2e-53

82.4

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQNPRVGAGGA
        F RR++D PKPGQPGQ PR    GA
Subjt:  FIRRRDDAPKPGQPGQNPRVGAGGA

P49216 40S ribosomal protein S26

1.1e-47

74.02

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVK+IRCSNC KCCPKDKAIKRF VRNIVEQAA+RDVQEACV+D Y LPKLYAK+ +CVSCAIH+H+VRVRSR +RR+R PP+R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQNPRVGAGGAPP
        F RRR+D P+  +PG       G A P
Subjt:  FIRRRDDAPKPGQPGQNPRVGAGGAPP

Q8LPJ7 40S ribosomal protein S26-2

4.9e-53

80.62

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQNPRVGAGGAPPRA
        F RR++D PKPGQPGQ PR    GA   A
Subjt:  FIRRRDDAPKPGQPGQNPRVGAGGAPPRA

Q9LYK9 40S ribosomal protein S26-3

7.6e-54

83.21

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQNPRVGAGGAP--PRA
        F RR++D PKP QPGQ PR  AGGAP  PRA
Subjt:  FIRRRDDAPKPGQPGQNPRVGAGGAP--PRA

Arabidopsis top hits

e value

%identity

Alignment

AT2G40510.1 Ribosomal protein S26e family protein

3.5e-54

80.62

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQNPRVGAGGAPPRA
        F RR++D PKPGQPGQ PR    GA   A
Subjt:  FIRRRDDAPKPGQPGQNPRVGAGGAPPRA

AT2G40590.1 Ribosomal protein S26e family protein

1.6e-54

82.4

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQNPRVGAGGA
        F RR++D PKPGQPGQ PR    GA
Subjt:  FIRRRDDAPKPGQPGQNPRVGAGGA

AT3G56340.1 Ribosomal protein S26e family protein

5.4e-55

83.21

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQNPRVGAGGAP--PRA
        F RR++D PKP QPGQ PR  AGGAP  PRA
Subjt:  FIRRRDDAPKPGQPGQNPRVGAGGAP--PRA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGACTTTCAAGCGCAGGAATGGTGGACGCAACAAGCATGGACGCGGCCACGTGAAATTCATCCGCTGTTCCAACTGCGGCAAATGCTGCCCTAAGGATAAGGCAATCAA
GAGGTTCCTTGTCAGGAACATTGTGGAGCAGGCAGCTGTTAGGGATGTTCAGGAAGCCTGTGTTTATGATCAATACACTCTTCCTAAGCTTTATGCCAAGATGCAGTACT
GTGTTTCTTGTGCTATTCACTCTCACGTTGTGAGGGTTCGATCGCGCACTGACCGGAGGAACCGTGAGCCTCCACAGCGCTTCATTAGACGCAGGGACGATGCACCAAAG
CCTGGACAGCCAGGACAGAACCCTCGTGTTGGAGCTGGTGGAGCTCCACCCCGTGCTTGA

mRNA sequence

Show/hide mRNA sequence

ATTTCATTGGCTAGGTCACCTTCTGTTTCCCCTTCATATAAAAGGATCACTACCACTCATTCATAAACCCTAATTCAGCCGACGAGCTCTCTCATTCTCTCCGGTTCGCT
CCTCCATCTGATACAACTGCAACCATGACTTTCAAGCGCAGGAATGGTGGACGCAACAAGCATGGACGCGGCCACGTGAAATTCATCCGCTGTTCCAACTGCGGCAAATG
CTGCCCTAAGGATAAGGCAATCAAGAGGTTCCTTGTCAGGAACATTGTGGAGCAGGCAGCTGTTAGGGATGTTCAGGAAGCCTGTGTTTATGATCAATACACTCTTCCTA
AGCTTTATGCCAAGATGCAGTACTGTGTTTCTTGTGCTATTCACTCTCACGTTGTGAGGGTTCGATCGCGCACTGACCGGAGGAACCGTGAGCCTCCACAGCGCTTCATT
AGACGCAGGGACGATGCACCAAAGCCTGGACAGCCAGGACAGAACCCTCGTGTTGGAGCTGGTGGAGCTCCACCCCGTGCTTGAAAGAACCCTTTATAAGCTATTTAATT
TTCTCATGGTTTCTCAGATTTTGTGGACTTCATTTTTATTTAGGATTCTTCACTATATTTTGAGGGCTTTGTTTTGAGTATCGAATTATGCTGTACTTCTGAAATCTGAT
CAATTTTTGATTTAACAGGTTCTCTACTTGAATATTTTTATTGTTTTTTGTCATGAGATCTGTTCTATCGATCTTGTTTCATTAATCTCCTTTACTTTTTAGTCAACAAT
TCAG

Protein sequence

Show/hide protein sequence

MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQRFIRRRDDAPK
PGQPGQNPRVGAGGAPPRA

IVF0013570 (gene) of Melon (IVF77) v1 genome