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IVF0013578 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013578
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionMitochondrial intermembrane space import and assembly protein 40
Genome locationchr06:5694110..5694283
RNA-Seq ExpressionIVF0013578
SyntenyIVF0013578
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026022.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]8.80e-0846.88Show/hide
Query:  MLPDTFSGGIGREASSLEGELWCDPNG-------PKDGRSFQRVANARPVSETTGNALAAKETG
        MLPD FSGGIGREA+SLEGELWCDP         P  G       N    + + GN L+++ +G
Subjt:  MLPDTFSGGIGREASSLEGELWCDPNG-------PKDGRSFQRVANARPVSETTGNALAAKETG

KAA0051943.1 hypothetical protein E6C27_scaffold60G004060 [Cucumis melo var. makuwa]7.10e-0756.9Show/hide
Query:  MLPDTFSGGIGREASSLEGELWCDPNGPKDGR-SFQRVANARPVSETTGNALAAKETG
        ++P TFS  IG +ASSLE EL C+P   K     FQRV NAR V ETT NA   KETG
Subjt:  MLPDTFSGGIGREASSLEGELWCDPNGPKDGR-SFQRVANARPVSETTGNALAAKETG

KAA0066117.1 mitochondrial intermembrane space import and assembly protein 40 [Cucumis melo var. makuwa]4.35e-1943.85Show/hide
Query:  MLPDTFSGGIGREASSLEGELWCDP-------------------------------------------------------------------------NG
        MLPDTFSGGIGREASSLEGELWCDP                                                                         NG
Subjt:  MLPDTFSGGIGREASSLEGELWCDP-------------------------------------------------------------------------NG

Query:  PKDGRSFQRVANARPVSETTGNALAAKETG
        PKDGRSFQRVANARPVSETTGNALAAKETG
Subjt:  PKDGRSFQRVANARPVSETTGNALAAKETG

TYK15156.1 mitochondrial intermembrane space import and assembly protein 40 [Cucumis melo var. makuwa]1.84e-11100Show/hide
Query:  NGPKDGRSFQRVANARPVSETTGNALAAKETG
        NGPKDGRSFQRVANARPVSETTGNALAAKETG
Subjt:  NGPKDGRSFQRVANARPVSETTGNALAAKETG

TYK22521.1 uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]7.15e-0748.44Show/hide
Query:  MLPDTFSGGIGREASSLEGELWCDPNG-------PKDGRSFQRVANARPVSETTGNALAAKETG
        MLPDTFSGGIGREASSLEGEL CDP         P  G       N    + + GN L+++ +G
Subjt:  MLPDTFSGGIGREASSLEGELWCDPNG-------PKDGRSFQRVANARPVSETTGNALAAKETG

TrEMBL top hitse value%identityAlignment
A0A5A7SLK2 Retrovirus-related Pol polyprotein from transposon 17.63.9e-0546.88Show/hide
Query:  MLPDTFSGGIGREASSLEGELWCDPNG-------PKDGRSFQRVANARPVSETTGNALAAKETG
        MLPD FSGGIGREA+SLEGELWCDP         P  G       N    + + GN L+++ +G
Subjt:  MLPDTFSGGIGREASSLEGELWCDPNG-------PKDGRSFQRVANARPVSETTGNALAAKETG

A0A5A7U7P6 Uncharacterized protein1.5e-0456.9Show/hide
Query:  MLPDTFSGGIGREASSLEGELWCDPNGPKD-GRSFQRVANARPVSETTGNALAAKETG
        ++P TFS  IG +ASSLE EL C+P   K     FQRV NAR V ETT NA   KETG
Subjt:  MLPDTFSGGIGREASSLEGELWCDPNGPKD-GRSFQRVANARPVSETTGNALAAKETG

A0A5A7VGB1 Mitochondrial intermembrane space import and assembly protein 401.6e-1443.85Show/hide
Query:  MLPDTFSGGIGREASSLEGELWCDP-------------------------------------------------------------------------NG
        MLPDTFSGGIGREASSLEGELWCDP                                                                         NG
Subjt:  MLPDTFSGGIGREASSLEGELWCDP-------------------------------------------------------------------------NG

Query:  PKDGRSFQRVANARPVSETTGNALAAKETG
        PKDGRSFQRVANARPVSETTGNALAAKETG
Subjt:  PKDGRSFQRVANARPVSETTGNALAAKETG

A0A5D3CXI0 Mitochondrial intermembrane space import and assembly protein 406.4e-08100Show/hide
Query:  NGPKDGRSFQRVANARPVSETTGNALAAKETG
        NGPKDGRSFQRVANARPVSETTGNALAAKETG
Subjt:  NGPKDGRSFQRVANARPVSETTGNALAAKETG

A0A5D3DFP2 Uncharacterized protein1.5e-0448.44Show/hide
Query:  MLPDTFSGGIGREASSLEGELWCDPNG-------PKDGRSFQRVANARPVSETTGNALAAKETG
        MLPDTFSGGIGREASSLEGEL CDP         P  G       N    + + GN L+++ +G
Subjt:  MLPDTFSGGIGREASSLEGELWCDPNG-------PKDGRSFQRVANARPVSETTGNALAAKETG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCCTGACACGTTTTCCGGAGGTATAGGTCGGGAAGCGAGCTCGTTGGAGGGAGAACTGTGGTGCGACCCAAACGGTCCAAAAGATGGCCGAAGCTTCCAACGAGT
GGCGAACGCTCGTCCGGTGTCAGAAACCACTGGAAATGCACTTGCAGCGAAGGAAACGGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCCCTGACACGTTTTCCGGAGGTATAGGTCGGGAAGCGAGCTCGTTGGAGGGAGAACTGTGGTGCGACCCAAACGGTCCAAAAGATGGCCGAAGCTTCCAACGAGT
GGCGAACGCTCGTCCGGTGTCAGAAACCACTGGAAATGCACTTGCAGCGAAGGAAACGGGCTGA
Protein sequenceShow/hide protein sequence
MLPDTFSGGIGREASSLEGELWCDPNGPKDGRSFQRVANARPVSETTGNALAAKETG