CuGenDBv2

Gene ID	IVF0013596
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic
Genome location	chr01:28952396..28954795
RNA-Seq Expression	IVF0013596
Synteny	IVF0013596
Gene Ontology terms	GO:0009507 - chloroplast (cellular component)
InterPro domains	IPR003772 - Large ribosomal RNA subunit accumulation protein YceD

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0067976.1 uncharacterized protein E6C27_scaffold138G001640 [Cucumis melo var. makuwa]

1.38e-268

94.85

Show/hide

Query:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSG-----------------TVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFKSKGNV
        MREEKSFHEFSHWIKFFRGASSKFPPFSRTSG                 TVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFKSKGNV
Subjt:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSG-----------------TVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFKSKGNV

Query:  SFNSLLRAPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
        SFNS  R PWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
Subjt:  SFNSLLRAPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS

Query:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
        KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
Subjt:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD

Query:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
        EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
Subjt:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS

TYK18147.1 uncharacterized protein E5676_scaffold411G00780 [Cucumis melo var. makuwa]

2.02e-275

100

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Query:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFKSKGNVSFNSLLRAPWRFMRNIQ
        MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFKSKGNVSFNSLLRAPWRFMRNIQ
Subjt:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFKSKGNVSFNSLLRAPWRFMRNIQ

Query:  PSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKD
        PSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKD
Subjt:  PSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKD

Query:  YPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPP
        YPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPP
Subjt:  YPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPP

Query:  VDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
        VDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
Subjt:  VDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS

XP_004136166.1 large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic [Cucumis sativus]

2.26e-216

92.16

Show/hide

Query:  MLATFPTSSVVSSSHSKEFINVFYFKSKGNVSFNSLLRAPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGA
        MLATFPTSSVVSSSHS EFINVFYFKSKG VSF+S  R PWR +RNIQPSLGDPCIKMKST+IKCVKPTYQSLFEDNSIITDW DQEGDIEEM SPWEGA
Subjt:  MLATFPTSSVVSSSHSKEFINVFYFKSKGNVSFNSLLRAPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGA

Query:  VIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSIL
        +IYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRK+KKLRLDGIVKTVITLNCY CCEPAPECIFSNFSI+
Subjt:  VIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSIL

Query:  LSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAV
        LSEEPIEEPDVINMGIISG+D+FKTDNGNSDEDDEE +DLDDQLYFPP++KEIDISKNIRDILHLEITMNVIC+PGCKG+CLNCGINLNTGSC CSKQAV
Subjt:  LSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAV

Query:  KKNDFGPLGNLKRRMQNNS
        KKNDFGPLG+LKRRMQNNS
Subjt:  KKNDFGPLGNLKRRMQNNS

XP_008451550.1 PREDICTED: uncharacterized protein LOC103492797 isoform X1 [Cucumis melo]

4.60e-267

94.33

Show/hide

Query:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSG-----------------TVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFKSKGNV
        MREEKSFHEFSHWIKFFRGASSKFPPFSRTSG                 TVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYF+SKGNV
Subjt:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSG-----------------TVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFKSKGNV

Query:  SFNSLLRAPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
        SFNS  R PWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEM SPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
Subjt:  SFNSLLRAPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS

Query:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
        KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
Subjt:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD

Query:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
        EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
Subjt:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS

XP_008451552.1 PREDICTED: uncharacterized protein LOC103492797 isoform X2 [Cucumis melo]

1.31e-271

98.65

Show/hide

Query:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFKSKGNVSFNSLLRAPWRFMRNIQ
        MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYF+SKGNVSFNS  R PWRFMRNIQ
Subjt:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFKSKGNVSFNSLLRAPWRFMRNIQ

Query:  PSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKD
        PSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEM SPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKD
Subjt:  PSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKD

Query:  YPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPP
        YPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPP
Subjt:  YPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPP

Query:  VDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
        VDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
Subjt:  VDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KAY7 Uncharacterized protein

1.2e-168

92.16

Show/hide

Query:  MLATFPTSSVVSSSHSKEFINVFYFKSKGNVSFNSLLRAPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGA
        MLATFPTSSVVSSSHS EFINVFYFKSKG VSF+S  R PWR +RNIQPSLGDPCIKMKST+IKCVKPTYQSLFEDNSIITDW DQEGDIEEM SPWEGA
Subjt:  MLATFPTSSVVSSSHSKEFINVFYFKSKGNVSFNSLLRAPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGA

Query:  VIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSIL
        +IYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRK+KKLRLDGIVKTVITLNCY CCEPAPECIFSNFSI+
Subjt:  VIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSIL

Query:  LSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAV
        LSEEPIEEPDVINMGIISG+D+FKTDNGNSDEDDEE +DLDDQLYFPP++KEIDISKNIRDILHLEITMNVIC+PGCKG+CLNCGINLNTGSC CSKQAV
Subjt:  LSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAV

Query:  KKNDFGPLGNLKRRMQNNS
        KKNDFGPLG+LKRRMQNNS
Subjt:  KKNDFGPLGNLKRRMQNNS

A0A1S3BR50 uncharacterized protein LOC103492797 isoform X2

2.6e-211

98.65

Show/hide

Query:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFKSKGNVSFNSLLRAPWRFMRNIQ
        MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYF+SKGNVSFNS  R PWRFMRNIQ
Subjt:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFKSKGNVSFNSLLRAPWRFMRNIQ

Query:  PSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKD
        PSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEM SPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKD
Subjt:  PSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKD

Query:  YPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPP
        YPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPP
Subjt:  YPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPP

Query:  VDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
        VDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
Subjt:  VDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS

A0A1S3BSU8 uncharacterized protein LOC103492797 isoform X1

4.7e-208

94.33

Show/hide

Query:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTS-----------------GTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFKSKGNV
        MREEKSFHEFSHWIKFFRGASSKFPPFSRTS                 GTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYF+SKGNV
Subjt:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTS-----------------GTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFKSKGNV

Query:  SFNSLLRAPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
        SFNS  R PWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEM SPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
Subjt:  SFNSLLRAPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS

Query:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
        KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
Subjt:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD

Query:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
        EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
Subjt:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS

A0A5A7VN29 Uncharacterized protein

3.2e-209

94.85

Show/hide

Query:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTS-----------------GTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFKSKGNV
        MREEKSFHEFSHWIKFFRGASSKFPPFSRTS                 GTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFKSKGNV
Subjt:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTS-----------------GTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFKSKGNV

Query:  SFNSLLRAPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
        SFNS  R PWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
Subjt:  SFNSLLRAPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS

Query:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
        KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
Subjt:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD

Query:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
        EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
Subjt:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS

A0A5D3D2J4 Uncharacterized protein

3.3e-214

100

Show/hide

Query:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFKSKGNVSFNSLLRAPWRFMRNIQ
        MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFKSKGNVSFNSLLRAPWRFMRNIQ
Subjt:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFKSKGNVSFNSLLRAPWRFMRNIQ

Query:  PSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKD
        PSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKD
Subjt:  PSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKD

Query:  YPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPP
        YPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPP
Subjt:  YPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPP

Query:  VDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
        VDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
Subjt:  VDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS

SwissProt top hits

e value

%identity

Alignment

A0A1D6HQ92 Large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic

1.8e-55

54.21

Show/hide

Query:  SPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLR-VTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECI
        SPWEGAV+Y+R+++V H+EY +TLERLGL  LS+  S++RA+ +GL   T D       TPV +SVDVTR+  +LRLDGIV+TVITL C+RC EPAP+ I
Subjt:  SPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLR-VTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECI

Query:  FSNFSILLSEEPI-EEPDVINMGIISGQDIFKTDNGNSD----EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINL
        F+NFS+LL+E+P+ EEPD   +G I  +D    D G +      D ++ +D DD+L+FP  DKEIDISK+IRD++HLEIT++ +CNP CKG+CL CG NL
Subjt:  FSNFSILLSEEPI-EEPDVINMGIISGQDIFKTDNGNSD----EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINL

Query:  N-TGSCNCSKQAVK
        N T SC C  + V+
Subjt:  N-TGSCNCSKQAVK

Q9LT27 Large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic

5.3e-84

60.54

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Query:  IKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPV
        IK+   +   +  + +S  E ++I  DW DQE +IE+ GSPWEG+V+Y+RN+SV+HVEYCTTLERLGL +LSTDVSK RAS MGLRVTKDVKDYP GTPV
Subjt:  IKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPV

Query:  QISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDI
        Q+SVDV RK KKLRLDGIV+TVITL C RC E   E IFSNFS+LL+EEP+EEPDVI++G   G D  K +  + D++D+  +D +D+L+FPP  KEIDI
Subjt:  QISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDI

Query:  SKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQ
        SK+IRD++HLEIT+  IC+  CKGMCL CG NLN   C+C ++  K   +GPLGNL+ +MQ
Subjt:  SKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQ

Arabidopsis top hits

e value

%identity

Alignment

AT3G19810.1 Protein of unknown function (DUF177)

3.8e-85

60.54

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Query:  IKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPV
        IK+   +   +  + +S  E ++I  DW DQE +IE+ GSPWEG+V+Y+RN+SV+HVEYCTTLERLGL +LSTDVSK RAS MGLRVTKDVKDYP GTPV
Subjt:  IKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPV

Query:  QISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDI
        Q+SVDV RK KKLRLDGIV+TVITL C RC E   E IFSNFS+LL+EEP+EEPDVI++G   G D  K +  + D++D+  +D +D+L+FPP  KEIDI
Subjt:  QISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDI

Query:  SKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQ
        SK+IRD++HLEIT+  IC+  CKGMCL CG NLN   C+C ++  K   +GPLGNL+ +MQ
Subjt:  SKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQ

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGAGAGGAAAAGTCCTTCCATGAGTTCAGCCACTGGATAAAATTTTTCCGCGGAGCGTCATCGAAATTCCCACCATTTTCAAGAACCTCAGGGACTGTGTTATTTGT
ATCTACGGAAATTCCTTTACCCACTTTCTGTCCCCATTCGTTTAAGATGCTAGCCACATTTCCCACATCATCCGTAGTTTCATCTTCTCATTCCAAGGAATTTATTAATG
TATTCTACTTCAAATCTAAAGGGAATGTTTCTTTTAATTCACTTTTGCGAGCTCCATGGAGATTTATGAGAAATATTCAGCCAAGCTTGGGTGACCCATGTATTAAGATG
AAATCTACTTCCATTAAGTGTGTGAAACCTACGTATCAATCCCTTTTTGAGGACAATTCCATTATTACTGATTGGGGAGATCAAGAAGGGGATATTGAGGAGATGGGCTC
ACCTTGGGAAGGAGCAGTTATCTACAAGAGGAACTCTTCAGTTTCTCATGTGGAGTATTGCACAACATTAGAGAGGCTTGGGTTAGAGAAGCTTTCGACTGATGTCTCGA
AATCTAGAGCATCGACGATGGGTCTACGCGTAACGAAGGATGTGAAAGATTATCCCTTTGGAACACCTGTTCAAATCTCTGTTGATGTCACAAGGAAAGATAAAAAGTTG
AGGCTGGACGGAATAGTTAAAACTGTCATCACCCTGAATTGTTATAGGTGTTGTGAACCTGCTCCTGAATGCATTTTCTCAAATTTCTCCATTTTACTAAGCGAAGAACC
AATTGAAGAACCTGATGTCATAAATATGGGAATCATTAGCGGGCAGGATATATTCAAGACTGATAATGGAAATAGTGACGAAGATGATGAAGAGTCGGTAGATTTGGATG
ATCAACTCTATTTTCCTCCTGTGGACAAAGAGATAGATATATCAAAGAACATCAGAGACATCTTGCATCTAGAAATTACTATGAATGTGATATGTAATCCGGGATGCAAA
GGTATGTGTCTAAATTGTGGTATAAATTTGAATACTGGAAGCTGTAACTGTAGTAAGCAGGCTGTAAAGAAGAATGATTTTGGTCCTCTTGGAAATTTGAAAAGACGAAT
GCAGAACAATTCTTAA

mRNA sequence

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ATTTAGAGTAAAACTTAGTTAGAGGATTAAGTTTGCAATTATTTCTTTAAAGTTTAAGATTAAAATTACAAAAGGCTTATCACAAAATTTGAGATGTAATTTACCTTAAA
TCTTCGATTTATCAAAACAATTTTAATTGATGAAGATAAATTTGACAATTACGTACTATTTTCCATTACCCATTGATTAAAAACTTTATGCGAGAGGAAAAGTCCTTCCA
TGAGTTCAGCCACTGGATAAAATTTTTCCGCGGAGCGTCATCGAAATTCCCACCATTTTCAAGAACCTCAGGGACTGTGTTATTTGTATCTACGGAAATTCCTTTACCCA
CTTTCTGTCCCCATTCGTTTAAGATGCTAGCCACATTTCCCACATCATCCGTAGTTTCATCTTCTCATTCCAAGGAATTTATTAATGTATTCTACTTCAAATCTAAAGGG
AATGTTTCTTTTAATTCACTTTTGCGAGCTCCATGGAGATTTATGAGAAATATTCAGCCAAGCTTGGGTGACCCATGTATTAAGATGAAATCTACTTCCATTAAGTGTGT
GAAACCTACGTATCAATCCCTTTTTGAGGACAATTCCATTATTACTGATTGGGGAGATCAAGAAGGGGATATTGAGGAGATGGGCTCACCTTGGGAAGGAGCAGTTATCT
ACAAGAGGAACTCTTCAGTTTCTCATGTGGAGTATTGCACAACATTAGAGAGGCTTGGGTTAGAGAAGCTTTCGACTGATGTCTCGAAATCTAGAGCATCGACGATGGGT
CTACGCGTAACGAAGGATGTGAAAGATTATCCCTTTGGAACACCTGTTCAAATCTCTGTTGATGTCACAAGGAAAGATAAAAAGTTGAGGCTGGACGGAATAGTTAAAAC
TGTCATCACCCTGAATTGTTATAGGTGTTGTGAACCTGCTCCTGAATGCATTTTCTCAAATTTCTCCATTTTACTAAGCGAAGAACCAATTGAAGAACCTGATGTCATAA
ATATGGGAATCATTAGCGGGCAGGATATATTCAAGACTGATAATGGAAATAGTGACGAAGATGATGAAGAGTCGGTAGATTTGGATGATCAACTCTATTTTCCTCCTGTG
GACAAAGAGATAGATATATCAAAGAACATCAGAGACATCTTGCATCTAGAAATTACTATGAATGTGATATGTAATCCGGGATGCAAAGGTATGTGTCTAAATTGTGGTAT
AAATTTGAATACTGGAAGCTGTAACTGTAGTAAGCAGGCTGTAAAGAAGAATGATTTTGGTCCTCTTGGAAATTTGAAAAGACGAATGCAGAACAATTCTTAAGACTTGA
ATGCAAGACCATGTGTTCCTTTTAAT

Protein sequence

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MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFKSKGNVSFNSLLRAPWRFMRNIQPSLGDPCIKM
KSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKL
RLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCK
GMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS

IVF0013596 (gene) of Melon (IVF77) v1 genome