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IVF0013628 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013628
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr12:1835540..1835758
RNA-Seq ExpressionIVF0013628
SyntenyIVF0013628
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006413 - translational initiation (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041960.1 reverse transcriptase [Cucumis melo var. makuwa]3.38e-3487.5Show/hide
Query:  MTIPLNLSKNSGETVPKEILYALEKYRDVMSDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYCMAPPELAEL
        M IPLN S+NSGETVPKEI+  LEKY DVM DSLPKSLPPRRMIDHEIELVPGAKPPAKNAY MAPPELAEL
Subjt:  MTIPLNLSKNSGETVPKEILYALEKYRDVMSDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYCMAPPELAEL

KAA0057280.1 uncharacterized protein E6C27_scaffold280G001210 [Cucumis melo var. makuwa]3.56e-3591.67Show/hide
Query:  MTIPLNLSKNSGETVPKEILYALEKYRDVMSDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYCMAPPELAEL
        M IPLNLS+NSGETVPKEI+  LEKYRDVM DSLPKSLPPRRMIDHEIELVPGAKPPAKNAYCMAPPELAEL
Subjt:  MTIPLNLSKNSGETVPKEILYALEKYRDVMSDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYCMAPPELAEL

KAA0061351.1 uncharacterized protein E6C27_scaffold749G00340 [Cucumis melo var. makuwa]7.35e-3487.5Show/hide
Query:  MTIPLNLSKNSGETVPKEILYALEKYRDVMSDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYCMAPPELAEL
        M IPLN S+N GETVPKEI++ LEKYRDVM DSLPKSLPPRRMIDHEIELVPGAKPPAKNAY MAPPELAEL
Subjt:  MTIPLNLSKNSGETVPKEILYALEKYRDVMSDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYCMAPPELAEL

KAA0067732.1 uncharacterized protein E6C27_scaffold352G00510 [Cucumis melo var. makuwa]1.93e-3694.44Show/hide
Query:  MTIPLNLSKNSGETVPKEILYALEKYRDVMSDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYCMAPPELAEL
        MTIPLNLSKN GETVPKEIL ALEKYRDVMSDSLPK LPPRRMIDHEIELVPGAKPPAKNAYCM PPELAEL
Subjt:  MTIPLNLSKNSGETVPKEILYALEKYRDVMSDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYCMAPPELAEL

TYJ97411.1 uncharacterized protein E5676_scaffold194G002320 [Cucumis melo var. makuwa]1.02e-3496.97Show/hide
Query:  MTIPLNLSKNSGETVPKEILYALEKYRDVMSDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYCMAP
        MTIPLNLSKNSGETVPKEILYALEKYRDVMSDSLPKSLPPRRMIDHEIELVPGAKPPAKNAY  AP
Subjt:  MTIPLNLSKNSGETVPKEILYALEKYRDVMSDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYCMAP

TrEMBL top hitse value%identityAlignment
A0A5A7UQ94 Uncharacterized protein3.7e-2991.67Show/hide
Query:  MTIPLNLSKNSGETVPKEILYALEKYRDVMSDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYCMAPPELAEL
        M IPLNLS+NSGETVPKEI+  LEKYRDVM DSLPKSLPPRRMIDHEIELVPGAKPPAKNAYCMAPPELAEL
Subjt:  MTIPLNLSKNSGETVPKEILYALEKYRDVMSDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYCMAPPELAEL

A0A5A7VBR9 Polyprotein7.1e-2888.89Show/hide
Query:  MTIPLNLSKNSGETVPKEILYALEKYRDVMSDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYCMAPPELAEL
        M IPLN S+NSGETV KEI+  LEKYRDVMSDSLPKSLPPR+MIDHEIELVPGAKPPAKNAYCMAPPELAEL
Subjt:  MTIPLNLSKNSGETVPKEILYALEKYRDVMSDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYCMAPPELAEL

A0A5A7VH85 Reverse transcriptase9.9e-3094.44Show/hide
Query:  MTIPLNLSKNSGETVPKEILYALEKYRDVMSDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYCMAPPELAEL
        MTIPLNLSKN GETVPKEIL ALEKYRDVMSDSLPK LPPRRMIDHEIELVPGAKPPAKNAYCM PPELAEL
Subjt:  MTIPLNLSKNSGETVPKEILYALEKYRDVMSDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYCMAPPELAEL

A0A5D3B9T5 Reverse transcriptase domain-containing protein4.6e-2788.89Show/hide
Query:  MTIPLNLSKNSGETVPKEILYALEKYRDVMSDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYCMAPPELAEL
        M IPLN S+NSGETVPKEI+  LEKYRDVM DSLPKSLPPRRMIDHEIELVPGAKPPAKNAY MAPPELAEL
Subjt:  MTIPLNLSKNSGETVPKEILYALEKYRDVMSDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYCMAPPELAEL

A0A5D3BFL0 Reverse transcriptase domain-containing protein2.1e-2796.97Show/hide
Query:  MTIPLNLSKNSGETVPKEILYALEKYRDVMSDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYCMAP
        MTIPLNLSKNSGETVPKEILYALEKYRDVMSDSLPKSLPPRRMIDHEIELVPGAKPPAKNAY  AP
Subjt:  MTIPLNLSKNSGETVPKEILYALEKYRDVMSDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYCMAP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCATCCCACTCAATTTGTCGAAGAACTCAGGGGAGACAGTCCCTAAGGAGATTCTGTACGCGTTAGAGAAGTATCGTGATGTGATGTCCGACAGTTTGCCCAAGTC
TTTGCCACCTCGAAGAATGATTGATCATGAGATCGAGTTAGTGCCAGGGGCAAAACCGCCTGCGAAGAACGCTTATTGTATGGCGCCTCCAGAGTTAGCTGAACTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACCATCCCACTCAATTTGTCGAAGAACTCAGGGGAGACAGTCCCTAAGGAGATTCTGTACGCGTTAGAGAAGTATCGTGATGTGATGTCCGACAGTTTGCCCAAGTC
TTTGCCACCTCGAAGAATGATTGATCATGAGATCGAGTTAGTGCCAGGGGCAAAACCGCCTGCGAAGAACGCTTATTGTATGGCGCCTCCAGAGTTAGCTGAACTTTAG
Protein sequenceShow/hide protein sequence
MTIPLNLSKNSGETVPKEILYALEKYRDVMSDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYCMAPPELAEL