; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0013636 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013636
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr09:5709348..5709626
RNA-Seq ExpressionIVF0013636
SyntenyIVF0013636
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042479.1 retrotransposon protein [Cucumis melo var. makuwa]1.25e-0558Show/hide
Query:  MKSAKENTTEFTISLLTNTGSGGCKEKWLAV-----DWCMQLKKTENRLG
        MKS KEN+ EFTIS L NTGS GCKE+WL           +LKK EN LG
Subjt:  MKSAKENTTEFTISLLTNTGSGGCKEKWLAV-----DWCMQLKKTENRLG
TYK22897.1 retrotransposon protein [Cucumis melo var. makuwa]1.21e-0558Show/hide
Query:  MKSAKENTTEFTISLLTNTGSGGCKEKWLAV-----DWCMQLKKTENRLG
        MKS KEN+ EFTIS L NTGS GCKE+WL           +LKK EN LG
Subjt:  MKSAKENTTEFTISLLTNTGSGGCKEKWLAV-----DWCMQLKKTENRLG
TrEMBL top hitse value%identityAlignment
A0A5A7TM86 Retrotransposon protein7.0e-0458Show/hide
Query:  MKSAKENTTEFTISLLTNTGSGGCKEKWLAV-----DWCMQLKKTENRLG
        MKS KEN+ EFTIS L NTGS GCKE+WL           +LKK EN LG
Subjt:  MKSAKENTTEFTISLLTNTGSGGCKEKWLAV-----DWCMQLKKTENRLG
A0A5D3DGS4 Retrotransposon protein7.0e-0458Show/hide
Query:  MKSAKENTTEFTISLLTNTGSGGCKEKWLAV-----DWCMQLKKTENRLG
        MKS KEN+ EFTIS L NTGS GCKE+WL           +LKK EN LG
Subjt:  MKSAKENTTEFTISLLTNTGSGGCKEKWLAV-----DWCMQLKKTENRLG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCGGCCAAGGAAAACACAACAGAATTCACAATTTCTCTCTTAACAAACACTGGCTCAGGTGGCTGCAAGGAGAAGTGGCTTGCGGTGGATTGGTGCATGCAGTT
GAAGAAGACAGAAAATCGGCTCGGGTCAGGTACACGGCTCGAAGAAGAGCGGCGGCGTGGCTGGGTTTCATCGGATGACACGCGAGAAAGGCCAATGATGCAATTGATGG
GCTTCAACGACAAGACAAGGGCGACAGAGAAGAAAATGAAGCTGCAGCAGGTGACATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCGGCCAAGGAAAACACAACAGAATTCACAATTTCTCTCTTAACAAACACTGGCTCAGGTGGCTGCAAGGAGAAGTGGCTTGCGGTGGATTGGTGCATGCAGTT
GAAGAAGACAGAAAATCGGCTCGGGTCAGGTACACGGCTCGAAGAAGAGCGGCGGCGTGGCTGGGTTTCATCGGATGACACGCGAGAAAGGCCAATGATGCAATTGATGG
GCTTCAACGACAAGACAAGGGCGACAGAGAAGAAAATGAAGCTGCAGCAGGTGACATGA
Protein sequenceShow/hide protein sequence
MKSAKENTTEFTISLLTNTGSGGCKEKWLAVDWCMQLKKTENRLGSGTRLEEERRRGWVSSDDTRERPMMQLMGFNDKTRATEKKMKLQQVT