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IVF0013654 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013654
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLate embryogenesis abundant protein 1
Genome locationchr01:31297371..31298166
RNA-Seq ExpressionIVF0013654
SyntenyIVF0013654
Gene Ontology termsNA
InterPro domainsIPR039624 - Stress-induced protein KIN1/KIN2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058773.1 late embryogenesis abundant protein 1 [Cucumis melo var. makuwa]5.61e-64100Show/hide
Query:  MASHQDNLSHKAGETVGQAQVKKDEMMNQPTAHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNSNNPTNNPTTNPSNN
        MASHQDNLSHKAGETVGQAQVKKDEMMNQPTAHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNSNNPTNNPTTNPSNN
Subjt:  MASHQDNLSHKAGETVGQAQVKKDEMMNQPTAHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNSNNPTNNPTTNPSNN

Query:  PTNNPSTRI
        PTNNPSTRI
Subjt:  PTNNPSTRI

KAG6575581.1 hypothetical protein SDJN03_26220, partial [Cucurbita argyrosperma subsp. sororia]1.19e-3169.37Show/hide
Query:  MASHQDNLSHKAGETVGQAQVKKDEMMNQPTAHD--QSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNSNNPTNNPTTNPS
        MAS QD LS KAGETVGQAQVKKDE+M+Q T+    QSA QTA+DLKDQAA+FLQQTGEQVK+MAQGAAEAVKNTLGM TD  +           TT+P+
Subjt:  MASHQDNLSHKAGETVGQAQVKKDEMMNQPTAHD--QSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNSNNPTNNPTTNPS

Query:  NNPTNNPSTRI
        NNPTNNPS  I
Subjt:  NNPTNNPSTRI

XP_004136082.1 late embryogenesis abundant protein 2 [Cucumis sativus]1.87e-4476.23Show/hide
Query:  MASHQDNLSHKAGETVGQAQVKKDEMMNQPTAHDQS-ATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNS------------N
        MASHQD LSHKA E VGQAQVK+DEMMNQPT  DQS A QTA+DLKDQAA+FLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSN N+            N
Subjt:  MASHQDNLSHKAGETVGQAQVKKDEMMNQPTAHDQS-ATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNS------------N

Query:  NPTNNPTTNPSNNPTNNPSTRI
        NP NNPT+NP++NPT+NPSTRI
Subjt:  NPTNNPTTNPSNNPTNNPSTRI

XP_008461082.1 PREDICTED: late embryogenesis abundant protein 1 [Cucumis melo]5.72e-6193.16Show/hide
Query:  MASHQDNLSHKAGETVGQAQVKKDEMMNQPTAHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNSNNPTNNPTTNPSNN
        MASHQDNLSHKAGETVGQAQVKKDEMMNQPTAHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNSNNPTNNPTTNPSNN
Subjt:  MASHQDNLSHKAGETVGQAQVKKDEMMNQPTAHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNSNNPTNNPTTNPSNN

Query:  PT--------NNPSTRI
        PT        NNPSTRI
Subjt:  PT--------NNPSTRI

XP_038899752.1 late embryogenesis abundant protein 2-like [Benincasa hispida]2.77e-3975.23Show/hide
Query:  MASHQDNLSHKAGETVGQAQVKKDEMMNQPT-----------AHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNSNNP
        MASHQD +SHKAGE VGQAQVKKDE++NQ +            HDQS  QTAS+LKDQAANFLQQTGEQVKNMAQGAA+AVKNTLGMNTDNT  PN+NNP
Subjt:  MASHQDNLSHKAGETVGQAQVKKDEMMNQPT-----------AHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNSNNP

Query:  TNNPTTNPS
        TNNPT NPS
Subjt:  TNNPTTNPS

TrEMBL top hitse value%identityAlignment
A0A0A0K8V2 Uncharacterized protein6.5e-3376.23Show/hide
Query:  MASHQDNLSHKAGETVGQAQVKKDEMMNQPTAHDQ-SATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPN------------SN
        MASHQD LSHKA E VGQAQVK+DEMMNQPT  DQ SA QTA+DLKDQAA+FLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSN N            +N
Subjt:  MASHQDNLSHKAGETVGQAQVKKDEMMNQPTAHDQ-SATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPN------------SN

Query:  NPTNNPTTNPSNNPTNNPSTRI
        NP NNPT+NP++NPT+NPSTRI
Subjt:  NPTNNPTTNPSNNPTNNPSTRI

A0A1S3CF46 late embryogenesis abundant protein 11.9e-4593.16Show/hide
Query:  MASHQDNLSHKAGETVGQAQVKKDEMMNQPTAHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNSNNPT--------NN
        MASHQDNLSHKAGETVGQAQVKKDEMMNQPTAHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNSNNPT        NN
Subjt:  MASHQDNLSHKAGETVGQAQVKKDEMMNQPTAHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNSNNPT--------NN

Query:  PTTNPSNNPTNNPSTRI
        PTTNPSNNPTNNPSTRI
Subjt:  PTTNPSNNPTNNPSTRI

A0A5D3CF20 Late embryogenesis abundant protein 11.2e-47100Show/hide
Query:  MASHQDNLSHKAGETVGQAQVKKDEMMNQPTAHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNSNNPTNNPTTNPSNN
        MASHQDNLSHKAGETVGQAQVKKDEMMNQPTAHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNSNNPTNNPTTNPSNN
Subjt:  MASHQDNLSHKAGETVGQAQVKKDEMMNQPTAHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNSNNPTNNPTTNPSNN

Query:  PTNNPSTRI
        PTNNPSTRI
Subjt:  PTNNPSTRI

A0A6J1HHY8 late embryogenesis abundant protein 11.8e-2267.89Show/hide
Query:  MASHQDNLSHKAGETVGQAQVKKDEMMNQ-------------PTAHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSN--PN
        MAS QD +SH  GE VGQAQVKKDE++NQ              T    SA QTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTD++SN   N
Subjt:  MASHQDNLSHKAGETVGQAQVKKDEMMNQ-------------PTAHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSN--PN

Query:  SNNPTNNPT
        +NNPTN P+
Subjt:  SNNPTNNPT

A0A6J1KJU5 late embryogenesis abundant protein 16.1e-2368.81Show/hide
Query:  MASHQDNLSHKAGETVGQAQVKKDEMMNQ-------------PTAHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSN--PN
        MAS QD +SH  GE VGQAQVKKDE+MNQ              T    SA QTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTD++SN   N
Subjt:  MASHQDNLSHKAGETVGQAQVKKDEMMNQ-------------PTAHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSN--PN

Query:  SNNPTNNPT
        +NNPTN P+
Subjt:  SNNPTNNPT

SwissProt top hitse value%identityAlignment
O49816 Late embryogenesis abundant protein 16.5e-0648.15Show/hide
Query:  KAGETVGQAQVKKDEMMNQPTAHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNSNNPTN
        KA +T G+A+ K  EM        QS  +TA   KD +A FLQQTGE+VK MAQGA +AVK T GM  D+      + PTN
Subjt:  KAGETVGQAQVKKDEMMNQPTAHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNSNNPTN

O49817 Late embryogenesis abundant protein 21.1e-0546.91Show/hide
Query:  KAGETVGQAQVKKDEMMNQPTAHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNSNNPTN
        KA +T G+A+ K  EM        QS  +TA   KD +A FLQQTGE+ K MAQGA +AVK T GM  D+      + PTN
Subjt:  KAGETVGQAQVKKDEMMNQPTAHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNSNNPTN

Arabidopsis top hitse value%identityAlignment
AT1G15415.1 The protein encoded by this gene was identified as a part of pollen proteome by mass spec analysis. It has weak homology to LEA (late embryo abundant) proteins. Encodes protein phosphatase 2A (PP2A) B'gamma subunit. Targeted to nucleus and cytosol.1.3e-0640.78Show/hide
Query:  MASHQD-NLSHKAGETVGQAQVKKDEMMNQPTAHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNSNNPTNNPTTNPSN
        MAS QD   S +AG+ VGQA VK+++  N                  QA+ FLQQ GE+VK+MA  A+EAVKN LG+N DN     + NP +    N + 
Subjt:  MASHQD-NLSHKAGETVGQAQVKKDEMMNQPTAHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNSNNPTNNPTTNPSN

Query:  NPT
        +P+
Subjt:  NPT

AT1G52680.1 late embryogenesis abundant protein-related / LEA protein-related3.4e-1043.86Show/hide
Query:  SHQDNLSHKAGETVGQAQVKKDEMMNQPT----------AHDQSATQTASD-----LKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNSN
        S    LSH AGE  GQ Q+KK+E +N  +           H QS   +  D     L  QA++ +QQTG QVKNMAQGAA+AVKNTLGM      +P +N
Subjt:  SHQDNLSHKAGETVGQAQVKKDEMMNQPT----------AHDQSATQTASD-----LKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNSN

Query:  NPTNNPTTNPSNNP
        +P++   T  SN P
Subjt:  NPTNNPTTNPSNNP

AT3G02480.1 Late embryogenesis abundant protein (LEA) family protein2.5e-0539.19Show/hide
Query:  HQDNLSHKAGETVGQAQVKKDEMMNQPTAHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMN
        ++ N S++AG+  GQ + K   MM++           A D    A + LQQTG+Q+K  AQGAA+ VK+  GMN
Subjt:  HQDNLSHKAGETVGQAQVKKDEMMNQPTAHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMN

AT4G13560.1 Late embryogenesis abundant protein (LEA) family protein8.7e-0659.52Show/hide
Query:  SATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMN
        SA ++A   ++QAA    QTGE VKNMAQGA + VKN+LGMN
Subjt:  SATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMN

AT5G38760.1 Late embryogenesis abundant protein (LEA) family protein7.9e-0740.26Show/hide
Query:  MASHQDNLSHKAGETVGQAQVKKDEMMNQPTAHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMN
        M+S+  N+S +AG+  GQ Q K   MM++ +   QSA ++           L++TG+Q+K  AQGA E+VKN  GMN
Subjt:  MASHQDNLSHKAGETVGQAQVKKDEMMNQPTAHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGCCATCAGGATAATCTTAGCCACAAGGCTGGTGAGACCGTTGGCCAAGCTCAGGTAAAGAAAGATGAGATGATGAACCAACCCACTGCTCACGACCAATCTGC
TACCCAAACTGCGTCTGATCTCAAGGACCAAGCTGCAAATTTCCTTCAACAGACTGGAGAGCAAGTGAAGAACATGGCTCAAGGAGCCGCTGAGGCAGTGAAGAACACAC
TTGGGATGAACACTGATAACACTTCAAACCCCAACAGCAACAATCCAACCAACAACCCTACCACCAATCCATCCAACAACCCTACCAACAATCCATCCACTAGAATTTAA
mRNA sequenceShow/hide mRNA sequence
ACTTAATCTTCATATTTCACTATATATTTCTCTTCTTTCAATTTCAAGAAACAAAAAATACTATTCAGAAAATGGCAAGCCATCAGGATAATCTTAGCCACAAGGCTGGT
GAGACCGTTGGCCAAGCTCAGGTAAAGAAAGATGAGATGATGAACCAACCCACTGCTCACGACCAATCTGCTACCCAAACTGCGTCTGATCTCAAGGACCAAGCTGCAAA
TTTCCTTCAACAGACTGGAGAGCAAGTGAAGAACATGGCTCAAGGAGCCGCTGAGGCAGTGAAGAACACACTTGGGATGAACACTGATAACACTTCAAACCCCAACAGCA
ACAATCCAACCAACAACCCTACCACCAATCCATCCAACAACCCTACCAACAATCCATCCACTAGAATTTAAAAACATGAAGCATTAACTTACTTCATTTTTTTTTCTTTC
CTTTTTGGTTTTTTTTTTTAAATTAAATTTTCTTTTTTTCATTATGAGCAAATGAAAAGAGTGAACTTAATGGTTTTTTATGTATAAATAAATTGGAAGGAAGAGTGTGA
TGTATGGATCCCCTTCCTTTTCTTAATTAAATTTAATTTCTAGTCTTTTTGCCCTATTCTCTCATGTG
Protein sequenceShow/hide protein sequence
MASHQDNLSHKAGETVGQAQVKKDEMMNQPTAHDQSATQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNSNNPTNNPTTNPSNNPTNNPSTRI