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IVF0013665 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013665
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRING-H2 finger protein ATL18-like
Genome locationchr11:14061695..14062143
RNA-Seq ExpressionIVF0013665
SyntenyIVF0013665
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047798.1 RING-H2 finger protein ATL18-like [Cucumis melo var. makuwa]5.54e-10699.31Show/hide
Query:  MLGLFYLVSPMRFPILFFSTFLWIPLFRMKQAILGVVATVFGRPSSPQHGTDLVVVRSYDEDHGGSSEEICSICLTEFGRSEDSVCKLPNCEHLFHFNCI
        MLGLFYLVSPMRFPILFFSTFLWIPLFRMKQAILGVVATVFG PSSPQHGTDLVVVRSYDEDHGGSSEEICSICLTEFGRSEDSVCKLPNCEHLFHFNCI
Subjt:  MLGLFYLVSPMRFPILFFSTFLWIPLFRMKQAILGVVATVFGRPSSPQHGTDLVVVRSYDEDHGGSSEEICSICLTEFGRSEDSVCKLPNCEHLFHFNCI

Query:  QEWIDRNRFTCPLCRCFFLEDNHKMDTKWRFLVPDNPSSLYYFLQ
        QEWIDRNRFTCPLCRCFFLEDNHKMDTKWRFLVPDNPSSLYYFLQ
Subjt:  QEWIDRNRFTCPLCRCFFLEDNHKMDTKWRFLVPDNPSSLYYFLQ

KAG7010790.1 RING-H2 finger protein ATL18, partial [Cucurbita argyrosperma subsp. argyrosperma]1.12e-5158.55Show/hide
Query:  MLGLFYLVSPMRFPILFFSTFLWIPLFRMKQAILGVVATVFGRPSSPQHGTD---LVVVRSYDE----DHGGSSEEICSICLTEFGRSEDSVCKLPNCEH
        MLGL +L S +   I+FF+TF+WIPLFR+K+AILG +A+VF   S P+  +     ++VR Y+E    D     EE+CSICLTEF R EDSVCKLP+C H
Subjt:  MLGLFYLVSPMRFPILFFSTFLWIPLFRMKQAILGVVATVFGRPSSPQHGTD---LVVVRSYDE----DHGGSSEEICSICLTEFGRSEDSVCKLPNCEH

Query:  LFHFNCIQEWIDRNRFTCPLCRCFFLEDNHKMDTKWRFLVPDNPSSLYYFLQ
        +FHF+CI++W +RNRFTCPLCRCFF  + H  + K RF+VPDNPSSLYYFLQ
Subjt:  LFHFNCIQEWIDRNRFTCPLCRCFFLEDNHKMDTKWRFLVPDNPSSLYYFLQ

TYK01060.1 RING-H2 finger protein ATL18-like [Cucumis melo var. makuwa]4.73e-107100Show/hide
Query:  MLGLFYLVSPMRFPILFFSTFLWIPLFRMKQAILGVVATVFGRPSSPQHGTDLVVVRSYDEDHGGSSEEICSICLTEFGRSEDSVCKLPNCEHLFHFNCI
        MLGLFYLVSPMRFPILFFSTFLWIPLFRMKQAILGVVATVFGRPSSPQHGTDLVVVRSYDEDHGGSSEEICSICLTEFGRSEDSVCKLPNCEHLFHFNCI
Subjt:  MLGLFYLVSPMRFPILFFSTFLWIPLFRMKQAILGVVATVFGRPSSPQHGTDLVVVRSYDEDHGGSSEEICSICLTEFGRSEDSVCKLPNCEHLFHFNCI

Query:  QEWIDRNRFTCPLCRCFFLEDNHKMDTKWRFLVPDNPSSLYYFLQ
        QEWIDRNRFTCPLCRCFFLEDNHKMDTKWRFLVPDNPSSLYYFLQ
Subjt:  QEWIDRNRFTCPLCRCFFLEDNHKMDTKWRFLVPDNPSSLYYFLQ

XP_022944066.1 RING-H2 finger protein ATL18-like [Cucurbita moschata]5.57e-5259.21Show/hide
Query:  MLGLFYLVSPMRFPILFFSTFLWIPLFRMKQAILGVVATVFGRPSSPQHGTD---LVVVRSYDE----DHGGSSEEICSICLTEFGRSEDSVCKLPNCEH
        MLGL +L S +   I+FF+TF+WIPLFR+K+AILG VA+VF   S P+  +     ++VR Y+E    D     EE+CSICLTEF R EDSVCKLP+C H
Subjt:  MLGLFYLVSPMRFPILFFSTFLWIPLFRMKQAILGVVATVFGRPSSPQHGTD---LVVVRSYDE----DHGGSSEEICSICLTEFGRSEDSVCKLPNCEH

Query:  LFHFNCIQEWIDRNRFTCPLCRCFFLEDNHKMDTKWRFLVPDNPSSLYYFLQ
        +FHF+CI++W +RNRFTCPLCRCFF  + H  + K RF+VPDNPSSLYYFLQ
Subjt:  LFHFNCIQEWIDRNRFTCPLCRCFFLEDNHKMDTKWRFLVPDNPSSLYYFLQ

XP_023512248.1 RING-H2 finger protein ATL18-like [Cucurbita pepo subsp. pepo]7.90e-5259.21Show/hide
Query:  MLGLFYLVSPMRFPILFFSTFLWIPLFRMKQAILGVVATVFGRPSSPQHGTD---LVVVRSYDE----DHGGSSEEICSICLTEFGRSEDSVCKLPNCEH
        MLGL +L S +   I+FF+TF+WIPLFR+K+AILG VA+VF   S P+  +     ++VR Y+E    D     EE+CSICLTEF R EDSVCKLP+C H
Subjt:  MLGLFYLVSPMRFPILFFSTFLWIPLFRMKQAILGVVATVFGRPSSPQHGTD---LVVVRSYDE----DHGGSSEEICSICLTEFGRSEDSVCKLPNCEH

Query:  LFHFNCIQEWIDRNRFTCPLCRCFFLEDNHKMDTKWRFLVPDNPSSLYYFLQ
        +FHF+CI++W +RNRFTCPLCRCFF  + H  + K RF+VPDNPSSLYYFLQ
Subjt:  LFHFNCIQEWIDRNRFTCPLCRCFFLEDNHKMDTKWRFLVPDNPSSLYYFLQ

TrEMBL top hitse value%identityAlignment
A0A0A0KFW5 RING-type domain-containing protein7.0e-6791.18Show/hide
Query:  MRFPILFFSTFLWIPLFRMKQAILGVVATVFGRPSSPQHGTDLVVVRSYDEDHGGSSEEICSICLTEFGRSEDSVCKLPNCEHLFHFNCIQEWIDRNRFT
        MRFPILFF+TFLWIPLFR+ QAILGVVATVFG PSSP+HGTDL+VVRSYDED GGSSEEICSICLTEFGRS DSVCKLPNCEHLFHFNCIQEWIDRNRFT
Subjt:  MRFPILFFSTFLWIPLFRMKQAILGVVATVFGRPSSPQHGTDLVVVRSYDEDHGGSSEEICSICLTEFGRSEDSVCKLPNCEHLFHFNCIQEWIDRNRFT

Query:  CPLCRC-FFLEDNHKMDTKWRFLVPDNPSSLYYFLQ
        CPLCRC FF EDN KMDTKW FLVPDNPSSLYYFLQ
Subjt:  CPLCRC-FFLEDNHKMDTKWRFLVPDNPSSLYYFLQ

A0A5A7TXY0 RING-H2 finger protein ATL18-like6.5e-8199.31Show/hide
Query:  MLGLFYLVSPMRFPILFFSTFLWIPLFRMKQAILGVVATVFGRPSSPQHGTDLVVVRSYDEDHGGSSEEICSICLTEFGRSEDSVCKLPNCEHLFHFNCI
        MLGLFYLVSPMRFPILFFSTFLWIPLFRMKQAILGVVATVFG PSSPQHGTDLVVVRSYDEDHGGSSEEICSICLTEFGRSEDSVCKLPNCEHLFHFNCI
Subjt:  MLGLFYLVSPMRFPILFFSTFLWIPLFRMKQAILGVVATVFGRPSSPQHGTDLVVVRSYDEDHGGSSEEICSICLTEFGRSEDSVCKLPNCEHLFHFNCI

Query:  QEWIDRNRFTCPLCRCFFLEDNHKMDTKWRFLVPDNPSSLYYFLQ
        QEWIDRNRFTCPLCRCFFLEDNHKMDTKWRFLVPDNPSSLYYFLQ
Subjt:  QEWIDRNRFTCPLCRCFFLEDNHKMDTKWRFLVPDNPSSLYYFLQ

A0A5D3BPT9 RING-H2 finger protein ATL18-like1.0e-81100Show/hide
Query:  MLGLFYLVSPMRFPILFFSTFLWIPLFRMKQAILGVVATVFGRPSSPQHGTDLVVVRSYDEDHGGSSEEICSICLTEFGRSEDSVCKLPNCEHLFHFNCI
        MLGLFYLVSPMRFPILFFSTFLWIPLFRMKQAILGVVATVFGRPSSPQHGTDLVVVRSYDEDHGGSSEEICSICLTEFGRSEDSVCKLPNCEHLFHFNCI
Subjt:  MLGLFYLVSPMRFPILFFSTFLWIPLFRMKQAILGVVATVFGRPSSPQHGTDLVVVRSYDEDHGGSSEEICSICLTEFGRSEDSVCKLPNCEHLFHFNCI

Query:  QEWIDRNRFTCPLCRCFFLEDNHKMDTKWRFLVPDNPSSLYYFLQ
        QEWIDRNRFTCPLCRCFFLEDNHKMDTKWRFLVPDNPSSLYYFLQ
Subjt:  QEWIDRNRFTCPLCRCFFLEDNHKMDTKWRFLVPDNPSSLYYFLQ

A0A6J1FTE6 RING-H2 finger protein ATL18-like7.3e-4059.21Show/hide
Query:  MLGLFYLVSPMRFPILFFSTFLWIPLFRMKQAILGVVATVFGRPSSPQHGTD---LVVVRSYDE----DHGGSSEEICSICLTEFGRSEDSVCKLPNCEH
        MLGL +L S +   I+FF+TF+WIPLFR+K+AILG VA+VF   S P+  +     ++VR Y+E    D     EE+CSICLTEF R EDSVCKLP+C H
Subjt:  MLGLFYLVSPMRFPILFFSTFLWIPLFRMKQAILGVVATVFGRPSSPQHGTD---LVVVRSYDE----DHGGSSEEICSICLTEFGRSEDSVCKLPNCEH

Query:  LFHFNCIQEWIDRNRFTCPLCRCFFLEDNHKMDTKWRFLVPDNPSSLYYFLQ
        +FHF+CI++W +RNRFTCPLCRCFF  + H  + K RF+VPDNPSSLYYFLQ
Subjt:  LFHFNCIQEWIDRNRFTCPLCRCFFLEDNHKMDTKWRFLVPDNPSSLYYFLQ

A0A6J1G855 E3 ubiquitin-protein ligase ATL41-like1.2e-3152.55Show/hide
Query:  ILFFSTFLWIPLFRMKQAILGVVAT--VFGRPSSPQHGTDLVVVRSYDE---DHGGSSEEICSICLTEFGRSEDSVCKLPNCEHLFHFNCIQEWIDRNRF
        I FF+T++WIPL R+K AI+G V+   +   P S       ++VR Y+E       + EEICSICL EF R  DSVC LP+C H+FHF+CI++W++RNRF
Subjt:  ILFFSTFLWIPLFRMKQAILGVVAT--VFGRPSSPQHGTDLVVVRSYDE---DHGGSSEEICSICLTEFGRSEDSVCKLPNCEHLFHFNCIQEWIDRNRF

Query:  TCPLCRCFFLED-NHKMDTKWRFLVPDNPSSLYYFLQ
        TCPLCRCFF  +  ++ + K +F+VPDNPS LYYFLQ
Subjt:  TCPLCRCFFLED-NHKMDTKWRFLVPDNPSSLYYFLQ

SwissProt top hitse value%identityAlignment
Q8GW38 RING-H2 finger protein ATL477.1e-0838.67Show/hide
Query:  DLVVVRSYDEDHGGSSEEICSICLTEFGRSEDSVCKLPNCEHLFHFNCIQEWIDRNRFTCPLCRCFFLEDNHKMD
        D + V  Y E  G      C++CL EF   +D +  LPNC H FH +CI  W+  N  TCPLCR       H+ +
Subjt:  DLVVVRSYDEDHGGSSEEICSICLTEFGRSEDSVCKLPNCEHLFHFNCIQEWIDRNRFTCPLCRCFFLEDNHKMD

Q9SUS4 Probable E3 ubiquitin-protein ligase RHA1A9.2e-0827.69Show/hide
Query:  MLGLFYLVSPMRFPILFFSTFLWIPLFRMKQAILGVVATVFGRPSSPQHGTDLVVVRSYDEDHGGSSEEICSICLTEFGRSEDSVCKLPNCEHLFHFNCI
        +L + Y++   R  +     ++ +P F           T     +S     +L+ V  +  D     E+ C++CL++F  S+D V +LP C H+FH  C+
Subjt:  MLGLFYLVSPMRFPILFFSTFLWIPLFRMKQAILGVVATVFGRPSSPQHGTDLVVVRSYDEDHGGSSEEICSICLTEFGRSEDSVCKLPNCEHLFHFNCI

Query:  QEWI-DRNRFTCPLCRCFFLEDNHKMDTKW
          WI D N+  CP+CR  FL       + W
Subjt:  QEWI-DRNRFTCPLCRCFFLEDNHKMDTKW

Q9SUS5 E3 ubiquitin-protein ligase RHA1B1.3e-0941.27Show/hide
Query:  EEICSICLTEFGRSEDSVCKLPNCEHLFHFNCIQEWI-DRNRFTCPLCRCFFLEDNHKMDTKW
        E+ C++CL++F  S+D + +LP C H+FH  C+  WI D N+ TCP+CR  FL +       W
Subjt:  EEICSICLTEFGRSEDSVCKLPNCEHLFHFNCIQEWI-DRNRFTCPLCRCFFLEDNHKMDTKW

Q9SZL4 RING-H2 finger protein ATL184.7e-1239.17Show/hide
Query:  MLGLFYLVSPMRFPILFFSTFLWIPLFRMKQAILGVVATVFGRPSSPQHGTDLVVVRSYDEDHGGSSEEI-CSICLTEFGRSEDSVCKLPNCEHLFHFNC
        M+ + +  SP+    + F T + IPL R+K+             +    G +LV V   D++     EEI C ICL EF  +ED+V  LP C HLFH NC
Subjt:  MLGLFYLVSPMRFPILFFSTFLWIPLFRMKQAILGVVATVFGRPSSPQHGTDLVVVRSYDEDHGGSSEEI-CSICLTEFGRSEDSVCKLPNCEHLFHFNC

Query:  IQEWIDRNRFTCPLCRCFFL
        I+ W+ R   TCPLCR F L
Subjt:  IQEWIDRNRFTCPLCRCFFL

Q9XF92 Brassinosteroid-responsive RING protein 12.4e-0837.5Show/hide
Query:  DLVVVRSYDE--DHGGSSEEICSICLTEFGRSEDSVCKLPNCEHLFHFNCIQEWIDRNRFTCPLCRCFFLED
        +++ V  ++E  + G    E C++CL EF   E  +  L NC H+FH +C+  W+D ++ TCPLCR  F+ D
Subjt:  DLVVVRSYDE--DHGGSSEEICSICLTEFGRSEDSVCKLPNCEHLFHFNCIQEWIDRNRFTCPLCRCFFLED

Arabidopsis top hitse value%identityAlignment
AT4G11360.1 RING-H2 finger A1B9.2e-1141.27Show/hide
Query:  EEICSICLTEFGRSEDSVCKLPNCEHLFHFNCIQEWI-DRNRFTCPLCRCFFLEDNHKMDTKW
        E+ C++CL++F  S+D + +LP C H+FH  C+  WI D N+ TCP+CR  FL +       W
Subjt:  EEICSICLTEFGRSEDSVCKLPNCEHLFHFNCIQEWI-DRNRFTCPLCRCFFLEDNHKMDTKW

AT4G38140.1 RING/U-box superfamily protein3.4e-1339.17Show/hide
Query:  MLGLFYLVSPMRFPILFFSTFLWIPLFRMKQAILGVVATVFGRPSSPQHGTDLVVVRSYDEDHGGSSEEI-CSICLTEFGRSEDSVCKLPNCEHLFHFNC
        M+ + +  SP+    + F T + IPL R+K+             +    G +LV V   D++     EEI C ICL EF  +ED+V  LP C HLFH NC
Subjt:  MLGLFYLVSPMRFPILFFSTFLWIPLFRMKQAILGVVATVFGRPSSPQHGTDLVVVRSYDEDHGGSSEEI-CSICLTEFGRSEDSVCKLPNCEHLFHFNC

Query:  IQEWIDRNRFTCPLCRCFFL
        I+ W+ R   TCPLCR F L
Subjt:  IQEWIDRNRFTCPLCRCFFL

AT5G37250.1 RING/U-box superfamily protein4.1e-1154.55Show/hide
Query:  DHGGSSEEICSICLTEFGRS-EDSVCKLPNCEHLFHFNCIQEWIDRNRFTCPLCR
        D G   E  CSICL +F  S +D++  LP+C HLFH NCI EW+ R R +CPLCR
Subjt:  DHGGSSEEICSICLTEFGRS-EDSVCKLPNCEHLFHFNCIQEWIDRNRFTCPLCR

AT5G37270.1 RING/U-box superfamily protein1.6e-1052.73Show/hide
Query:  DHGGSSEEICSICLTEFGRS-EDSVCKLPNCEHLFHFNCIQEWIDRNRFTCPLCR
        D G   E  CSICL +F  S +D++  LP+C HLFH +CI EW+ R R +CPLCR
Subjt:  DHGGSSEEICSICLTEFGRS-EDSVCKLPNCEHLFHFNCIQEWIDRNRFTCPLCR

AT5G41400.1 RING/U-box superfamily protein2.0e-1043.1Show/hide
Query:  GSSEEICSICLTEFGRSEDSVCKLPNCEHLFHFNCIQEW-IDRNRFTCPLCRCFFLED
        GS  + C++CL EF  ++D + +L NC+H+FH +C+  W +  N+ TCPLCR  F+ D
Subjt:  GSSEEICSICLTEFGRSEDSVCKLPNCEHLFHFNCIQEW-IDRNRFTCPLCRCFFLED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGGTTTGTTTTACCTCGTTTCACCTATGCGATTCCCCATCCTTTTCTTCAGCACTTTTCTGTGGATTCCTCTTTTTCGTATGAAGCAAGCCATTCTGGGCGTTGT
GGCTACTGTTTTTGGCCGGCCCTCCTCCCCACAACATGGAACTGACCTTGTGGTGGTCAGGTCATACGATGAGGATCATGGAGGATCGTCGGAGGAGATTTGCTCCATCT
GTTTGACGGAGTTTGGAAGATCAGAAGATTCGGTGTGTAAATTACCGAATTGTGAGCATTTATTTCATTTCAATTGCATCCAGGAATGGATTGACAGGAATCGCTTCACT
TGTCCCCTATGTAGATGCTTCTTCTTGGAAGACAACCACAAGATGGACACCAAGTGGAGATTCCTCGTTCCTGATAATCCTTCCTCTCTCTATTACTTCCTGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGGTTTGTTTTACCTCGTTTCACCTATGCGATTCCCCATCCTTTTCTTCAGCACTTTTCTGTGGATTCCTCTTTTTCGTATGAAGCAAGCCATTCTGGGCGTTGT
GGCTACTGTTTTTGGCCGGCCCTCCTCCCCACAACATGGAACTGACCTTGTGGTGGTCAGGTCATACGATGAGGATCATGGAGGATCGTCGGAGGAGATTTGCTCCATCT
GTTTGACGGAGTTTGGAAGATCAGAAGATTCGGTGTGTAAATTACCGAATTGTGAGCATTTATTTCATTTCAATTGCATCCAGGAATGGATTGACAGGAATCGCTTCACT
TGTCCCCTATGTAGATGCTTCTTCTTGGAAGACAACCACAAGATGGACACCAAGTGGAGATTCCTCGTTCCTGATAATCCTTCCTCTCTCTATTACTTCCTGCAATGATT
TGATCCTCT
Protein sequenceShow/hide protein sequence
MLGLFYLVSPMRFPILFFSTFLWIPLFRMKQAILGVVATVFGRPSSPQHGTDLVVVRSYDEDHGGSSEEICSICLTEFGRSEDSVCKLPNCEHLFHFNCIQEWIDRNRFT
CPLCRCFFLEDNHKMDTKWRFLVPDNPSSLYYFLQ