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IVF0013681 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013681
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr05:17080262..17080429
RNA-Seq ExpressionIVF0013681
SyntenyIVF0013681
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049907.1 retrotransposon protein [Cucumis melo var. makuwa]7.75e-31100Show/hide
Query:  MTYCEDVDDMDEGDSTYATTTASEDIHYIETTNEWSQWRDDLAELMFTDWQLRNA
        MTYCEDVDDMDEGDSTYATTTASEDIHYIETTNEWSQWRDDLAELMFTDWQLRNA
Subjt:  MTYCEDVDDMDEGDSTYATTTASEDIHYIETTNEWSQWRDDLAELMFTDWQLRNA
KAA0054051.1 retrotransposon protein [Cucumis melo var. makuwa]4.37e-3089.09Show/hide
Query:  MTYCEDVDDMDEGDSTYATTTASEDIHYIETTNEWSQWRDDLAELMFTDWQLRNA
        MTYC+D+DD+DEGDS YATTTASEDIHYIETTNEWSQWRD+LAE MFTDWQLRNA
Subjt:  MTYCEDVDDMDEGDSTYATTTASEDIHYIETTNEWSQWRDDLAELMFTDWQLRNA
KAA0062284.1 retrotransposon protein [Cucumis melo var. makuwa]1.52e-2889.09Show/hide
Query:  MTYCEDVDDMDEGDSTYATTTASEDIHYIETTNEWSQWRDDLAELMFTDWQLRNA
        MTYC+D+DD DEGDSTYATTTASEDI YIETTNEWSQWRDDLAE MFT+WQLRNA
Subjt:  MTYCEDVDDMDEGDSTYATTTASEDIHYIETTNEWSQWRDDLAELMFTDWQLRNA
TYK05336.1 retrotransposon protein [Cucumis melo var. makuwa]2.64e-2992.73Show/hide
Query:  MTYCEDVDDMDEGDSTYATTTASEDIHYIETTNEWSQWRDDLAELMFTDWQLRNA
        MTYCEDVDD DEGDSTYATTTASEDI YIETTNEWSQWRDDLAE MFTDWQLRN+
Subjt:  MTYCEDVDDMDEGDSTYATTTASEDIHYIETTNEWSQWRDDLAELMFTDWQLRNA
TYK07648.1 retrotransposon protein [Cucumis melo var. makuwa]6.70e-31100Show/hide
Query:  MTYCEDVDDMDEGDSTYATTTASEDIHYIETTNEWSQWRDDLAELMFTDWQLRNA
        MTYCEDVDDMDEGDSTYATTTASEDIHYIETTNEWSQWRDDLAELMFTDWQLRNA
Subjt:  MTYCEDVDDMDEGDSTYATTTASEDIHYIETTNEWSQWRDDLAELMFTDWQLRNA
TrEMBL top hitse value%identityAlignment
A0A5A7SL78 Retrotransposon protein2.9e-2192.73Show/hide
Query:  MTYCEDVDDMDEGDSTYATTTASEDIHYIETTNEWSQWRDDLAELMFTDWQLRNA
        MTYCEDVDD DEGDSTYATTTASEDI YIETTNEWSQWRDDL ELMFT+WQLRNA
Subjt:  MTYCEDVDDMDEGDSTYATTTASEDIHYIETTNEWSQWRDDLAELMFTDWQLRNA
A0A5A7U6D8 Retrotransposon protein6.2e-24100Show/hide
Query:  MTYCEDVDDMDEGDSTYATTTASEDIHYIETTNEWSQWRDDLAELMFTDWQLRNA
        MTYCEDVDDMDEGDSTYATTTASEDIHYIETTNEWSQWRDDLAELMFTDWQLRNA
Subjt:  MTYCEDVDDMDEGDSTYATTTASEDIHYIETTNEWSQWRDDLAELMFTDWQLRNA
A0A5A7VK86 Retrotransposon protein2.9e-2190.91Show/hide
Query:  MTYCEDVDDMDEGDSTYATTTASEDIHYIETTNEWSQWRDDLAELMFTDWQLRNA
        MTYCEDVDD+DEGDSTYATTTASEDIHYIETTNEWSQWRD+L E MFTDWQL NA
Subjt:  MTYCEDVDDMDEGDSTYATTTASEDIHYIETTNEWSQWRDDLAELMFTDWQLRNA
A0A5D3BDZ0 Retrotransposon protein2.9e-2189.09Show/hide
Query:  MTYCEDVDDMDEGDSTYATTTASEDIHYIETTNEWSQWRDDLAELMFTDWQLRNA
        MTYC+D+DD+DEGDS YATTTASEDIHYIETTNEWSQWRD+LAE MFTDWQLRNA
Subjt:  MTYCEDVDDMDEGDSTYATTTASEDIHYIETTNEWSQWRDDLAELMFTDWQLRNA
A0A5D3C8Z4 Retrotransposon protein6.2e-24100Show/hide
Query:  MTYCEDVDDMDEGDSTYATTTASEDIHYIETTNEWSQWRDDLAELMFTDWQLRNA
        MTYCEDVDDMDEGDSTYATTTASEDIHYIETTNEWSQWRDDLAELMFTDWQLRNA
Subjt:  MTYCEDVDDMDEGDSTYATTTASEDIHYIETTNEWSQWRDDLAELMFTDWQLRNA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGCGAGGACGTTGACGACATGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCACTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACGACTTAGCCGAATTGATGTTCACCGATTGGCAGTTGCGTAACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGCGAGGACGTTGACGACATGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCACTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACGACTTAGCCGAATTGATGTTCACCGATTGGCAGTTGCGTAACGCTTAG
Protein sequenceShow/hide protein sequence
MTYCEDVDDMDEGDSTYATTTASEDIHYIETTNEWSQWRDDLAELMFTDWQLRNA