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IVF0013751 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013751
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr10:21969313..21969501
RNA-Seq ExpressionIVF0013751
SyntenyIVF0013751
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041105.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.75e-2787.1Show/hide
Query:  MADITTETAMVEMERKVNFLMKVVEERDHEITALREQMRTCETAESSQTPVVKVTDKGKNVV
        MADIT + AMVEMERK+NFLMKVVEERDHEITALREQ+RT ETAESSQTP+VK TDKGKNVV
Subjt:  MADITTETAMVEMERKVNFLMKVVEERDHEITALREQMRTCETAESSQTPVVKVTDKGKNVV

KAA0048603.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.41e-2790.32Show/hide
Query:  MADITTETAMVEMERKVNFLMKVVEERDHEITALREQMRTCETAESSQTPVVKVTDKGKNVV
        MADIT E AM EMERK+NFLMKVVEERDHEITALREQMRT ETAESSQTPVVK TDKGKNVV
Subjt:  MADITTETAMVEMERKVNFLMKVVEERDHEITALREQMRTCETAESSQTPVVKVTDKGKNVV

KAA0056792.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.52e-32100Show/hide
Query:  MADITTETAMVEMERKVNFLMKVVEERDHEITALREQMRTCETAESSQTPVVKVTDKGKNVV
        MADITTETAMVEMERKVNFLMKVVEERDHEITALREQMRTCETAESSQTPVVKVTDKGKNVV
Subjt:  MADITTETAMVEMERKVNFLMKVVEERDHEITALREQMRTCETAESSQTPVVKVTDKGKNVV

TYK21903.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.39e-2787.1Show/hide
Query:  MADITTETAMVEMERKVNFLMKVVEERDHEITALREQMRTCETAESSQTPVVKVTDKGKNVV
        MADIT + AMVEMERK+NFLMKVVEERDHEITALREQ+RT ETAESSQTP+VK TDKGKNVV
Subjt:  MADITTETAMVEMERKVNFLMKVVEERDHEITALREQMRTCETAESSQTPVVKVTDKGKNVV

TYK22865.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]8.00e-2888.71Show/hide
Query:  MADITTETAMVEMERKVNFLMKVVEERDHEITALREQMRTCETAESSQTPVVKVTDKGKNVV
        MADITTE AM EM+RK+NFLMKVVEERDHEITALREQMRT ETAESSQTP+VK TDKGKNVV
Subjt:  MADITTETAMVEMERKVNFLMKVVEERDHEITALREQMRTCETAESSQTPVVKVTDKGKNVV

TrEMBL top hitse value%identityAlignment
A0A5A7TYE9 Ty3-gypsy retrotransposon protein1.0e-1990.32Show/hide
Query:  MADITTETAMVEMERKVNFLMKVVEERDHEITALREQMRTCETAESSQTPVVKVTDKGKNVV
        MADIT E AM EMERK+NFLMKVVEERDHEITALREQMRT ETAESSQTPVVK TDKGKNVV
Subjt:  MADITTETAMVEMERKVNFLMKVVEERDHEITALREQMRTCETAESSQTPVVKVTDKGKNVV

A0A5A7UG56 Ty3-gypsy retrotransposon protein4.0e-1988.71Show/hide
Query:  MADITTETAMVEMERKVNFLMKVVEERDHEITALREQMRTCETAESSQTPVVKVTDKGKNVV
        MADIT E AMVEMERK+NFLMK VEERDHEITALREQMRT ET ESSQTPVVK TDKGKNVV
Subjt:  MADITTETAMVEMERKVNFLMKVVEERDHEITALREQMRTCETAESSQTPVVKVTDKGKNVV

A0A5A7ULS4 Ty3-gypsy retrotransposon protein2.6e-23100Show/hide
Query:  MADITTETAMVEMERKVNFLMKVVEERDHEITALREQMRTCETAESSQTPVVKVTDKGKNVV
        MADITTETAMVEMERKVNFLMKVVEERDHEITALREQMRTCETAESSQTPVVKVTDKGKNVV
Subjt:  MADITTETAMVEMERKVNFLMKVVEERDHEITALREQMRTCETAESSQTPVVKVTDKGKNVV

A0A5A7VDN4 Ty3-gypsy retrotransposon protein3.0e-1988.71Show/hide
Query:  MADITTETAMVEMERKVNFLMKVVEERDHEITALREQMRTCETAESSQTPVVKVTDKGKNVV
        MADIT E AM EMERK+NFLMK VEERDHEITALREQMRT ETAESSQTPVVK TDKGKNVV
Subjt:  MADITTETAMVEMERKVNFLMKVVEERDHEITALREQMRTCETAESSQTPVVKVTDKGKNVV

A0A5D3DH20 Ty3-gypsy retrotransposon protein1.0e-1988.71Show/hide
Query:  MADITTETAMVEMERKVNFLMKVVEERDHEITALREQMRTCETAESSQTPVVKVTDKGKNVV
        MADITTE AM EM+RK+NFLMKVVEERDHEITALREQMRT ETAESSQTP+VK TDKGKNVV
Subjt:  MADITTETAMVEMERKVNFLMKVVEERDHEITALREQMRTCETAESSQTPVVKVTDKGKNVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATATAACGACTGAGACTGCCATGGTAGAGATGGAAAGGAAAGTTAACTTCCTGATGAAGGTTGTGGAGGAACGAGATCATGAAATCACAGCTCTCAGAGAGCA
GATGCGGACTTGTGAAACCGCTGAGTCAAGTCAAACTCCTGTTGTTAAAGTGACTGATAAAGGGAAGAATGTGGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGATATAACGACTGAGACTGCCATGGTAGAGATGGAAAGGAAAGTTAACTTCCTGATGAAGGTTGTGGAGGAACGAGATCATGAAATCACAGCTCTCAGAGAGCA
GATGCGGACTTGTGAAACCGCTGAGTCAAGTCAAACTCCTGTTGTTAAAGTGACTGATAAAGGGAAGAATGTGGTGTAG
Protein sequenceShow/hide protein sequence
MADITTETAMVEMERKVNFLMKVVEERDHEITALREQMRTCETAESSQTPVVKVTDKGKNVV