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IVF0013792 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013792
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPol protein
Genome locationchr01:21790214..21790453
RNA-Seq ExpressionIVF0013792
SyntenyIVF0013792
Gene Ontology termsNA
InterPro domainsIPR016197 - Chromo-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043066.1 pol protein [Cucumis melo var. makuwa]2.74e-4893.67Show/hide
Query:  MLRKYVPDPSHVVDFEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG
        MLRKYVPDPSHVVD+EPLEIDENLSY EQPVE+LAREVKTLRNKEIPLVKVLWRNHR+EEATWEREDDMR RYPELFEG
Subjt:  MLRKYVPDPSHVVDFEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG

KAA0053367.1 pol protein [Cucumis melo var. makuwa]6.15e-4896.15Show/hide
Query:  MLRKYVPDPSHVVDFEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFE
        MLRKYVPDPSHVVD+EPLEIDENLSYTEQPVE+LAREVKTLRNKEIPLVKVLWRNHR+EEATWEREDDMRSRYPELFE
Subjt:  MLRKYVPDPSHVVDFEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFE

KAA0054732.1 pol protein [Cucumis melo var. makuwa]6.15e-4896.15Show/hide
Query:  MLRKYVPDPSHVVDFEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFE
        MLRKYVPDPSHVVD+EPLEIDENLSYTEQPVE+LAREVKTLRNKEIPLVKVLWRNHR+EEATWEREDDMRSRYPELFE
Subjt:  MLRKYVPDPSHVVDFEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFE

KAA0059496.1 pol protein [Cucumis melo var. makuwa]6.15e-4897.47Show/hide
Query:  MLRKYVPDPSHVVDFEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG
        MLRKYVPDPSHVVD+EPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPEL EG
Subjt:  MLRKYVPDPSHVVDFEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG

KAA0059750.1 pol protein [Cucumis melo var. makuwa]6.29e-4892.41Show/hide
Query:  MLRKYVPDPSHVVDFEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG
        MLRKYVPDPSHVVD+EPLEIDENLSY EQP+E+LAREVKTLRNKEIPLVKVLWRNHR+EEATWEREDDMRSRYP+LFEG
Subjt:  MLRKYVPDPSHVVDFEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG

TrEMBL top hitse value%identityAlignment
A0A5A7SSB3 Pol protein2.0e-3694.94Show/hide
Query:  MLRKYVPDPSHVVDFEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG
        MLRKYVPDPSHVVD+EPLEIDENLSYTEQPVE+LAREVKTLRNKEIPLVKVLW+NHR+EEATWEREDDMRSRYPELFEG
Subjt:  MLRKYVPDPSHVVDFEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG

A0A5A7T8G8 Reverse transcriptase7.0e-3796.2Show/hide
Query:  MLRKYVPDPSHVVDFEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG
        MLRKYVPDPSHVVD+EPLEIDENLSYTEQPVE+LAREVKTLRNKEIPLVKVLWRNHR+EEATWEREDDMRSRYPELFEG
Subjt:  MLRKYVPDPSHVVDFEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG

A0A5A7TGX4 Reverse transcriptase2.7e-3694.94Show/hide
Query:  MLRKYVPDPSHVVDFEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG
        MLRKYVPDPSHVVD+EPLEIDENLSY EQPVE+LAREVKTLRNKEIPLVKVLWRNHR+EEATWEREDDMRSRYPELFEG
Subjt:  MLRKYVPDPSHVVDFEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG

A0A5A7UDB1 Reverse transcriptase2.7e-3694.94Show/hide
Query:  MLRKYVPDPSHVVDFEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG
        MLRKYVPDPSHVVD+EPLEIDENLSYTEQPVE+LAREVKTLR+KEIPLVKVLWRNHR+EEATWEREDDMRSRYPELFEG
Subjt:  MLRKYVPDPSHVVDFEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG

A0A5A7UZZ4 Pol protein7.0e-3797.47Show/hide
Query:  MLRKYVPDPSHVVDFEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG
        MLRKYVPDPSHVVD+EPLEIDEN+SYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG
Subjt:  MLRKYVPDPSHVVDFEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTTCGAGCCACTGGAAATTGATGAAAACTTGAGCTATACCGAACAGCCCGTTGAGATACTGGCTAGAGA
GGTGAAAACGTTGAGGAATAAGGAAATCCCTCTGGTTAAAGTCTTATGGCGGAATCACCGGATAGAAGAGGCTACGTGGGAGCGAGAAGATGACATGAGGTCCCGTTATC
CCGAACTGTTCGAGGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTTCGAGCCACTGGAAATTGATGAAAACTTGAGCTATACCGAACAGCCCGTTGAGATACTGGCTAGAGA
GGTGAAAACGTTGAGGAATAAGGAAATCCCTCTGGTTAAAGTCTTATGGCGGAATCACCGGATAGAAGAGGCTACGTGGGAGCGAGAAGATGACATGAGGTCCCGTTATC
CCGAACTGTTCGAGGGGTAA
Protein sequenceShow/hide protein sequence
MLRKYVPDPSHVVDFEPLEIDENLSYTEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG