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IVF0013811 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013811
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionU-box domain-containing protein 4
Genome locationchr10:16109890..16110205
RNA-Seq ExpressionIVF0013811
SyntenyIVF0013811
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000225 - Armadillo
IPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035911.1 gag-protease polyprotein [Cucumis melo var. makuwa]1.65e-37100Show/hide
Query:  MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT
        MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT
Subjt:  MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT

XP_004134799.1 U-box domain-containing protein 4 [Cucumis sativus]6.28e-3390.28Show/hide
Query:  MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT
        MSLALLEENKTSIGVCG IPPLVSLLLNGSNR KKDALTTLYKLC IKPN E+A+TA AVKPLVALVAEQGT
Subjt:  MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT

XP_008440076.1 PREDICTED: U-box domain-containing protein 4 [Cucumis melo]6.28e-3390.28Show/hide
Query:  MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT
        MSLALLEENKTSIGVCG IPPLVSLLLNGSNR KKDALTTLYKLC IKPN E+A+TA AVKPLVALVAEQGT
Subjt:  MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT

XP_023518630.1 U-box domain-containing protein 4-like [Cucurbita pepo subsp. pepo]2.37e-3288.89Show/hide
Query:  MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT
        MSLALLEENKTSIGVCG IPPLVSLLLNGSNR KKDALTTLYKLC IKPN E+ +TA AVKPLVALVAEQGT
Subjt:  MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT

XP_038881710.1 U-box domain-containing protein 4 [Benincasa hispida]6.28e-3390.28Show/hide
Query:  MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT
        MSLALLEENKTSIGVCG IPPLVSLLLNGSNR KKDALTTLYKLC IKPN E+A+TA AVKPLVALVAEQGT
Subjt:  MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT

TrEMBL top hitse value%identityAlignment
A0A0A0KL34 Uncharacterized protein3.0e-2690.28Show/hide
Query:  MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT
        MSLALLEENKTSIGVCG IPPLVSLLLNGSNR KKDALTTLYKLC IKPN E+A+TA AVKPLVALVAEQGT
Subjt:  MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT

A0A1S3B089 U-box domain-containing protein 43.0e-2690.28Show/hide
Query:  MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT
        MSLALLEENKTSIGVCG IPPLVSLLLNGSNR KKDALTTLYKLC IKPN E+A+TA AVKPLVALVAEQGT
Subjt:  MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT

A0A5D3CRG4 U-box domain-containing protein 43.0e-2690.28Show/hide
Query:  MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT
        MSLALLEENKTSIGVCG IPPLVSLLLNGSNR KKDALTTLYKLC IKPN E+A+TA AVKPLVALVAEQGT
Subjt:  MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT

A0A5D3D6A7 Gag-protease polyprotein1.5e-30100Show/hide
Query:  MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT
        MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT
Subjt:  MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT

A0A6J1KQR1 U-box domain-containing protein 4-like8.6e-2688.89Show/hide
Query:  MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT
        MSLALLEENKTSIGVCG IPPLVSLLLNGSNR KKDALTTLYKLC IKPN E+ +TA AVKPLVALVAEQGT
Subjt:  MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT

SwissProt top hitse value%identityAlignment
Q681N2 U-box domain-containing protein 157.6e-1150.72Show/hide
Query:  SLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQ
        SL++L+ENK +IG+  GIPPLV LL +G+ R KKDALT L+ L L   N  +AI A  V+PL+ L+ ++
Subjt:  SLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQ

Q8VZ40 U-box domain-containing protein 142.4e-0941.43Show/hide
Query:  SLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQG
        SL++++ENK +IG  G I  L+SLL  G+ R KKDA T ++ LC+ + N  +A+    V PL  L+ + G
Subjt:  SLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQG

Q9C9A6 U-box domain-containing protein 103.2e-0946.48Show/hide
Query:  SLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT
        SL+L +ENK  IG  G I  LV LL  GS R KKDA T L+ LC+ + N  +A+ A  VKPLV ++ +  +
Subjt:  SLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT

Q9SNC6 U-box domain-containing protein 139.9e-1146.48Show/hide
Query:  SLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT
        SL++++ENK +IG  G IPPLV LL  G+ R KKDA T L+ LC+ + N  +AI A  +  L  L+ E G+
Subjt:  SLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT

Q9ZV31 U-box domain-containing protein 125.8e-1148.53Show/hide
Query:  SLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAE
        SL++++ENK +IG  G IPPLV+LL  GS R KKDA T L+ LC+ + N  +A+ A  V  L+ L+ E
Subjt:  SLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAE

Arabidopsis top hitse value%identityAlignment
AT2G28830.1 PLANT U-BOX 124.1e-1248.53Show/hide
Query:  SLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAE
        SL++++ENK +IG  G IPPLV+LL  GS R KKDA T L+ LC+ + N  +A+ A  V  L+ L+ E
Subjt:  SLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAE

AT3G01400.1 ARM repeat superfamily protein1.6e-1148.61Show/hide
Query:  MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT
        + L+ +EENK +IG  G IP LV+LL  G  R KKDA T LY LC  K N  +A+ +  +KPLV L+A+ G+
Subjt:  MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT

AT3G46510.1 plant U-box 137.0e-1246.48Show/hide
Query:  SLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT
        SL++++ENK +IG  G IPPLV LL  G+ R KKDA T L+ LC+ + N  +AI A  +  L  L+ E G+
Subjt:  SLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT

AT4G16490.1 ARM repeat superfamily protein9.4e-2577.78Show/hide
Query:  MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT
        +SLALLEENK SIG CG IPPLVSLLLNGS R KKDALTTLYKLC ++ N E+A+TA AVKPLV LVAE+GT
Subjt:  MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGT

AT5G42340.1 Plant U-Box 155.4e-1250.72Show/hide
Query:  SLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQ
        SL++L+ENK +IG+  GIPPLV LL +G+ R KKDALT L+ L L   N  +AI A  V+PL+ L+ ++
Subjt:  SLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCTTGCTTTGTTGGAGGAAAACAAAACTTCGATTGGGGTTTGCGGGGGCATTCCACCACTGGTATCTTTACTACTGAATGGATCAAATAGAAGGAAGAAGGACGC
GCTCACGACGCTCTATAAGCTTTGCTTGATCAAACCAAATAACGAGCAGGCCATCACTGCTCGAGCTGTGAAGCCATTGGTGGCGCTAGTAGCGGAGCAAGGTACGATAA
CCTGGCTGGGATTCAAGAGGGAAAGGATACGATTGTGGAAGAGGGTGGAATTGCTGCGCTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCCTTGCTTTGTTGGAGGAAAACAAAACTTCGATTGGGGTTTGCGGGGGCATTCCACCACTGGTATCTTTACTACTGAATGGATCAAATAGAAGGAAGAAGGACGC
GCTCACGACGCTCTATAAGCTTTGCTTGATCAAACCAAATAACGAGCAGGCCATCACTGCTCGAGCTGTGAAGCCATTGGTGGCGCTAGTAGCGGAGCAAGGTACGATAA
CCTGGCTGGGATTCAAGAGGGAAAGGATACGATTGTGGAAGAGGGTGGAATTGCTGCGCTTGTAG
Protein sequenceShow/hide protein sequence
MSLALLEENKTSIGVCGGIPPLVSLLLNGSNRRKKDALTTLYKLCLIKPNNEQAITARAVKPLVALVAEQGTITWLGFKRERIRLWKRVELLRL