| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0042324.1 Retrovirus-related Pol polyprotein from transposon 297 family [Cucumis melo var. makuwa] | 1.16e-94 | 66.14 | Show/hide |
Query: HDKFNELIDQATLEYVDNEFAKEKPSDDDLSIFFDFVTSINDEHALVDNVTTHEQHALGNNFASNNEHDLGRDIKDDNEQILKSIGIDNDHDINTHIENF
HDKFNELIDQATLE+V+NEFAK KPSDDDLSIF DFVTS+NDE+ LVDN+ T+E H N+F S+NEHD GR+IKDD+E ILKSI I+NDHD + HI+NF
Subjt: HDKFNELIDQATLEYVDNEFAKEKPSDDDLSIFFDFVTSINDEHALVDNVTTHEQHALGNNFASNNEHDLGRDIKDDNEQILKSIGIDNDHDINTHIENF
Query: EKENDLENDSSCEVYLHKECSSFSP---------------------QICVLGIKETYPVIISKELTEEQEARLLETLKRHRQAIGEKNKVQPQRRFNPTL
EKENDLE D CEV LHKEC S + + LG K TY VIISKELT+EQEARLLETLK HRQAIG KNK+QPQRR NP L
Subjt: EKENDLENDSSCEVYLHKECSSFSP---------------------QICVLGIKETYPVIISKELTEEQEARLLETLKRHRQAIGEKNKVQPQRRFNPTL
Query: KKIVKKEVLKLKDASIIY-----TWVSPIHVIPKKTGMTIMENSQGEFVPTHVS
K+ VKKEV KLKD IIY TWVS I+V+PKKTGMTI+ENSQG+FV T VS
Subjt: KKIVKKEVLKLKDASIIY-----TWVSPIHVIPKKTGMTIMENSQGEFVPTHVS
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| KAA0053241.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa] | 4.33e-89 | 67.54 | Show/hide |
Query: GNNFASNNEHDLGRDIKDDNEQILKSIGIDNDHDINTHIENFEKENDLENDSSCEVYLHKECSSFSPQICVLGIKETYPVIISKELTEEQEARLLETLKR
GNNFAS+NEHDLG+DIKDD+EQILKSIGIDNDHD +THIENFEKENDLENDS CEVYLHKEC + + L +++ I KEL EE+EARLLETLKR
Subjt: GNNFASNNEHDLGRDIKDDNEQILKSIGIDNDHDINTHIENFEKENDLENDSSCEVYLHKECSSFSPQICVLGIKETYPVIISKELTEEQEARLLETLKR
Query: HRQAIG-----------------------EKNKVQPQRRFNPTLKKIVKKEVLKLKDASIIY-----TWVSPIHVIPKKTGMTIMENSQGEFVPTHVSNS
HRQAIG KN +QPQR FNPTLK++ KKEVLKLKD IIY TWVSPIHV+PKKT MTIMENSQGEFVPTHVSNS
Subjt: HRQAIG-----------------------EKNKVQPQRRFNPTLKKIVKKEVLKLKDASIIY-----TWVSPIHVIPKKTGMTIMENSQGEFVPTHVSNS
Query: LCRCIYYRKLNEVTLKNHFHLPFLDQII
C CI YRKLNEVT K+HF LPFLDQ++
Subjt: LCRCIYYRKLNEVTLKNHFHLPFLDQII
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| KAA0065429.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa] | 1.43e-88 | 61.34 | Show/hide |
Query: MNNEFACTSPTILLGKLLLKTTKAIINVDKGLARVEFDGDVHDKFNELIDQATLEYVDNEFAKEKPSDDDLSIFFDFVTSINDEHALVDNVTTHEQHALG
MN EFA TSPTILLG+ LKT KAIINVDKGL VEFDG+V FN ++VDNEFAKEKP+DDDLSIF +FVTSINDEHALVDNVTTHEQHALG
Subjt: MNNEFACTSPTILLGKLLLKTTKAIINVDKGLARVEFDGDVHDKFNELIDQATLEYVDNEFAKEKPSDDDLSIFFDFVTSINDEHALVDNVTTHEQHALG
Query: NNFASNNEHDLGRDIKDDNEQILKSIGIDNDHDINTHIENFEKENDLENDSSCEVYLHKECSSFSPQICVLGIKETYPVIISKELTEEQEARLLETLKRH
NNF S+NEHDLGRDIKDD+EQILKSI IDNDHDINTHI+NFEKENDL+NDS E + + F + LG K TY V++S E + L +
Subjt: NNFASNNEHDLGRDIKDDNEQILKSIGIDNDHDINTHIENFEKENDLENDSSCEVYLHKECSSFSPQICVLGIKETYPVIISKELTEEQEARLLETLKRH
Query: RQAIGEKNKVQPQRRFNPTLKKIVKKEVLKLKDASIIY-----TWVSPIHVIPKKTGMTIMENSQGEFV
G+ + + FNPTLK++VKKEVLKLKD IIY TW++PIHV+ KK MTI++NSQ + +
Subjt: RQAIGEKNKVQPQRRFNPTLKKIVKKEVLKLKDASIIY-----TWVSPIHVIPKKTGMTIMENSQGEFV
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| KAA0066992.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa] | 2.09e-63 | 53.06 | Show/hide |
Query: HDKFNELIDQATLEYVDNEFAKEKPSDDDLSIFFDFVTSINDEHALVDNVTTHEQHALGNNFASNNEHDLGRDIKDDNEQILKSIGIDNDHDINTHIENF
HD FNELIDQATLEYV+NEFAK KPSDDDLSIF FV S+NDEH VDN+ T+EQHAL N+F S+NEHDLGR+IKDDN I+K + + + +H+
Subjt: HDKFNELIDQATLEYVDNEFAKEKPSDDDLSIFFDFVTSINDEHALVDNVTTHEQHALGNNFASNNEHDLGRDIKDDNEQILKSIGIDNDHDINTHIENF
Query: EKENDLENDSSCEVYLHKECSSFSPQICVLGIKETYPVIISKELTEEQEARLLETLKRHRQAIG-----------------------EKNKVQPQRRFNP
+ L K TYPVII KELT+EQEARL ETLKR+RQA G KNK+Q QRR NP
Subjt: EKENDLENDSSCEVYLHKECSSFSPQICVLGIKETYPVIISKELTEEQEARLLETLKRHRQAIG-----------------------EKNKVQPQRRFNP
Query: TLKKIVKKEVLKLKDASIIY-----TWVSPIHVIPKKTGMTIMEN
TLK++VKKEVLKLKD IIY TWVS IHV+PKK +TI+EN
Subjt: TLKKIVKKEVLKLKDASIIY-----TWVSPIHVIPKKTGMTIMEN
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| KAE8647060.1 hypothetical protein Csa_022980 [Cucumis sativus] | 1.05e-90 | 57.99 | Show/hide |
Query: MNNEFACTSPTILLGKLLLKTTKAIINVDKGLARVEFDGDV--------------------------------HDKFNELIDQATLEYVDNEFAKEKPSD
MN+EFA TSPTILLG+ LLKT KA+INVDKGL VEFDGDV DK NELIDQATLEYVDNEF+KEKPSD
Subjt: MNNEFACTSPTILLGKLLLKTTKAIINVDKGLARVEFDGDV--------------------------------HDKFNELIDQATLEYVDNEFAKEKPSD
Query: DDLSIFFDFVTSINDEHALVDNVTTHEQHALGNNFASNNEHDLGRDIKDDNEQILKSIGIDNDHDINTHIENFEK-ENDLENDSSCEVYLHKECSSFSP-
DDLSIF +FV SINDEHALVDNVTTH+QHALGNNFAS+ E DLGRDIKD++EQ LK I IDN+ D + HI +K ENDLEND CEVYLHKEC +F+
Subjt: DDLSIFFDFVTSINDEHALVDNVTTHEQHALGNNFASNNEHDLGRDIKDDNEQILKSIGIDNDHDINTHIENFEK-ENDLENDSSCEVYLHKECSSFSP-
Query: ------------------------QICVLGIKETYPVIISKELTEEQEARLLETLKRHRQAIG-----------------------EKNKVQPQRRFNPT
+ LG K TYP IISKELTEEQEARLLETLKRH+QAIG KNKVQPQR NPT
Subjt: ------------------------QICVLGIKETYPVIISKELTEEQEARLLETLKRHRQAIG-----------------------EKNKVQPQRRFNPT
Query: LKKIVKKEVLKLKDASIIY
LK++VKKEVLKLK A IIY
Subjt: LKKIVKKEVLKLKDASIIY
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7UI66 Transposon Ty3-I Gag-Pol polyprotein | 1.2e-71 | 67.54 | Show/hide |
Query: GNNFASNNEHDLGRDIKDDNEQILKSIGIDNDHDINTHIENFEKENDLENDSSCEVYLHKECSSFSPQICVLGIKETYPVIISKELTEEQEARLLETLKR
GNNFAS+NEHDLG+DIKDD+EQILKSIGIDNDHD +THIENFEKENDLEND SCEVYLHKEC + + L +++ I KEL EE+EARLLETLKR
Subjt: GNNFASNNEHDLGRDIKDDNEQILKSIGIDNDHDINTHIENFEKENDLENDSSCEVYLHKECSSFSPQICVLGIKETYPVIISKELTEEQEARLLETLKR
Query: HRQAIG-----------------------EKNKVQPQRRFNPTLKKIVKKEVLKLKDASIIY-----TWVSPIHVIPKKTGMTIMENSQGEFVPTHVSNS
HRQAIG KN +QPQR FNPTLK++ KKEVLKLKD IIY TWVSPIHV+PKKT MTIMENSQGEFVPTHVSNS
Subjt: HRQAIG-----------------------EKNKVQPQRRFNPTLKKIVKKEVLKLKDASIIY-----TWVSPIHVIPKKTGMTIMENSQGEFVPTHVSNS
Query: LCRCIYYRKLNEVTLKNHFHLPFLDQII
C CI YRKLNEVT K+HF LPFLDQ++
Subjt: LCRCIYYRKLNEVTLKNHFHLPFLDQII
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| A0A5A7VIZ2 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.6e-73 | 61.34 | Show/hide |
Query: MNNEFACTSPTILLGKLLLKTTKAIINVDKGLARVEFDGDVHDKFNELIDQATLEYVDNEFAKEKPSDDDLSIFFDFVTSINDEHALVDNVTTHEQHALG
MN EFA TSPTILLG+ LKT KAIINVDKGL VEFDG+V FN ++VDNEFAKEKP+DDDLSIF +FVTSINDEHALVDNVTTHEQHALG
Subjt: MNNEFACTSPTILLGKLLLKTTKAIINVDKGLARVEFDGDVHDKFNELIDQATLEYVDNEFAKEKPSDDDLSIFFDFVTSINDEHALVDNVTTHEQHALG
Query: NNFASNNEHDLGRDIKDDNEQILKSIGIDNDHDINTHIENFEKENDLENDSSCEVYLHKECSSFSPQICVLGIKETYPVIISKELTEEQEARLLETLKRH
NNF S+NEHDLGRDIKDD+EQILKSI IDNDHDINTHI+NFEKENDL+NDS E + + F + LG K TY V++S E + L++
Subjt: NNFASNNEHDLGRDIKDDNEQILKSIGIDNDHDINTHIENFEKENDLENDSSCEVYLHKECSSFSPQICVLGIKETYPVIISKELTEEQEARLLETLKRH
Query: RQAIGEKNKVQPQRRFNPTLKKIVKKEVLKLKDASIIY-----TWVSPIHVIPKKTGMTIMENSQGEFV
G+ + + FNPTLK++VKKEVLKLKD IIY TW++PIHV+ KK MTI++NSQ + +
Subjt: RQAIGEKNKVQPQRRFNPTLKKIVKKEVLKLKDASIIY-----TWVSPIHVIPKKTGMTIMENSQGEFV
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| A0A5D3BDS0 Transposon Ty3-I Gag-Pol polyprotein | 2.5e-53 | 53.06 | Show/hide |
Query: HDKFNELIDQATLEYVDNEFAKEKPSDDDLSIFFDFVTSINDEHALVDNVTTHEQHALGNNFASNNEHDLGRDIKDDNEQILKSIGIDNDHDINTHIENF
HD FNELIDQATLEYV+NEFAK KPSDDDLSIF FV S+NDEH VDN+ T+EQHAL N+F S+NEHDLGR+IKDDN I+K + + + +H+
Subjt: HDKFNELIDQATLEYVDNEFAKEKPSDDDLSIFFDFVTSINDEHALVDNVTTHEQHALGNNFASNNEHDLGRDIKDDNEQILKSIGIDNDHDINTHIENF
Query: EKENDLENDSSCEVYLHKECSSFSPQICVLGIKETYPVIISKELTEEQEARLLETLKRHRQAI-----------------------GEKNKVQPQRRFNP
+ L K TYPVII KELT+EQEARL ETLKR+RQA G KNK+Q QRR NP
Subjt: EKENDLENDSSCEVYLHKECSSFSPQICVLGIKETYPVIISKELTEEQEARLLETLKRHRQAI-----------------------GEKNKVQPQRRFNP
Query: TLKKIVKKEVLKLKDASIIY-----TWVSPIHVIPKKTGMTIMEN
TLK++VKKEVLKLKD IIY TWVS IHV+PKK +TI+EN
Subjt: TLKKIVKKEVLKLKDASIIY-----TWVSPIHVIPKKTGMTIMEN
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| A0A5D3CW21 Retrovirus-related Pol polyprotein from transposon 297 family | 1.9e-77 | 66.14 | Show/hide |
Query: HDKFNELIDQATLEYVDNEFAKEKPSDDDLSIFFDFVTSINDEHALVDNVTTHEQHALGNNFASNNEHDLGRDIKDDNEQILKSIGIDNDHDINTHIENF
HDKFNELIDQATLE+V+NEFAK KPSDDDLSIF DFVTS+NDE+ LVDN+ T+E H N+F S+NEHD GR+IKDD+E ILKSI I+NDHD + HI+NF
Subjt: HDKFNELIDQATLEYVDNEFAKEKPSDDDLSIFFDFVTSINDEHALVDNVTTHEQHALGNNFASNNEHDLGRDIKDDNEQILKSIGIDNDHDINTHIENF
Query: EKENDLENDSSCEVYLHKECSSFSP---------------------QICVLGIKETYPVIISKELTEEQEARLLETLKRHRQAIGEKNKVQPQRRFNPTL
EKENDLE D CEV LHKEC S + + LG K TY VIISKELT+EQEARLLETLK HRQAIG KNK+QPQRR NP L
Subjt: EKENDLENDSSCEVYLHKECSSFSP---------------------QICVLGIKETYPVIISKELTEEQEARLLETLKRHRQAIGEKNKVQPQRRFNPTL
Query: KKIVKKEVLKLKDASIIY-----TWVSPIHVIPKKTGMTIMENSQGEFVPTHVS
K+ VKKEV KLKD IIY TWVS I+V+PKKTGMTI+ENSQG+FV T VS
Subjt: KKIVKKEVLKLKDASIIY-----TWVSPIHVIPKKTGMTIMENSQGEFVPTHVS
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| A0A5D3D5G7 Uncharacterized protein | 1.2e-39 | 62.84 | Show/hide |
Query: MNNEFACTSPTILLGKLLLKTTKAIINVDKGLARVEF--DGDVHDKFNELIDQATLEYVDNEFAKEKPSDDDLSIFFDFVTSINDEHALVDNVTTHEQHA
MNN +ACTSPTILLG+ LKT KA INVDKGL VEF + HDKFNEL DQATL++V+ EFAK KPS+DDLSIF DFV S+NDEH LVDN+ T+ H
Subjt: MNNEFACTSPTILLGKLLLKTTKAIINVDKGLARVEF--DGDVHDKFNELIDQATLEYVDNEFAKEKPSDDDLSIFFDFVTSINDEHALVDNVTTHEQHA
Query: LGNNFASNNEHDLGRDIKDDNEQILKSIGIDNDHDINTHIENFEKEND
L N+FAS+NEHDLGR+I +D+E LK GIDN++D+ T++ E D
Subjt: LGNNFASNNEHDLGRDIKDDNEQILKSIGIDNDHDINTHIENFEKEND
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