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IVF0013853 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013853
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr08:18235308..18235526
RNA-Seq ExpressionIVF0013853
SyntenyIVF0013853
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041782.1 uncharacterized protein E6C27_scaffold67G001450 [Cucumis melo var. makuwa]4.40e-1461.11Show/hide
Query:  MELRGRPRRVRQVATDFPATGSANGAQASDEMSSNPHESMGRSIGENMSRHFSQKLDKRFSTERLKALRAIT
        M  RGR R+VRQV  D P T S N AQASDE+SSNPH S+G+   E M     QK+DKRFS ERLKAL A T
Subjt:  MELRGRPRRVRQVATDFPATGSANGAQASDEMSSNPHESMGRSIGENMSRHFSQKLDKRFSTERLKALRAIT

KAA0046177.1 uncharacterized protein E6C27_scaffold376G00360 [Cucumis melo var. makuwa]6.67e-1255.56Show/hide
Query:  MELRGRPRRVRQVATDFPATGSANGAQASDEMSSNPHESMGRSIGENMSRHFSQKLDKRFSTERLKALRAIT
        ME RGR RRVR++ATD PA  S N  QAS+E+SSN +  +GR  GE M+     KLDKRF  +RLKAL  +T
Subjt:  MELRGRPRRVRQVATDFPATGSANGAQASDEMSSNPHESMGRSIGENMSRHFSQKLDKRFSTERLKALRAIT

KAA0056324.1 hypothetical protein E6C27_scaffold186G00150 [Cucumis melo var. makuwa]4.55e-0960.66Show/hide
Query:  QVATDFPATGSANGAQASDEMSSNPHESMGRSIGENMSRHFSQKLDKRFSTERLKALRAIT
        +VATD PAT +AN  QA DEMSSN  E+M   +G+N   H SQKL+KRFS ERL AL A T
Subjt:  QVATDFPATGSANGAQASDEMSSNPHESMGRSIGENMSRHFSQKLDKRFSTERLKALRAIT

KAA0067233.1 uncharacterized protein E6C27_scaffold418G00440 [Cucumis melo var. makuwa]8.56e-1161.19Show/hide
Query:  RGRPRRVRQVATDFPATGSANGAQASDEMSSNPHESMGRSIGENMSRHFSQKLDKRFSTERLKALRA
        RGR R+VRQVA D  ATGS N AQASDE+SSNPH  +GR   ENMS H  + +D      RLKALRA
Subjt:  RGRPRRVRQVATDFPATGSANGAQASDEMSSNPHESMGRSIGENMSRHFSQKLDKRFSTERLKALRA

TYK29193.1 uncharacterized protein E5676_scaffold880G00030 [Cucumis melo var. makuwa]1.07e-1568.18Show/hide
Query:  MELRGRPRRVRQVATDFPATGSANGAQASDEMSSNPHESMGRSIGENMSRHFSQKLDKRFSTERLK
        M  RGRPR+VRQVATD PAT S N AQA  EMSSNPHE +GR   E M   F QKLDKRFS ER K
Subjt:  MELRGRPRRVRQVATDFPATGSANGAQASDEMSSNPHESMGRSIGENMSRHFSQKLDKRFSTERLK

TrEMBL top hitse value%identityAlignment
A0A5A7TWA5 Uncharacterized protein3.6e-0855.56Show/hide
Query:  MELRGRPRRVRQVATDFPATGSANGAQASDEMSSNPHESMGRSIGENMSRHFSQKLDKRFSTERLKALRAIT
        ME RGR RRVR++ATD PA  S N  QAS+E+SSN +  +GR  GE M+     KLDKRF  +RLKAL  +T
Subjt:  MELRGRPRRVRQVATDFPATGSANGAQASDEMSSNPHESMGRSIGENMSRHFSQKLDKRFSTERLKALRAIT

A0A5A7UMA7 Retrotrans_gag domain-containing protein9.0e-0760.66Show/hide
Query:  QVATDFPATGSANGAQASDEMSSNPHESMGRSIGENMSRHFSQKLDKRFSTERLKALRAIT
        +VATD PAT +AN  QA DEMSSN  E+M   +G+N   H SQKL+KRFS ERL AL A T
Subjt:  QVATDFPATGSANGAQASDEMSSNPHESMGRSIGENMSRHFSQKLDKRFSTERLKALRAIT

A0A5A7VGL4 Retrotrans_gag domain-containing protein1.4e-0761.19Show/hide
Query:  RGRPRRVRQVATDFPATGSANGAQASDEMSSNPHESMGRSIGENMSRHFSQKLDKRFSTERLKALRA
        RGR R+VRQVA D  ATGS N AQASDE+SSNPH  +GR   ENMS H  + +D      RLKALRA
Subjt:  RGRPRRVRQVATDFPATGSANGAQASDEMSSNPHESMGRSIGENMSRHFSQKLDKRFSTERLKALRA

A0A5D3DTR2 Retrotrans_gag domain-containing protein3.9e-1061.11Show/hide
Query:  MELRGRPRRVRQVATDFPATGSANGAQASDEMSSNPHESMGRSIGENMSRHFSQKLDKRFSTERLKALRAIT
        M  RGR R+VRQV  D P T S N AQASDE+SSNPH S+G+   E M     QK+DKRFS ERLKAL A T
Subjt:  MELRGRPRRVRQVATDFPATGSANGAQASDEMSSNPHESMGRSIGENMSRHFSQKLDKRFSTERLKALRAIT

A0A5D3DZK7 Uncharacterized protein6.0e-1164.71Show/hide
Query:  RGRPRRVRQVATDFPATGSANGAQASDEMSSNPHESMGRSIGENMSRHFSQKLDKRFSTERLKALRAI
        RGRPR+VRQVATD PAT S N AQA  EMSSNPHE +GR   E M   F QKLDKRFS ER K +  +
Subjt:  RGRPRRVRQVATDFPATGSANGAQASDEMSSNPHESMGRSIGENMSRHFSQKLDKRFSTERLKALRAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTAAGAGGAAGGCCAAGGCGAGTTAGGCAAGTGGCAACAGATTTTCCAGCTACGGGAAGTGCCAATGGAGCGCAGGCATCTGACGAGATGTCTAGTAACCCACA
TGAATCAATGGGAAGAAGCATAGGGGAAAACATGTCCAGACACTTTTCTCAGAAGTTAGACAAAAGATTTAGCACCGAAAGGTTGAAGGCGTTGAGAGCAATAACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACTAAGAGGAAGGCCAAGGCGAGTTAGGCAAGTGGCAACAGATTTTCCAGCTACGGGAAGTGCCAATGGAGCGCAGGCATCTGACGAGATGTCTAGTAACCCACA
TGAATCAATGGGAAGAAGCATAGGGGAAAACATGTCCAGACACTTTTCTCAGAAGTTAGACAAAAGATTTAGCACCGAAAGGTTGAAGGCGTTGAGAGCAATAACCTGA
Protein sequenceShow/hide protein sequence
MELRGRPRRVRQVATDFPATGSANGAQASDEMSSNPHESMGRSIGENMSRHFSQKLDKRFSTERLKALRAIT