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IVF0013857 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013857
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionWD repeat protein
Genome locationchr03:18997168..19000904
RNA-Seq ExpressionIVF0013857
SyntenyIVF0013857
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140944.1 uncharacterized protein LOC101218374 [Cucumis sativus]1.03e-13396.35Show/hide
Query:  MDQSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
        MDQSE+EIREV+ETNSKSELQPLLET NPSSNSK+VKTKVPE+EIHL+RQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
Subjt:  MDQSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN

Query:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRT+DLLKKYGW
Subjt:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

XP_008456707.1 PREDICTED: uncharacterized protein LOC103496571 [Cucumis melo]2.25e-137100Show/hide
Query:  MDQSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
        MDQSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
Subjt:  MDQSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN

Query:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

XP_022990468.1 uncharacterized protein LOC111487320 [Cucurbita maxima]1.18e-12491.15Show/hide
Query:  QSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR
        QSE+EIRE++ET+S SELQPLL++QNPSSNS+TVKTKVPEVEIHLYRQGKGPIDVFKSSLGGW+QDQLEVR+ILDKYGFKSVFAFKPDSGRGVPIRFNPR
Subjt:  QSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR

Query:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLS--RDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        NGRSILTYRDGAEI+IDGEPKDSLIKPVTRI+F VAIITILIT LS  R+SQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLS--RDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

XP_023518857.1 uncharacterized protein LOC111782248 [Cucurbita pepo subsp. pepo]3.93e-12390.1Show/hide
Query:  QSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR
        QSE+EIRE++ET+S SELQPLL++ N SSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGW+QDQLEVR+ILDKYGFKSVFAFKPDSGRGVPIRFNPR
Subjt:  QSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR

Query:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLS--RDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        NGRSILTYRDGAEI+IDGEPKDSLIKPVTRI+F VAIITI+IT LS  R+SQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLS--RDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

XP_038884244.1 uncharacterized protein LOC120075142 [Benincasa hispida]3.22e-13093.75Show/hide
Query:  MDQSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
        MDQSE+EIREV++T+SKSELQPLLE+QNP+ NSK V+TKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVRDIL+KYGFKSVFAFKPDSGRGVPIRFN
Subjt:  MDQSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN

Query:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVA+ITILITFLSRDSQGWMKK NITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

TrEMBL top hitse value%identityAlignment
A0A0A0K9G4 Uncharacterized protein2.3e-10296.35Show/hide
Query:  MDQSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
        MDQSE+EIREV+ETNSKSELQPLLET NPSSNSK+VKTKVPE+EIHL+RQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
Subjt:  MDQSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN

Query:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRT+DLLKKYGW
Subjt:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

A0A1S3C3V7 uncharacterized protein LOC1034965713.8e-105100Show/hide
Query:  MDQSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
        MDQSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
Subjt:  MDQSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN

Query:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

A0A6J1BYH2 uncharacterized protein LOC1110067356.4e-9287.83Show/hide
Query:  QSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR
        Q+E+EIRE++ET S SE QPLL++QNPSS+SK VKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLE+R+ILDKYGFKS FAFKP++GRGVPIRFNPR
Subjt:  QSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR

Query:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYG
        NGRSILTYRDGAEI+IDGEPKDSLIKP+TRIIFGVAI+TILITFLSR+SQG MKKLNI+GNFPPWILACVVIVFTRSRKRTRDLLKK+G
Subjt:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYG

A0A6J1HAT7 uncharacterized protein LOC1114611104.4e-9389.58Show/hide
Query:  QSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR
        QSE+EIRE++ET+S SELQPLL++QNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGW+QDQLEVR+ILDKYGFKSVFAFKPDSGRGVPIRFNPR
Subjt:  QSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR

Query:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFL--SRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        NGRSILTYR GAEI+IDGEPKDSLIKPVT I+F VAIITI+IT L  SR SQGWMK LNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFL--SRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

A0A6J1JTD1 uncharacterized protein LOC1114873202.1e-9591.15Show/hide
Query:  QSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR
        QSE+EIRE++ET+S SELQPLL++QNPSSNS+TVKTKVPEVEIHLYRQGKGPIDVFKSSLGGW+QDQLEVR+ILDKYGFKSVFAFKPDSGRGVPIRFNPR
Subjt:  QSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR

Query:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFL--SRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        NGRSILTYRDGAEI+IDGEPKDSLIKPVTRI+F VAIITILIT L  SR+SQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFL--SRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G71780.1 unknown protein2.2e-6865.05Show/hide
Query:  REVQETNSKSELQPLLETQNPSS--NSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRS
        +E++ET       PLLE   P S   S T   KVPEVEIHLY+ GKGPIDVFKS+LGG++QDQLEVR IL+KYG K++FAF  + GR VPIRF+PRNGRS
Subjt:  REVQETNSKSELQPLLETQNPSS--NSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRS

Query:  ILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        +L YRDGA I+IDGEP+DSL+KP+TRII GV I+T+LITFL +D   W+K     G FPPW+LAC+VIVFTR+RKRTRD  KKYGW
Subjt:  ILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAGAGCGAGACCGAAATCCGAGAAGTCCAAGAAACCAACTCCAAATCGGAGTTGCAACCTCTTCTTGAGACCCAGAATCCCAGTTCCAACTCCAAAACTGTGAA
GACGAAGGTTCCGGAGGTTGAGATCCATCTTTATCGTCAGGGCAAAGGTCCGATCGATGTGTTTAAATCAAGCCTCGGTGGTTGGGATCAAGATCAGCTTGAGGTCCGAG
ATATTCTGGACAAATACGGATTCAAGTCCGTATTCGCCTTCAAACCTGACTCCGGTCGTGGCGTCCCTATTCGATTCAACCCTAGAAATGGCAGGTCTATACTGACTTAC
AGAGATGGAGCCGAAATTTTCATTGACGGAGAGCCTAAGGATTCCCTGATCAAACCGGTAACCAGGATCATTTTCGGCGTGGCAATTATAACTATTTTGATAACGTTTCT
CTCTCGAGACTCACAAGGGTGGATGAAGAAACTTAATATCACTGGGAACTTCCCTCCTTGGATTCTAGCTTGTGTCGTTATCGTTTTTACGCGCTCAAGGAAGAGAACTA
GGGACTTACTTAAAAAGTACGGTTGGTAA
mRNA sequenceShow/hide mRNA sequence
CTTGAGAACCGCCTTATTGTTTAAGTACTTCTTTATTTTGTTCTACTAGATGTCTGTCTGTGGTTGGTTGCACTAATAAAGTAATAACGATCTGTAGAAGGTCTCTTACC
CGAACAAATCCCCGAGTAGAAGTATCGAACAAATAAAGTTCCACAACCGACAACCGTACATCAAAACACAAGGCGCGAAATGGATCAGAGCGAGACCGAAATCCGAGAAG
TCCAAGAAACCAACTCCAAATCGGAGTTGCAACCTCTTCTTGAGACCCAGAATCCCAGTTCCAACTCCAAAACTGTGAAGACGAAGGTTCCGGAGGTTGAGATCCATCTT
TATCGTCAGGGCAAAGGTCCGATCGATGTGTTTAAATCAAGCCTCGGTGGTTGGGATCAAGATCAGCTTGAGGTCCGAGATATTCTGGACAAATACGGATTCAAGTCCGT
ATTCGCCTTCAAACCTGACTCCGGTCGTGGCGTCCCTATTCGATTCAACCCTAGAAATGGCAGGTCTATACTGACTTACAGAGATGGAGCCGAAATTTTCATTGACGGAG
AGCCTAAGGATTCCCTGATCAAACCGGTAACCAGGATCATTTTCGGCGTGGCAATTATAACTATTTTGATAACGTTTCTCTCTCGAGACTCACAAGGGTGGATGAAGAAA
CTTAATATCACTGGGAACTTCCCTCCTTGGATTCTAGCTTGTGTCGTTATCGTTTTTACGCGCTCAAGGAAGAGAACTAGGGACTTACTTAAAAAGTACGGTTGGTAATT
GTCTAGTCCTTCGTCTACTTTTGTTCCTTCAAAAAAGAGAAAAAAAATGTCATCCTCCAATAGAAAATGGAAAGCCATTAATCAATACGTTGATTCTAGGTTCTCAATTT
CGAACTTCCAAAAATAGGAGACAGAATATTGTACCGTGTTGCTAGCAAAAGCGAGGTCCATTGCTACCATAAATTCCCTGTCTTAATTTGTTCTTCGATATGTGTAGATA
AGCAGCCTGTGTTTGCTGGACTGAAATTTGTTTGAGTTTGAGCCATAGTTTTAACTTTTTGGGTGAAAGCTTTCATCACTTTGGGTTGCATAATTTGGATTTGCTTGTAT
AGCGCGTTTCTCATACGTACGATTGAAGTAAATTTAGATTCTGTTTTATGTTTTGTTTATAAATTCACTGCTGC
Protein sequenceShow/hide protein sequence
MDQSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTY
RDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW