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IVF0013858 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013858
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr10:5412895..5413062
RNA-Seq ExpressionIVF0013858
SyntenyIVF0013858
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032832.1 retrotransposon protein [Cucumis melo var. makuwa]4.95e-2789.09Show/hide
Query:  MTYCKDVDDVDEWDSTYATTTTSEDIHYIETTNEWSQWRDELAESMFTDWQLRNA
        MTYC+D+DDVDE DSTYATTT SEDIHYIE TNEWSQWRDELAESMFTD QLRNA
Subjt:  MTYCKDVDDVDEWDSTYATTTTSEDIHYIETTNEWSQWRDELAESMFTDWQLRNA
KAA0047370.1 retrotransposon protein [Cucumis melo var. makuwa]3.98e-2794.55Show/hide
Query:  MTYCKDVDDVDEWDSTYATTTTSEDIHYIETTNEWSQWRDELAESMFTDWQLRNA
        MTYCKDVDDVDE DSTYATT  SEDIHYIETTNEWSQWRDELAESMFTDWQLRNA
Subjt:  MTYCKDVDDVDEWDSTYATTTTSEDIHYIETTNEWSQWRDELAESMFTDWQLRNA
KAA0054051.1 retrotransposon protein [Cucumis melo var. makuwa]5.13e-2990.91Show/hide
Query:  MTYCKDVDDVDEWDSTYATTTTSEDIHYIETTNEWSQWRDELAESMFTDWQLRNA
        MTYC D+DDVDE DS YATTT SEDIHYIETTNEWSQWRDELAESMFTDWQLRNA
Subjt:  MTYCKDVDDVDEWDSTYATTTTSEDIHYIETTNEWSQWRDELAESMFTDWQLRNA
KAA0062210.1 retrotransposon protein [Cucumis melo var. makuwa]8.24e-31100Show/hide
Query:  MTYCKDVDDVDEWDSTYATTTTSEDIHYIETTNEWSQWRDELAESMFTDWQLRNA
        MTYCKDVDDVDEWDSTYATTTTSEDIHYIETTNEWSQWRDELAESMFTDWQLRNA
Subjt:  MTYCKDVDDVDEWDSTYATTTTSEDIHYIETTNEWSQWRDELAESMFTDWQLRNA
TYK14046.1 retrotransposon protein [Cucumis melo var. makuwa]3.98e-2794.55Show/hide
Query:  MTYCKDVDDVDEWDSTYATTTTSEDIHYIETTNEWSQWRDELAESMFTDWQLRNA
        MTYCKDVDDVDE DSTYATT  SEDIHYIETTNEWSQWRDELAESMFTDWQLRNA
Subjt:  MTYCKDVDDVDEWDSTYATTTTSEDIHYIETTNEWSQWRDELAESMFTDWQLRNA
TrEMBL top hitse value%identityAlignment
A0A5A7TW41 Retrotransposon protein2.9e-2194.55Show/hide
Query:  MTYCKDVDDVDEWDSTYATTTTSEDIHYIETTNEWSQWRDELAESMFTDWQLRNA
        MTYCKDVDDVDE DSTYATT  SEDIHYIETTNEWSQWRDELAESMFTDWQLRNA
Subjt:  MTYCKDVDDVDEWDSTYATTTTSEDIHYIETTNEWSQWRDELAESMFTDWQLRNA
A0A5A7V4J1 Retrotransposon protein4.7e-24100Show/hide
Query:  MTYCKDVDDVDEWDSTYATTTTSEDIHYIETTNEWSQWRDELAESMFTDWQLRNA
        MTYCKDVDDVDEWDSTYATTTTSEDIHYIETTNEWSQWRDELAESMFTDWQLRNA
Subjt:  MTYCKDVDDVDEWDSTYATTTTSEDIHYIETTNEWSQWRDELAESMFTDWQLRNA
A0A5A7VK86 Retrotransposon protein1.9e-2090.91Show/hide
Query:  MTYCKDVDDVDEWDSTYATTTTSEDIHYIETTNEWSQWRDELAESMFTDWQLRNA
        MTYC+DVDDVDE DSTYATTT SEDIHYIETTNEWSQWRDEL ESMFTDWQL NA
Subjt:  MTYCKDVDDVDEWDSTYATTTTSEDIHYIETTNEWSQWRDELAESMFTDWQLRNA
A0A5D3BDZ0 Retrotransposon protein1.4e-2090.91Show/hide
Query:  MTYCKDVDDVDEWDSTYATTTTSEDIHYIETTNEWSQWRDELAESMFTDWQLRNA
        MTYC D+DDVDE DS YATTT SEDIHYIETTNEWSQWRDELAESMFTDWQLRNA
Subjt:  MTYCKDVDDVDEWDSTYATTTTSEDIHYIETTNEWSQWRDELAESMFTDWQLRNA
A0A5D3CUG9 Retrotransposon protein2.9e-2194.55Show/hide
Query:  MTYCKDVDDVDEWDSTYATTTTSEDIHYIETTNEWSQWRDELAESMFTDWQLRNA
        MTYCKDVDDVDE DSTYATT  SEDIHYIETTNEWSQWRDELAESMFTDWQLRNA
Subjt:  MTYCKDVDDVDEWDSTYATTTTSEDIHYIETTNEWSQWRDELAESMFTDWQLRNA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGCAAGGACGTTGACGACGTGGACGAGTGGGACTCTACGTACGCGACAACCACCACTTCAGAAGACATTCACTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACGAACTAGCTGAATCGATGTTCACTGATTGGCAGTTGCGTAACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGCAAGGACGTTGACGACGTGGACGAGTGGGACTCTACGTACGCGACAACCACCACTTCAGAAGACATTCACTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACGAACTAGCTGAATCGATGTTCACTGATTGGCAGTTGCGTAACGCTTAG
Protein sequenceShow/hide protein sequence
MTYCKDVDDVDEWDSTYATTTTSEDIHYIETTNEWSQWRDELAESMFTDWQLRNA