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IVF0013862 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013862
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRNase H domain-containing protein
Genome locationchr08:10164917..10165147
RNA-Seq ExpressionIVF0013862
SyntenyIVF0013862
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050355.1 protein Ycf2-like [Cucumis melo var. makuwa]5.64e-1673.13Show/hide
Query:  DGRRRKRADGGCVRRVKNLKRRRR-TAWRWLHEGSRGRADGDGGTNGGERMETAASDDVGRRRRRRR
        DG+R KRAD G VRRVK  KRRRR TAWRWL EGSRGRADG G TNGGERMETAA   VGR R++++
Subjt:  DGRRRKRADGGCVRRVKNLKRRRR-TAWRWLHEGSRGRADGDGGTNGGERMETAASDDVGRRRRRRR
KAA0056205.1 uncharacterized protein E6C27_scaffold431G00330 [Cucumis melo var. makuwa]1.97e-1873.68Show/hide
Query:  DGRRRKRADGGCVRRVKNLKRRRR-TAWRWLHEGSRGRADGDGGTNGGERMETAASDDVGR-RRRRRRNGGGGVTR
        DGRRRKRAD GCVRRVK LKRRRR TAWRWL EG RGRADG G TN GERMETAA   VGR R+++R    GGV+R
Subjt:  DGRRRKRADGGCVRRVKNLKRRRR-TAWRWLHEGSRGRADGDGGTNGGERMETAASDDVGR-RRRRRRNGGGGVTR
TrEMBL top hitse value%identityAlignment
A0A5A7U9S5 Protein Ycf2-like3.4e-1268.57Show/hide
Query:  DGRRRKRADGGCVRRVKNLK-RRRRTAWRWLHEGSRGRADGDGGTNGGERMETAASDDVGRRRRRRRNGG
        DG+R KRAD G VRRVK  K RRRRTAWRWL EGSRGRADG G TNGGERMETAA     ++++  R GG
Subjt:  DGRRRKRADGGCVRRVKNLK-RRRRTAWRWLHEGSRGRADGDGGTNGGERMETAASDDVGRRRRRRRNGG
A0A5A7URF1 RNase H domain-containing protein1.6e-1473.68Show/hide
Query:  DGRRRKRADGGCVRRVKNLK-RRRRTAWRWLHEGSRGRADGDGGTNGGERMETAASDDVGR-RRRRRRNGGGGVTR
        DGRRRKRAD GCVRRVK LK RRRRTAWRWL EG RGRADG G TN GERMETAA   VGR R+++R    GGV+R
Subjt:  DGRRRKRADGGCVRRVKNLK-RRRRTAWRWLHEGSRGRADGDGGTNGGERMETAASDDVGR-RRRRRRNGGGGVTR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGCAGACGGCGCAAACGCGCGGATGGTGGCTGCGTTCGTCGGGTGAAGAATCTGAAGAGAAGGAGAAGAACAGCGTGGCGTTGGCTTCATGAAGGCAGTCGAGG
ACGCGCGGACGGAGATGGAGGCACGAATGGAGGAGAACGGATGGAGACGGCAGCGTCGGACGATGTAGGAAGAAGAAGAAGAAGGAGGCGGAACGGGGGGGGGGGTGTCA
CGCGCGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGGCAGACGGCGCAAACGCGCGGATGGTGGCTGCGTTCGTCGGGTGAAGAATCTGAAGAGAAGGAGAAGAACAGCGTGGCGTTGGCTTCATGAAGGCAGTCGAGG
ACGCGCGGACGGAGATGGAGGCACGAATGGAGGAGAACGGATGGAGACGGCAGCGTCGGACGATGTAGGAAGAAGAAGAAGAAGGAGGCGGAACGGGGGGGGGGGTGTCA
CGCGCGGCTAG
Protein sequenceShow/hide protein sequence
MDGRRRKRADGGCVRRVKNLKRRRRTAWRWLHEGSRGRADGDGGTNGGERMETAASDDVGRRRRRRRNGGGGVTRG