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IVF0013904 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013904
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUbiquitin domain-containing protein
Genome locationchr07:17440697..17443914
RNA-Seq ExpressionIVF0013904
SyntenyIVF0013904
Gene Ontology termsNA
InterPro domainsIPR032752 - DC-UbP/UBTD2, N-terminal domain
IPR038169 - DC-UbP/UBTD2, N-terminal domain superfamily
IPR039869 - Ubiquitin domain-containing protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137230.1 ubiquitin domain-containing protein 1 [Cucumis sativus]5.23e-7698.25Show/hide
Query:  MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYELP
        MGCAGSS TKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQ IVDSAGVIVQNADLTICYDERGAKYELP
Subjt:  MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDS
        NYVLSEPTNLIRDS
Subjt:  NYVLSEPTNLIRDS

XP_008451745.1 PREDICTED: ubiquitin domain-containing protein 2-like [Cucumis melo]1.51e-77100Show/hide
Query:  MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYELP
        MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYELP
Subjt:  MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDS
        NYVLSEPTNLIRDS
Subjt:  NYVLSEPTNLIRDS

XP_022931411.1 ubiquitin domain-containing protein 2-like [Cucurbita moschata]5.88e-7392.98Show/hide
Query:  MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYELP
        MGCAGSS T  DGSIKKIRKPKSWKHPQPITRSQL QLR+EFWDTAPHYGGRKEIWDALRAAAEAELSLAQ I+DSAGVI+QNADLTICYDERGAKYELP
Subjt:  MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDS
        NYVLSEPTNLIRDS
Subjt:  NYVLSEPTNLIRDS

XP_023552879.1 ubiquitin domain-containing protein 2-like [Cucurbita pepo subsp. pepo]6.88e-7292.11Show/hide
Query:  MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYELP
        MGCAGSS T  DGSIKKI KPKSWKHPQPITRSQL QLR+EFWDTAPHYGGRKEIWDALRAAAEAELSLAQ I+DSAGVI+QNADLTICYDERGAKYELP
Subjt:  MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDS
        NYVLSEPTNLIRDS
Subjt:  NYVLSEPTNLIRDS

XP_038882682.1 ubiquitin domain-containing protein 2-like [Benincasa hispida]1.44e-7394.74Show/hide
Query:  MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYELP
        MGCAGSS T  DGSIKKIRKPKSWKHPQPITRSQL QLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQ I+DSAGVIVQNADLTICYDERGAKYELP
Subjt:  MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDS
        NYVLSEPTNLIRDS
Subjt:  NYVLSEPTNLIRDS

TrEMBL top hitse value%identityAlignment
A0A0A0KVJ9 UBD domain-containing protein3.0e-5798.25Show/hide
Query:  MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYELP
        MGCAGSS TKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQ IVDSAGVIVQNADLTICYDERGAKYELP
Subjt:  MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDS
        NYVLSEPTNLIRDS
Subjt:  NYVLSEPTNLIRDS

A0A1S4DZK7 ubiquitin domain-containing protein 2-like2.1e-58100Show/hide
Query:  MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYELP
        MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYELP
Subjt:  MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDS
        NYVLSEPTNLIRDS
Subjt:  NYVLSEPTNLIRDS

A0A6J1ETK8 ubiquitin domain-containing protein 2-like6.3e-5592.98Show/hide
Query:  MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYELP
        MGCAGSS T  DGSIKKIRKPKSWKHPQPITRSQL QLR+EFWDTAPHYGGRKEIWDALRAAAEAELSLAQ I+DSAGVI+QNADLTICYDERGAKYELP
Subjt:  MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDS
        NYVLSEPTNLIRDS
Subjt:  NYVLSEPTNLIRDS

A0A6J1J306 ubiquitin domain-containing protein 2-like2.6e-5390.35Show/hide
Query:  MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYELP
        MGCAGSS T  +GSIKKIRKPKSWKHPQPITR QL QLR+EFWDTAPHYGGRKEIWDALRAAAEAELSLAQ I+DSAGVI+QNADLTICYDERG KYELP
Subjt:  MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDS
        NYVLSEPTNLIRDS
Subjt:  NYVLSEPTNLIRDS

A0A6J1J725 ubiquitin domain-containing protein 1-like isoform X24.5e-5390.35Show/hide
Query:  MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYELP
        MGC GSS T  DGS KKIRKPK WKHPQPITRSQLTQLRDEFWDTAPHYGGR EIWDALRAAAEAELSLAQ I+DSAGVIVQNADLT+CYDERGAKYELP
Subjt:  MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDS
         YVLSEPTNLIRDS
Subjt:  NYVLSEPTNLIRDS

SwissProt top hitse value%identityAlignment
Q4V8W7 Ubiquitin domain-containing protein 14.0e-2250.46Show/hide
Query:  KADGSIKKIRKPK-SWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQVIVDSAGVIVQNADLTICYDERGAKYELPNYVL
        K  G  + ++K K  WK   P+T  QL   RDEFWDTAP + GRKEIWDAL+AAA A    +  LAQ IVD A + + +  LT CYDE G +Y+LP Y L
Subjt:  KADGSIKKIRKPK-SWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQVIVDSAGVIVQNADLTICYDERGAKYELPNYVL

Query:  SEPTNLIRD
        + P NLI +
Subjt:  SEPTNLIRD

Q5EAE3 Ubiquitin domain-containing protein 28.8e-2252.48Show/hide
Query:  KIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQVIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIR
        K  KPK WK   P+T  QL   RDEFWDTAP + GRKEIWDAL+AAA A    +  LAQ I+D A + + +  LT CYDE G +Y+LP Y L+ P N+I 
Subjt:  KIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQVIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIR

Query:  D
        +
Subjt:  D

Q6DG43 Ubiquitin domain-containing protein 21.8e-2253.47Show/hide
Query:  KIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQVIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIR
        K  KPK WK   P+T  QL   RDEFWDTAP + GRKEIWDAL+AAA+A    +  LAQ I+D A + + +  LT CYDE G +Y+LP Y LS P N+I 
Subjt:  KIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQVIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIR

Query:  D
        +
Subjt:  D

Q6PGH0 Ubiquitin domain-containing protein 28.8e-2252.48Show/hide
Query:  KIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQVIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIR
        K  KPK WK   P+T  QL   RDEFWDTAP + GRKEIWDAL+AAA A    +  LAQ I+D A + + +  LT CYDE G +Y+LP Y L+ P N+I 
Subjt:  KIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQVIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIR

Query:  D
        +
Subjt:  D

Q8WUN7 Ubiquitin domain-containing protein 28.8e-2252.48Show/hide
Query:  KIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQVIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIR
        K  KPK WK   P+T  QL   RDEFWDTAP + GRKEIWDAL+AAA A    +  LAQ I+D A + + +  LT CYDE G +Y+LP Y L+ P N+I 
Subjt:  KIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQVIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIR

Query:  D
        +
Subjt:  D

Arabidopsis top hitse value%identityAlignment
AT1G16960.1 Ubiquitin domain-containing protein2.9e-4474.11Show/hide
Query:  MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEA-ELSLAQVIVDSAGVIVQNADLTICYDERGAKYEL
        MGC+ SS T A+G  +KIR+PK+WKHPQPI+R +LTQ+R+EFWDTAPHYGG+KEIWDALRAAAE  +LSLAQ I++SAGVIVQN DLTICYDE+G+KYEL
Subjt:  MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEA-ELSLAQVIVDSAGVIVQNADLTICYDERGAKYEL

Query:  PNYVLSEPTNLI
        P YVL +P+NLI
Subjt:  PNYVLSEPTNLI

AT1G53400.1 Ubiquitin domain-containing protein2.4e-5182.73Show/hide
Query:  MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYELP
        MGCAGS+ ++ADGS+KKIRKPK WKH QPIT+++L +LR+EFWDTAPHYGGRKEIWDALRAAAEA++SLAQ IVDSAGVIVQN DLT+CYDERGAKYELP
Subjt:  MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNL
         YVLSEPTNL
Subjt:  NYVLSEPTNL

AT5G45740.1 Ubiquitin domain-containing protein4.5e-4572.17Show/hide
Query:  MGCAGSSLTKADGSI--KKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYE
        MGC GSS  + +G    KKI KPK W H +PITR+QLT +R+EFWDT+PHYGG++EIW+ALRAAAEA+L LAQ IVDSAGVIVQN DLT+C+DERGA+YE
Subjt:  MGCAGSSLTKADGSI--KKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYE

Query:  LPNYVLSEPTNLIRD
        LP YVLSEPTNLIR+
Subjt:  LPNYVLSEPTNLIRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTGTGCTGGATCGTCGCTGACCAAAGCAGACGGATCCATAAAGAAAATACGGAAGCCAAAATCTTGGAAGCATCCTCAGCCAATTACAAGGTCTCAGCTCACACA
ACTACGGGATGAATTCTGGGACACTGCACCTCACTATGGTGGCCGGAAAGAGATTTGGGACGCACTACGAGCAGCTGCCGAAGCCGAGCTTTCTCTTGCGCAAGTAATTG
TTGACAGTGCAGGGGTCATCGTTCAAAATGCAGATTTGACAATCTGTTACGATGAGAGAGGCGCAAAATATGAACTCCCCAACTATGTTTTGAGTGAGCCGACCAACTTA
ATTCGTGACAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTGTGCTGGATCGTCGCTGACCAAAGCAGACGGATCCATAAAGAAAATACGGAAGCCAAAATCTTGGAAGCATCCTCAGCCAATTACAAGGTCTCAGCTCACACA
ACTACGGGATGAATTCTGGGACACTGCACCTCACTATGGTGGCCGGAAAGAGATTTGGGACGCACTACGAGCAGCTGCCGAAGCCGAGCTTTCTCTTGCGCAAGTAATTG
TTGACAGTGCAGGGGTCATCGTTCAAAATGCAGATTTGACAATCTGTTACGATGAGAGAGGCGCAAAATATGAACTCCCCAACTATGTTTTGAGTGAGCCGACCAACTTA
ATTCGTGACAGTTAA
Protein sequenceShow/hide protein sequence
MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNL
IRDS