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IVF0013929 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013929
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr01:17434267..17434434
RNA-Seq ExpressionIVF0013929
SyntenyIVF0013929
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036563.1 retrotransposon protein [Cucumis melo var. makuwa]1.15e-30100Show/hide
Query:  MTYCDDVDDGDEGDSMYATTTTSEDIQYIETTNEWSQWRDELVESMFTDWQLRNA
        MTYCDDVDDGDEGDSMYATTTTSEDIQYIETTNEWSQWRDELVESMFTDWQLRNA
Subjt:  MTYCDDVDDGDEGDSMYATTTTSEDIQYIETTNEWSQWRDELVESMFTDWQLRNA
KAA0054051.1 retrotransposon protein [Cucumis melo var. makuwa]3.61e-2989.09Show/hide
Query:  MTYCDDVDDGDEGDSMYATTTTSEDIQYIETTNEWSQWRDELVESMFTDWQLRNA
        MTYCDD+DD DEGDS YATTT SEDI YIETTNEWSQWRDEL ESMFTDWQLRNA
Subjt:  MTYCDDVDDGDEGDSMYATTTTSEDIQYIETTNEWSQWRDELVESMFTDWQLRNA
KAA0062284.1 retrotransposon protein [Cucumis melo var. makuwa]2.16e-2887.27Show/hide
Query:  MTYCDDVDDGDEGDSMYATTTTSEDIQYIETTNEWSQWRDELVESMFTDWQLRNA
        MTYCDD+DD DEGDS YATTT SEDIQYIETTNEWSQWRD+L ESMFT+WQLRNA
Subjt:  MTYCDDVDDGDEGDSMYATTTTSEDIQYIETTNEWSQWRDELVESMFTDWQLRNA
TYK05336.1 retrotransposon protein [Cucumis melo var. makuwa]4.37e-2887.27Show/hide
Query:  MTYCDDVDDGDEGDSMYATTTTSEDIQYIETTNEWSQWRDELVESMFTDWQLRNA
        MTYC+DVDD DEGDS YATTT SEDIQYIETTNEWSQWRD+L ESMFTDWQLRN+
Subjt:  MTYCDDVDDGDEGDSMYATTTTSEDIQYIETTNEWSQWRDELVESMFTDWQLRNA
TYK22655.1 retrotransposon protein [Cucumis melo var. makuwa]9.15e-3296.36Show/hide
Query:  MTYCDDVDDGDEGDSMYATTTTSEDIQYIETTNEWSQWRDELVESMFTDWQLRNA
        MTYCDDVDDGDE DSMYATTT SEDIQYIETTNEWSQWRDELVESMFTDWQLRNA
Subjt:  MTYCDDVDDGDEGDSMYATTTTSEDIQYIETTNEWSQWRDELVESMFTDWQLRNA
TrEMBL top hitse value%identityAlignment
A0A5A7SZ61 Retrotransposon protein5.4e-2089.09Show/hide
Query:  MTYCDDVDDGDEGDSMYATTTTSEDIQYIETTNEWSQWRDELVESMFTDWQLRNA
        MTYCDDV+D DEGDS YATTT SEDIQYIETTNEWSQWRD+LVESMFT+WQLRNA
Subjt:  MTYCDDVDDGDEGDSMYATTTTSEDIQYIETTNEWSQWRDELVESMFTDWQLRNA
A0A5A7T0Z8 Retrotransposon protein1.8e-23100Show/hide
Query:  MTYCDDVDDGDEGDSMYATTTTSEDIQYIETTNEWSQWRDELVESMFTDWQLRNA
        MTYCDDVDDGDEGDSMYATTTTSEDIQYIETTNEWSQWRDELVESMFTDWQLRNA
Subjt:  MTYCDDVDDGDEGDSMYATTTTSEDIQYIETTNEWSQWRDELVESMFTDWQLRNA
A0A5A7VL61 Retrotransposon protein5.4e-2089.09Show/hide
Query:  MTYCDDVDDGDEGDSMYATTTTSEDIQYIETTNEWSQWRDELVESMFTDWQLRNA
        MTYCDDV+D DEGDS YATTTTSEDIQYIETTNEWSQW D+L ESMFTDWQLRNA
Subjt:  MTYCDDVDDGDEGDSMYATTTTSEDIQYIETTNEWSQWRDELVESMFTDWQLRNA
A0A5D3BDZ0 Retrotransposon protein5.4e-2089.09Show/hide
Query:  MTYCDDVDDGDEGDSMYATTTTSEDIQYIETTNEWSQWRDELVESMFTDWQLRNA
        MTYCDD+DD DEGDS YATTT SEDI YIETTNEWSQWRDEL ESMFTDWQLRNA
Subjt:  MTYCDDVDDGDEGDSMYATTTTSEDIQYIETTNEWSQWRDELVESMFTDWQLRNA
A0A5D3DGG5 Retrotransposon protein5.8e-2296.36Show/hide
Query:  MTYCDDVDDGDEGDSMYATTTTSEDIQYIETTNEWSQWRDELVESMFTDWQLRNA
        MTYCDDVDDGDE DSMYATTT SEDIQYIETTNEWSQWRDELVESMFTDWQLRNA
Subjt:  MTYCDDVDDGDEGDSMYATTTTSEDIQYIETTNEWSQWRDELVESMFTDWQLRNA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGCGACGACGTTGACGATGGGGACGAGGGAGACTCTATGTACGCGACGACCACCACTTCAGAAGACATTCAGTATATTGAGACGACAAACGAGTGGTCTCA
GTGGCGCGACGAACTAGTCGAATCGATGTTCACTGATTGGCAATTGCGTAATGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGCGACGACGTTGACGATGGGGACGAGGGAGACTCTATGTACGCGACGACCACCACTTCAGAAGACATTCAGTATATTGAGACGACAAACGAGTGGTCTCA
GTGGCGCGACGAACTAGTCGAATCGATGTTCACTGATTGGCAATTGCGTAATGCTTAG
Protein sequenceShow/hide protein sequence
MTYCDDVDDGDEGDSMYATTTTSEDIQYIETTNEWSQWRDELVESMFTDWQLRNA