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IVF0013947 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013947
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionS-protein homolog
Genome locationchr04:11442658..11442843
RNA-Seq ExpressionIVF0013947
SyntenyIVF0013947
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646230.1 hypothetical protein Csa_023815 [Cucumis sativus]9.13e-1146.3Show/hide
Query:  HVSLEVFWPESASNPYLAYRCSDNV-CYWSARNDGIYIYNVPEHKFDLHAKWLP
        +VS E FWPES  NP+L +RC   + C W+A++DGIY+ N+P +  +   KW+P
Subjt:  HVSLEVFWPESASNPYLAYRCSDNV-CYWSARNDGIYIYNVPEHKFDLHAKWLP
KAE8650840.1 hypothetical protein Csa_017632 [Cucumis sativus]2.12e-3283.05Show/hide
Query:  MTNGQNHVSLEVFWPESASNPYLAYRCSDNVCYWSARNDGIYIYNVPEHKFDLHAKWLP
        M+N  NHVSLEVFWPE+AS PYL+YRC DNVCYWSARNDGIYIYNVPE+KF+LH KWLP
Subjt:  MTNGQNHVSLEVFWPESASNPYLAYRCSDNVCYWSARNDGIYIYNVPEHKFDLHAKWLP
KGN60342.2 hypothetical protein Csa_002569, partial [Cucumis sativus]4.14e-1146.67Show/hide
Query:  MTNGQNHVSLEVFWPESASNPYLAYRCSDNVCYWSARNDGIYIYNVPEHKFDLHAKWLPG
        M N ++H S  VFWPE +   +LA+RC    C WSAR+DGIY+   P + F+L   W PG
Subjt:  MTNGQNHVSLEVFWPESASNPYLAYRCSDNVCYWSARNDGIYIYNVPEHKFDLHAKWLPG
XP_004136434.3 S-protein homolog 1-like [Cucumis sativus]3.38e-1146.67Show/hide
Query:  MTNGQNHVSLEVFWPESASNPYLAYRCSDNVCYWSARNDGIYIYNVPEHKFDLHAKWLPG
        M N ++H S  VFWPE +   +LA+RC    C WSAR+DGIY+   P + F+L   W PG
Subjt:  MTNGQNHVSLEVFWPESASNPYLAYRCSDNVCYWSARNDGIYIYNVPEHKFDLHAKWLPG
XP_009372346.1 PREDICTED: uncharacterized protein LOC103961515 [Pyrus x bretschneideri]1.13e-1145Show/hide
Query:  MTNGQNHVSLEVFWPESASNPYLAYRCSDNVCYWSARNDGIYIYNVPEHKFDLHAKWLPG
        M N   H S +VFWPES ++ +L YRC+   C+W A+ DGIY+  +PE + +   KW PG
Subjt:  MTNGQNHVSLEVFWPESASNPYLAYRCSDNVCYWSARNDGIYIYNVPEHKFDLHAKWLPG
TrEMBL top hitse value%identityAlignment
A0A0A0L8P9 Uncharacterized protein4.7e-2583.33Show/hide
Query:  MTNGQNHVSLEVFWPESASNPYLAYRCSDNVCYWSARNDGIYIYNVPEHKFDLHAKWLPG
        M+N  NHVSLEVFWPE+AS PYL+YRC DNVCYWSARNDGIYIYNVPE+KF+LH KWLPG
Subjt:  MTNGQNHVSLEVFWPESASNPYLAYRCSDNVCYWSARNDGIYIYNVPEHKFDLHAKWLPG
A0A251N105 S-protein homolog4.5e-0744.07Show/hide
Query:  NGQNHVSLEVFWPESAS-NPYLAYRCSDNVCYWSARNDGIYIYNVPEHKFDLHAKWLPG
        N   H + +VFW E  S + +L YRC+   C+W A++DGIYI N PE + +L  +W PG
Subjt:  NGQNHVSLEVFWPESAS-NPYLAYRCSDNVCYWSARNDGIYIYNVPEHKFDLHAKWLPG
A0A5E4EKH7 S-protein homolog4.5e-0744.07Show/hide
Query:  NGQNHVSLEVFWPESAS-NPYLAYRCSDNVCYWSARNDGIYIYNVPEHKFDLHAKWLPG
        N   H + +VFW E  S + +L YRC+   C+W A++DGIYI N PE + +L  +W PG
Subjt:  NGQNHVSLEVFWPESAS-NPYLAYRCSDNVCYWSARNDGIYIYNVPEHKFDLHAKWLPG
A0A6J5Y6Z2 S-protein homolog7.6e-0745.61Show/hide
Query:  MTNGQNHVSLEVFWPESASNPYLAYRCSDNVCYWSARNDGIYIYNVPEHKFDLHAKW
        M+ GQNH +L+VFW E   + +L YRC+   C W A++DGIYI  +PE++ +   KW
Subjt:  MTNGQNHVSLEVFWPESASNPYLAYRCSDNVCYWSARNDGIYIYNVPEHKFDLHAKW
M5VN50 S-protein homolog4.5e-0744.07Show/hide
Query:  NGQNHVSLEVFWPESAS-NPYLAYRCSDNVCYWSARNDGIYIYNVPEHKFDLHAKWLPG
        N   H + +VFW E  S + +L YRC+   C+W A++DGIYI N PE + +L  +W PG
Subjt:  NGQNHVSLEVFWPESAS-NPYLAYRCSDNVCYWSARNDGIYIYNVPEHKFDLHAKWLPG
SwissProt top hitse value%identityAlignment
F4JLS0 S-protein homolog 17.6e-0431.67Show/hide
Query:  MTNGQNHVSLEVFWPESASNPYLAYRCSDNVCYWSARNDGIYIYNVPEHKFDLHAKWLPG
        M     H+++ VFW     +  L +RC    C W+A+ DG+Y++N    +  L  KW  G
Subjt:  MTNGQNHVSLEVFWPESASNPYLAYRCSDNVCYWSARNDGIYIYNVPEHKFDLHAKWLPG
Q2HQ46 S-protein homolog 741.2e-0433.33Show/hide
Query:  MTNGQNHVSLEVFWPESASNPYLAYRCSDNVCYWSARNDGIYIYNVPEHKFDLHAKWLPG
        M+    H++++VFW     +  L +RC    C W+A+NDG+Y++N    +  L  KW  G
Subjt:  MTNGQNHVSLEVFWPESASNPYLAYRCSDNVCYWSARNDGIYIYNVPEHKFDLHAKWLPG
Arabidopsis top hitse value%identityAlignment
AT4G16295.1 S-protein homologue 15.4e-0531.67Show/hide
Query:  MTNGQNHVSLEVFWPESASNPYLAYRCSDNVCYWSARNDGIYIYNVPEHKFDLHAKWLPG
        M     H+++ VFW     +  L +RC    C W+A+ DG+Y++N    +  L  KW  G
Subjt:  MTNGQNHVSLEVFWPESASNPYLAYRCSDNVCYWSARNDGIYIYNVPEHKFDLHAKWLPG
AT4G29035.1 Plant self-incompatibility protein S1 family8.3e-0633.33Show/hide
Query:  MTNGQNHVSLEVFWPESASNPYLAYRCSDNVCYWSARNDGIYIYNVPEHKFDLHAKWLPG
        M+    H++++VFW     +  L +RC    C W+A+NDG+Y++N    +  L  KW  G
Subjt:  MTNGQNHVSLEVFWPESASNPYLAYRCSDNVCYWSARNDGIYIYNVPEHKFDLHAKWLPG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAACGGTCAAAATCATGTGTCATTAGAAGTGTTTTGGCCAGAATCAGCATCTAACCCCTATCTTGCTTATAGATGCAGTGATAATGTGTGCTATTGGTCAGCACG
AAACGATGGAATTTACATCTATAATGTTCCTGAACATAAGTTTGATCTTCACGCTAAATGGTTGCCTGGTCCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACCAACGGTCAAAATCATGTGTCATTAGAAGTGTTTTGGCCAGAATCAGCATCTAACCCCTATCTTGCTTATAGATGCAGTGATAATGTGTGCTATTGGTCAGCACG
AAACGATGGAATTTACATCTATAATGTTCCTGAACATAAGTTTGATCTTCACGCTAAATGGTTGCCTGGTCCGTAG
Protein sequenceShow/hide protein sequence
MTNGQNHVSLEVFWPESASNPYLAYRCSDNVCYWSARNDGIYIYNVPEHKFDLHAKWLPGP