; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0013955 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013955
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionU-box domain-containing protein 4-like
Genome locationchr11:17432613..17432849
RNA-Seq ExpressionIVF0013955
SyntenyIVF0013955
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
InterPro domainsIPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038128.1 U-box domain-containing protein 4 [Cucumis melo var. makuwa]3.82e-2492.59Show/hide
Query:  LAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLV
        LAGIQEGKDAI+EEGGIVAL+EAIEDGSVK KEFAVLTLLQLCVESVRN+GLLV
Subjt:  LAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLV

KAA0048788.1 tetraspanin-8-like [Cucumis melo var. makuwa]1.93e-2586.44Show/hide
Query:  MLLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLV
        ++LSS AGIQEGKDA++EEGGI +L+EAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLV
Subjt:  MLLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLV

TYK04963.1 U-box domain-containing protein 2 [Cucumis melo var. makuwa]3.64e-4497.37Show/hide
Query:  LSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLVRWNSPFSCTFSYWKRSSKA
        L  LAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLVRWNSPFSCTFSYWKRSSKA
Subjt:  LSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLVRWNSPFSCTFSYWKRSSKA

TYK08307.1 U-box domain-containing protein 3-like [Cucumis melo var. makuwa]2.03e-2488.14Show/hide
Query:  MLLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLV
        MLLSSLAGIQEGKDAI+EEGGI AL+EAIEDG VK KEFAVLTLLQLCVESVR+ GLLV
Subjt:  MLLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLV

XP_008467070.1 PREDICTED: U-box domain-containing protein 3-like [Cucumis melo]1.58e-2488.14Show/hide
Query:  MLLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLV
        MLLSSLAGIQEGKDAI+EEGGI AL+EAIEDG VK KEFAVLTLLQLCVESVR+ GLLV
Subjt:  MLLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLV

TrEMBL top hitse value%identityAlignment
A0A5A7U0Q3 Tetraspanin-8-like6.5e-1986.44Show/hide
Query:  MLLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLV
        ++LSS AGIQEGKDA++EEGGI +L+EAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLV
Subjt:  MLLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLV

A0A5D3BYX7 U-box domain-containing protein 21.0e-3297.37Show/hide
Query:  LSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLVRWNSPFSCTFSYWKRSSKA
        L  LAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLVRWNSPFSCTFSYWKRSSKA
Subjt:  LSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLVRWNSPFSCTFSYWKRSSKA

A0A5D3CRG4 U-box domain-containing protein 41.4e-1889.83Show/hide
Query:  MLLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLV
        ++LSSLAGIQEGKDAI+EEGGI AL+EAIEDGSVK KEFAVLTLLQLCVESVRNRGLLV
Subjt:  MLLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLV

A0A6J1BVC8 U-box domain-containing protein 48.5e-1988.33Show/hide
Query:  MLLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLVR
        ++LSSLAGIQEGKD+I+EEGGI AL+EAIEDGSVK KEFAVLTLLQLCVESVRNRGLLVR
Subjt:  MLLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLVR

A0A6J1EFA6 U-box domain-containing protein 4-like3.8e-1990Show/hide
Query:  MLLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLVR
        ++LSSLAGIQEGKDAI+EEGGI AL+EAIEDGSVK KEFAVLTLLQLCVESVRNRGLLVR
Subjt:  MLLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLVR

SwissProt top hitse value%identityAlignment
O22193 U-box domain-containing protein 42.0e-0450Show/hide
Query:  LLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVR
        +L++LA I EG++AI +EGGI  L+E +E GS + KE A   LLQL   S R
Subjt:  LLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVR

Q5XEZ8 U-box domain-containing protein 26.1e-0652.94Show/hide
Query:  MLLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVES
        ++L++LA ++EGK AI EEGGI  L+E +E GS + KE A   LLQLC  S
Subjt:  MLLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVES

Q8GWV5 U-box domain-containing protein 36.7e-0548Show/hide
Query:  LLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVES
        LL++L+ + EG+ AI+ EGGI  L+E ++ GS + KE A   LLQLC+ S
Subjt:  LLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVES

Arabidopsis top hitse value%identityAlignment
AT3G01400.1 ARM repeat superfamily protein1.1e-0747.46Show/hide
Query:  LLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLVR
        ++S L  + E K AI+EEGG+  L+E +E G+ + KE AV  LLQLC ESV  R ++ R
Subjt:  LLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLVR

AT3G54790.1 ARM repeat superfamily protein4.8e-0648Show/hide
Query:  LLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVES
        LL++L+ + EG+ AI+ EGGI  L+E ++ GS + KE A   LLQLC+ S
Subjt:  LLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVES

AT4G16490.1 ARM repeat superfamily protein1.3e-1978.33Show/hide
Query:  MLLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLVR
        ++LSSLA I +GK+AI+EEGGI AL+EAIEDGSVK KEFA+LTLLQLC +SVRNRGLLVR
Subjt:  MLLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLVR

AT5G58680.1 ARM repeat superfamily protein1.6e-0642.37Show/hide
Query:  LLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLVR
        +++ L    E K A++EEGG+  L+E +E G+ + KE +V  LLQLC ESV  R ++ R
Subjt:  LLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLVR

AT5G67340.1 ARM repeat superfamily protein4.3e-0752.94Show/hide
Query:  MLLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVES
        ++L++LA ++EGK AI EEGGI  L+E +E GS + KE A   LLQLC  S
Subjt:  MLLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCTGAGTAGCCTGGCTGGGATTCAAGAGGGAAAGGATGCGATTATGGAAGAGGGTGGAATTGTTGCGCTTCTAGAAGCAATTGAAGATGGGTCGGTGAAATGGAA
AGAATTTGCAGTGTTGACACTCTTGCAATTGTGTGTTGAGAGTGTGAGAAATCGAGGGTTACTCGTCAGGTGGAATTCCCCCTTTAGTTGCACTTTCTCATACTGGAAGC
GTTCGAGCAAAGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCTGAGTAGCCTGGCTGGGATTCAAGAGGGAAAGGATGCGATTATGGAAGAGGGTGGAATTGTTGCGCTTCTAGAAGCAATTGAAGATGGGTCGGTGAAATGGAA
AGAATTTGCAGTGTTGACACTCTTGCAATTGTGTGTTGAGAGTGTGAGAAATCGAGGGTTACTCGTCAGGTGGAATTCCCCCTTTAGTTGCACTTTCTCATACTGGAAGC
GTTCGAGCAAAGCATAA
Protein sequenceShow/hide protein sequence
MLLSSLAGIQEGKDAIMEEGGIVALLEAIEDGSVKWKEFAVLTLLQLCVESVRNRGLLVRWNSPFSCTFSYWKRSSKA