CuGenDBv2

Gene ID	IVF0013967
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
Genome location	chr06:21539716..21544936
RNA-Seq Expression	IVF0013967
Synteny	IVF0013967
Gene Ontology terms	GO:0032981 - mitochondrial respiratory chain complex I assembly (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0070469 - respirasome (cellular component)
InterPro domains	IPR007763 - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0033972.1 NDUFA12 domain-containing protein [Cucumis melo var. makuwa]

1.71e-111

100

Show/hide

Query:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
        MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER

Query:  NSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE
        NSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE
Subjt:  NSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE

XP_004152928.1 uncharacterized protein LOC101214441 isoform X2 [Cucumis sativus]

1.50e-105

95.71

Show/hide

Query:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
        MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWICWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER

Query:  NSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE
        NSKEG LRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRD+LRNSNEKE  QEKPIPE
Subjt:  NSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE

XP_031738721.1 uncharacterized protein LOC101214441 isoform X1 [Cucumis sativus]

3.34e-105

95.71

Show/hide

Query:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
        MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWICWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER

Query:  NSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE
        NSKEG LRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRD+LRNSNEKE  QEKPIPE
Subjt:  NSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE

XP_038903173.1 uncharacterized protein LOC120089839 isoform X1 [Benincasa hispida]

5.50e-105

92.9

Show/hide

Query:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
        MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER

Query:  NSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPEYFFFFF
        NSKEG LRKIISTGQV GPDLKSFIRQ PTGSEGAQDVEGL TRD+LRNSNEKE V+EKPIP+   F F
Subjt:  NSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPEYFFFFF

XP_038903174.1 uncharacterized protein LOC120089839 isoform X2 [Benincasa hispida]

2.14e-105

95.71

Show/hide

Query:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
        MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER

Query:  NSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE
        NSKEG LRKIISTGQV GPDLKSFIRQ PTGSEGAQDVEGL TRD+LRNSNEKE V+EKPIPE
Subjt:  NSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L526 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

1.3e-81

95.71

Show/hide

Query:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
        MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWICWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER

Query:  NSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE
        NSKEG LRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRD+LRNSNEKE  QEKPIPE
Subjt:  NSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE

A0A5A7SS01 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

3.9e-86

100

Show/hide

Query:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
        MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER

Query:  NSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE
        NSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE
Subjt:  NSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE

A0A6J1DNE9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

1.8e-70

82.82

Show/hide

Query:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
        MSKLFGKIA FFS+RT+ GVDK+GN+YFF KEEIDG+MKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNV LLKK+EMER
Subjt:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER

Query:  NSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE
        NS+EG LRK+IS  QV GPDL SFIRQ PTGSEGAQD EG   R++ RNS EKE V+EKPIPE
Subjt:  NSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE

A0A6J1JSL7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

1.5e-69

84.05

Show/hide

Query:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
        MSKLF KIAGFF++RTL+GVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER

Query:  NSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE
         SKE  LRK++ST    GP+LKSFIRQ PTGSEGAQD EG   +D+LRNS E E  +EKPIPE
Subjt:  NSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE

A0A6J1JVV8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

3.0e-70

84.66

Show/hide

Query:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
        MSKLF KIAGFF++RTL+GVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER

Query:  NSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE
         SKE  LRK++ST  V GP+LKSFIRQ PTGSEGAQD EG   +D+LRNS E E  +EKPIPE
Subjt:  NSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPE

SwissProt top hits

e value

%identity

Alignment

Q54MV7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

7.3e-05

44.07

Show/hide

Query:  TLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKG--EDDPTSIPVEWICWLNGQRKKAPT
        TLVGVDK GNRY+  ++EI G     RWV +     +DPT+IP E+  W++    K P+
Subjt:  TLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKG--EDDPTSIPVEWICWLNGQRKKAPT

Arabidopsis top hits

e value

%identity

Alignment

AT4G26965.1 NADH:ubiquinone oxidoreductase, 17.2kDa subunit

1.6e-47

59.63

Show/hide

Query:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
        MS+L+ + AG FS+++ +GVDK GN+YF   EEIDG +KEKRWV F+ E+DPTSIPVEWICWLNGQRK+APTPEEM+ELEARRERV+ NVALLKKEE E+
Subjt:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER

Query:  NSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLR-NSNEKEPVQEKP
         ++ G  RK I+ G+V GPDL SF+RQ P  S+G +  E     D  R   +E E V  +P
Subjt:  NSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLR-NSNEKEPVQEKP

AT4G26965.2 NADH:ubiquinone oxidoreductase, 17.2kDa subunit

9.1e-35

62.1

Show/hide

Query:  MKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQD
        MKEKRWV F+ E+DPTSIPVEWICWLNGQRK+APTPEEM+ELEARRERV+ NVALLKKEE E+ ++ G  RK I+ G+V GPDL SF+RQ P  S+G + 
Subjt:  MKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQD

Query:  VEGLPTRDTLR-NSNEKEPVQEKP
         E     D  R   +E E V  +P
Subjt:  VEGLPTRDTLR-NSNEKEPVQEKP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCGAAACTTTTTGGGAAAATTGCCGGTTTCTTCAGCAATAGAACTCTGGTGGGAGTGGACAAAGCGGGAAACAGGTACTTCTTCGTAAAAGAAGAAATCGATGGTAT
AATGAAAGAGAAGAGATGGGTGGTATTTAAGGGTGAGGATGATCCAACGTCAATTCCAGTGGAATGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAG
AGGAAATGATGGAACTAGAAGCTAGGCGTGAACGTGTACGACAAAATGTTGCTCTTCTCAAGAAAGAAGAGATGGAAAGAAACTCTAAAGAAGGCAAATTACGGAAAATC
ATCAGCACTGGTCAAGTTATGGGTCCTGACTTGAAAAGCTTTATCCGACAGGTCCCAACTGGTTCAGAAGGTGCCCAAGATGTGGAAGGATTGCCTACAAGAGATACCCT
GAGGAACTCAAACGAAAAGGAGCCAGTTCAAGAGAAACCAATTCCGGAGTACTTTTTTTTTTTTTTTTGCCATCTTACGTGTTTGTTTAGGGCCTTGACTCAACTCAATA
GTCATAAATGTCAATATTAG

mRNA sequence

Show/hide mRNA sequence

CTTTTTCCTTTTATCTTAAATTCTGTATTTATCCCAATTTTTGTACAAAATAAACATCTTATTCATATTGTCCGACCTTCTATACAAAATTCGATTCCGACTATTTAATT
CAGAGGACAAGAAGGAAGAAAAATCGAGGGATCTTCAAATTCAAAGCTTAAACTGAGAGAGAACACGATCTTAAGGCAGGTCTATAATAGGGAGAGGATAATTTTTCTGG
AGTGGAAGAGGAGAAGAAATTTTGGGATATGAAGGCTCTGTAATACCCGTTCAAACGGTGGTTGAAACGAAGATAATGTCGAAACTTTTTGGGAAAATTGCCGGTTTCTT
CAGCAATAGAACTCTGGTGGGAGTGGACAAAGCGGGAAACAGGTACTTCTTCGTAAAAGAAGAAATCGATGGTATAATGAAAGAGAAGAGATGGGTGGTATTTAAGGGTG
AGGATGATCCAACGTCAATTCCAGTGGAATGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAGAGGAAATGATGGAACTAGAAGCTAGGCGTGAACGT
GTACGACAAAATGTTGCTCTTCTCAAGAAAGAAGAGATGGAAAGAAACTCTAAAGAAGGCAAATTACGGAAAATCATCAGCACTGGTCAAGTTATGGGTCCTGACTTGAA
AAGCTTTATCCGACAGGTCCCAACTGGTTCAGAAGGTGCCCAAGATGTGGAAGGATTGCCTACAAGAGATACCCTGAGGAACTCAAACGAAAAGGAGCCAGTTCAAGAGA
AACCAATTCCGGAGTACTTTTTTTTTTTTTTTTGCCATCTTACGTGTTTGTTTAGGGCCTTGACTCAACTCAATAGTCATAAATGTCAATATTAGATTGCATAGGATTCA
CGTTGACATTAGATACAAGGGATTGTGAAGGTTGGCATATCTTTTACCTTTTCTGAAAAAAAGAAAACAACAAAGTGCCTATTGAATACCAAAAAGTTCCCATTCTTTCA
TATTCAGGTCCTCCGAGCCTGTTGGGTCTGGCCATACATTTAGACCCGGAACATGGCAGCCACCAACATGAATGATGATTGCCCATCAAGGAGAACTCGCCAACACTAAA
GCTAGCAGTTCGTTCTATGTCCAACAATTCAGTAAGCTTCTGCGTTCCGATTACTTACCTCCAAATTTTCCTGAGGACATGCCCTTCTACTTGACTGTATCAGATCCTGC
CCTCCAAAAGTCTCAAACAAGATTGTCACTCTGCATTGCCTTGGTTATTTGTCTGATGAAAAGCAGTTATAACTTAAATTTTATATAGTAAGTTTAATAAGCATCCTTAT
AGAATACTTGTGACAGTTTTGACCTCCCCCATTCTATCTAGAGGCTGAGAAAAGTAACTAGCAATTGTCCGTAGTGGCATTGCCTTGGAAAATTCACTGTGGGATTGATA
TTATTCCTGTTGGTTATGATTTGATTTGTAAAACTTTTTATCCCATATTATTGGAACTCATTGTAATGTTTTCAGGCTCATCTTGAGGGATAAATAATCATGATGCATGC
GATATTTTGTTGTGTGCTCTTGCTACTAAATTTGTGGGGGGTGTAAGGATAGAAGGTGAAGCCTGAGAACATGATGTTAGGGCGTAGGAATAGGATTCATATGTTAGTGT
TTGGATCTTTGAGGATGAGAATTTTGGAGATTTTTATTTCATTTGGCTGTCTAAAATATTATATTTTTGTCCTAAATTGATTAATTGTATAAAGTCTTTTTTCCCTTTAT
GATAGGATTGGGG

Protein sequence

Show/hide protein sequence

MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKI
ISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPEYFFFFFCHLTCLFRALTQLNSHKCQY

IVF0013967 (gene) of Melon (IVF77) v1 genome