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IVF0013990 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013990
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNuclear polyadenylated RNA-binding protein 3-like
Genome locationchr01:16094974..16096030
RNA-Seq ExpressionIVF0013990
SyntenyIVF0013990
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033784.1 nuclear polyadenylated RNA-binding protein 3-like [Cucumis melo var. makuwa]8.19e-128100Show/hide
Query:  MEAVSGSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHN
        MEAVSGSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHN
Subjt:  MEAVSGSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHN

Query:  QAEDGFAYGYDDAEEEDEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        QAEDGFAYGYDDAEEEDEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  QAEDGFAYGYDDAEEEDEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

XP_008448068.1 PREDICTED: uncharacterized protein LOC103490356 [Cucumis melo]3.50e-12495.36Show/hide
Query:  MEAVSGSSSSSS--------MEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSL
        MEAVSGSSSSSS        MEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSL
Subjt:  MEAVSGSSSSSS--------MEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSL

Query:  EDACFLHNQAEDGFAYGYDDAEEEDEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        EDACFLHNQAEDGFAYGYDDAEEEDEVDD+EEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  EDACFLHNQAEDGFAYGYDDAEEEDEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

XP_011658549.2 uncharacterized protein LOC101212092 [Cucumis sativus]2.01e-11695.21Show/hide
Query:  MEAVSGSSSSSS--MEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFL
        MEA+SGSSSSSS  MEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQG N SVDDNVSQDLREMISPVLAVPISLVEDRID SLEDA FL
Subjt:  MEAVSGSSSSSS--MEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFL

Query:  HNQAEDGFAYGYDDAEEEDEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        HNQAEDGFAYGY+DAEEEDEVDDDE DEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  HNQAEDGFAYGYDDAEEEDEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

XP_023553634.1 histone H2A.Z-specific chaperone CHZ1-like [Cucurbita pepo subsp. pepo]7.90e-9476.02Show/hide
Query:  MEAVSG--SSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFL
        MEA+SG  SSSSSS+EF FYDDFEYEFVED+ERLSNWE L+A DADSEM GNGGE++G+N  V   + +DLRE+ISPV+ VPISL EDRI   LED  FL
Subjt:  MEAVSG--SSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFL

Query:  HNQAEDGFAYGYDDAEEE--------DEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
         N AEDGFAYGY+DAEE+        D+ DDD+EDE DLDDELVPWSVSDKLGRQRMRKLGKRGFT+MYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  HNQAEDGFAYGYDDAEEE--------DEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

XP_038886897.1 uncharacterized protein LOC120077100 [Benincasa hispida]2.07e-9883.77Show/hide
Query:  MEAVSGSSSSSSME--FVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFL
        MEA+SGSSSSSS+   FVF DDFEYEFVEDIERLSNWELLDAFDADSEM GNG EEQGEN SVDD V +DLREMI     VPISLVEDRIDGSLED  FL
Subjt:  MEAVSGSSSSSSME--FVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFL

Query:  HNQAEDGFAYGYDDA---EEEDEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
         NQAED FAYGY+D+   EEE+E+D D+ DEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  HNQAEDGFAYGYDDA---EEEDEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

TrEMBL top hitse value%identityAlignment
A0A0A0K4F3 Uncharacterized protein5.8e-9095.21Show/hide
Query:  MEAVSG--SSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFL
        MEA+SG  SSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQG N SVDDNVSQDLREMISPVLAVPISLVEDRID SLEDA FL
Subjt:  MEAVSG--SSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFL

Query:  HNQAEDGFAYGYDDAEEEDEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        HNQAEDGFAYGY+DAEEEDEVDDD EDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  HNQAEDGFAYGYDDAEEEDEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

A0A1S3BJG2 uncharacterized protein LOC1034903561.6e-9595.36Show/hide
Query:  MEAVSG--------SSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSL
        MEAVSG        SSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSL
Subjt:  MEAVSG--------SSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSL

Query:  EDACFLHNQAEDGFAYGYDDAEEEDEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        EDACFLHNQAEDGFAYGYDDAEEEDEVDD+EEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  EDACFLHNQAEDGFAYGYDDAEEEDEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

A0A5A7SRG7 Nuclear polyadenylated RNA-binding protein 3-like3.4e-98100Show/hide
Query:  MEAVSGSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHN
        MEAVSGSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHN
Subjt:  MEAVSGSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHN

Query:  QAEDGFAYGYDDAEEEDEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        QAEDGFAYGYDDAEEEDEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  QAEDGFAYGYDDAEEEDEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

A0A6J1F1D0 NAD-dependent protein deacetylase HST1-like1.6e-6070.15Show/hide
Query:  MEAVSG--SSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGG--------EEQGENYSVDDNVSQDLREMISPVLAVPI-SLVEDRID
        MEA SG  SSSSSS+EFVF+DD EYEFVE++ERLSNWELLDA DAD E+ GNG         EE+GE+ SVD  V +DLR     V+A+PI SLVE+RID
Subjt:  MEAVSG--SSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGG--------EEQGENYSVDDNVSQDLREMISPVLAVPI-SLVEDRID

Query:  GSLEDACFLHNQAEDGFAYGYDDAEE---EDEV--DDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKH
        G  +D   L NQ E+GFAYG +D EE   +D+V  DDD+ DE DLDDELVPWSVSDKLGRQRMRKLGKRGFT+MYNSKRSPFLFTKPGCVRGKHGLGLKH
Subjt:  GSLEDACFLHNQAEDGFAYGYDDAEE---EDEV--DDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKH

Query:  S
        S
Subjt:  S

A0A6J1I004 uncharacterized protein LOC1114684621.2e-7176.02Show/hide
Query:  MEAVSG-----SSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDA
        MEA+SG     SSSSSS+EF FYDDFEYEFVED+ERLSNWE L+A DADSEM GNGGE++G+N  V   + +DL EMISPV+ VPISL EDRI   LED 
Subjt:  MEAVSG-----SSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDA

Query:  CFLHNQAEDGFAYGYDDAEE-----EDEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
         FL N AEDGFAYGY+DAEE     +D  DDD+EDE DLDDELVPWSVSDKLGRQRMRKLGKRGFT+MYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  CFLHNQAEDGFAYGYDDAEE-----EDEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G34630.1 unknown protein3.8e-1762.03Show/hide
Query:  GFAYGYDDAEEEDEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLK
        G  YG D   ++ E D + +D +DLD+ELVP SVS K+GRQRMRKLGKR   K+Y SK SPFL  KPG VRGKHGLG+K
Subjt:  GFAYGYDDAEEEDEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLK

AT5G48420.1 unknown protein1.3e-0639Show/hide
Query:  DRIDGSLEDACFLHNQAEDGFAYGYDDAEEEDEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFT--KPGCVRGKHGLGLK
        DR+DG     C       +   Y   D    D  D DEED+FD  D+L       K+  QR+RK GKR F K    K+  + ++  KPGCV GKHGL +K
Subjt:  DRIDGSLEDACFLHNQAEDGFAYGYDDAEEEDEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFT--KPGCVRGKHGLGLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCCGTTTCTGGATCATCATCTTCTTCTTCTATGGAATTTGTGTTTTATGATGATTTCGAATATGAATTCGTTGAAGACATCGAACGTCTTTCTAACTGGGAGTT
GCTCGATGCTTTTGATGCCGATTCAGAAATGGGCGGAAATGGAGGGGAAGAACAAGGGGAAAATTACAGCGTCGACGATAATGTTTCTCAAGATCTTCGAGAAATGATTT
CTCCCGTTCTCGCAGTGCCGATTTCGCTTGTGGAGGATCGAATCGACGGTTCGTTGGAAGATGCTTGTTTCCTTCACAATCAAGCGGAAGACGGTTTTGCGTATGGTTAT
GACGATGCGGAGGAGGAAGATGAAGTGGATGATGATGAGGAGGATGAGTTCGATTTGGATGATGAACTCGTTCCGTGGTCTGTTAGTGACAAACTCGGACGGCAGAGGAT
GAGGAAATTGGGGAAAAGAGGTTTTACGAAGATGTATAATTCGAAGAGATCTCCGTTTTTGTTCACCAAGCCAGGATGTGTCCGCGGCAAACACGGACTCGGCTTGAAAC
ACAGCTATTAG
mRNA sequenceShow/hide mRNA sequence
AAAAGAAAAGAACGACTGTAAAACCAAAACCACAACCAACAATTTCTCCTCTCGAATCAATTTCTCAAATCGGAGCGATCATGGAGGCCGTTTCTGGATCATCATCTTCT
TCTTCTATGGAATTTGTGTTTTATGATGATTTCGAATATGAATTCGTTGAAGACATCGAACGTCTTTCTAACTGGGAGTTGCTCGATGCTTTTGATGCCGATTCAGAAAT
GGGCGGAAATGGAGGGGAAGAACAAGGGGAAAATTACAGCGTCGACGATAATGTTTCTCAAGATCTTCGAGAAATGATTTCTCCCGTTCTCGCAGTGCCGATTTCGCTTG
TGGAGGATCGAATCGACGGTTCGTTGGAAGATGCTTGTTTCCTTCACAATCAAGCGGAAGACGGTTTTGCGTATGGTTATGACGATGCGGAGGAGGAAGATGAAGTGGAT
GATGATGAGGAGGATGAGTTCGATTTGGATGATGAACTCGTTCCGTGGTCTGTTAGTGACAAACTCGGACGGCAGAGGATGAGGAAATTGGGGAAAAGAGGTTTTACGAA
GATGTATAATTCGAAGAGATCTCCGTTTTTGTTCACCAAGCCAGGATGTGTCCGCGGCAAACACGGACTCGGCTTGAAACACAGCTATTAGAACAAGAACAGATTCATGA
ACTCTGCTTGCCTTAAAAAGGTAATCGACTCTAAGTCCAATTTGGCGTAGAAGTAAATACTAAATAGATGTAATAATTAAATCCTAAAAACTAGTAGTTTCGTTTGTTGT
AAGTAGCAGCAGTATTAGTAATAGTCCCTGTAAATCCAATTTGCCGGGATGGTTTTCTGTTGATTTACAAGGCTTGGATTAAGGAAGAACACATTAACTCAAATTTCATC
TTTGTGAAATTAATCAATCATTTGTCTATATTCTCCTAAGTTATGTCCTCCACGAGAATCGTTATGCTAATTACTATATTCTTTGTTGGATTAGCTGTTTTGTTTGCTAC
ACTCTAAATTCATCTTTTGTGGTTCATGTAATTTGTCACAAAAATCTGGAATCTGGGCCATACCCTC
Protein sequenceShow/hide protein sequence
MEAVSGSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHNQAEDGFAYGY
DDAEEEDEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY