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IVF0014006 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014006
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr11:1872968..1873135
RNA-Seq ExpressionIVF0014006
SyntenyIVF0014006
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032832.1 retrotransposon protein [Cucumis melo var. makuwa]8.25e-2687.27Show/hide
Query:  MTYCEDVDDEDERDSTYATTTTSEDIQYIEIINEWSQWRDVLAESMFTDWQLRNA
        MTYCED+DD DERDSTYATTT SEDI YIEI NEWSQWRD LAESMFTD QLRNA
Subjt:  MTYCEDVDDEDERDSTYATTTTSEDIQYIEIINEWSQWRDVLAESMFTDWQLRNA

KAA0058871.1 retrotransposon protein [Cucumis melo var. makuwa]5.92e-2687.27Show/hide
Query:  MTYCEDVDDEDERDSTYATTTTSEDIQYIEIINEWSQWRDVLAESMFTDWQLRNA
        MTYCEDVDDEDE DSTY TTT SEDIQYIE  NEWSQWRD LAESMFT+WQLRNA
Subjt:  MTYCEDVDDEDERDSTYATTTTSEDIQYIEIINEWSQWRDVLAESMFTDWQLRNA

KAA0062284.1 retrotransposon protein [Cucumis melo var. makuwa]5.92e-2685.45Show/hide
Query:  MTYCEDVDDEDERDSTYATTTTSEDIQYIEIINEWSQWRDVLAESMFTDWQLRNA
        MTYC+D+DDEDE DSTYATTT SEDIQYIE  NEWSQWRD LAESMFT+WQLRNA
Subjt:  MTYCEDVDDEDERDSTYATTTTSEDIQYIEIINEWSQWRDVLAESMFTDWQLRNA

TYK05336.1 retrotransposon protein [Cucumis melo var. makuwa]1.03e-2689.09Show/hide
Query:  MTYCEDVDDEDERDSTYATTTTSEDIQYIEIINEWSQWRDVLAESMFTDWQLRNA
        MTYCEDVDDEDE DSTYATTT SEDIQYIE  NEWSQWRD LAESMFTDWQLRN+
Subjt:  MTYCEDVDDEDERDSTYATTTTSEDIQYIEIINEWSQWRDVLAESMFTDWQLRNA

TYK22655.1 retrotransposon protein [Cucumis melo var. makuwa]3.37e-2583.64Show/hide
Query:  MTYCEDVDDEDERDSTYATTTTSEDIQYIEIINEWSQWRDVLAESMFTDWQLRNA
        MTYC+DVDD DE DS YATTT SEDIQYIE  NEWSQWRD L ESMFTDWQLRNA
Subjt:  MTYCEDVDDEDERDSTYATTTTSEDIQYIEIINEWSQWRDVLAESMFTDWQLRNA

TrEMBL top hitse value%identityAlignment
A0A5A7ST53 Retrotransposon protein2.7e-1989.09Show/hide
Query:  MTYCEDVDDEDERDSTYATTTTSEDIQYIEIINEWSQWRDVLAESMFTDWQLRNA
        MTYCEDVDDEDE DSTYATTT SEDIQYIE  NEWSQWRD LAESMFTDWQLRN+
Subjt:  MTYCEDVDDEDERDSTYATTTTSEDIQYIEIINEWSQWRDVLAESMFTDWQLRNA

A0A5A7SZH3 Retrotransposon protein7.8e-1987.27Show/hide
Query:  MTYCEDVDDEDERDSTYATTTTSEDIQYIEIINEWSQWRDVLAESMFTDWQLRNA
        MTYCEDVDDED+ DSTYATTT SEDIQYIE  NEWSQWRD LAESMFT+WQLRNA
Subjt:  MTYCEDVDDEDERDSTYATTTTSEDIQYIEIINEWSQWRDVLAESMFTDWQLRNA

A0A5A7VL61 Retrotransposon protein7.8e-1987.27Show/hide
Query:  MTYCEDVDDEDERDSTYATTTTSEDIQYIEIINEWSQWRDVLAESMFTDWQLRNA
        MTYC+DV+DEDE DSTYATTTTSEDIQYIE  NEWSQW D LAESMFTDWQLRNA
Subjt:  MTYCEDVDDEDERDSTYATTTTSEDIQYIEIINEWSQWRDVLAESMFTDWQLRNA

A0A5D3C4P9 Retrotransposon protein2.7e-1989.09Show/hide
Query:  MTYCEDVDDEDERDSTYATTTTSEDIQYIEIINEWSQWRDVLAESMFTDWQLRNA
        MTYCEDVDDEDE DSTYATTT SEDIQYIE  NEWSQWRD LAESMFTDWQLRN+
Subjt:  MTYCEDVDDEDERDSTYATTTTSEDIQYIEIINEWSQWRDVLAESMFTDWQLRNA

A0A5D3E2V3 Retrotransposon protein7.8e-1987.27Show/hide
Query:  MTYCEDVDDEDERDSTYATTTTSEDIQYIEIINEWSQWRDVLAESMFTDWQLRNA
        MTYCEDVDDEDERDSTY TTT S+DIQYIE  NEWSQWRD LAESMFTDWQLR A
Subjt:  MTYCEDVDDEDERDSTYATTTTSEDIQYIEIINEWSQWRDVLAESMFTDWQLRNA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGCGAGGACGTTGACGACGAGGACGAGAGGGACTCCACGTACGCGACGACCACCACTTCAGAAGACATTCAGTACATTGAGATAATAAACGAGTGGTCTCA
GTGGCGCGACGTCCTAGCCGAATCGATGTTCACCGATTGGCAGTTGCGTAACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGCGAGGACGTTGACGACGAGGACGAGAGGGACTCCACGTACGCGACGACCACCACTTCAGAAGACATTCAGTACATTGAGATAATAAACGAGTGGTCTCA
GTGGCGCGACGTCCTAGCCGAATCGATGTTCACCGATTGGCAGTTGCGTAACGCTTAG
Protein sequenceShow/hide protein sequence
MTYCEDVDDEDERDSTYATTTTSEDIQYIEIINEWSQWRDVLAESMFTDWQLRNA