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IVF0014024 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014024
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPseudouridylate synthase 7-like protein isoform X1
Genome locationchr02:17069878..17072789
RNA-Seq ExpressionIVF0014024
SyntenyIVF0014024
Gene Ontology termsGO:0001522 - pseudouridine synthesis (biological process)
GO:0008033 - tRNA processing (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0009982 - pseudouridine synthase activity (molecular function)
InterPro domainsIPR001656 - Pseudouridine synthase, TruD
IPR020103 - Pseudouridine synthase, catalytic domain superfamily
IPR042214 - Pseudouridine synthase, TruD, catalytic domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062573.1 pseudouridylate synthase 7-like protein isoform X1 [Cucumis melo var. makuwa]1.15e-81100Show/hide
Query:  LTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEY
        LTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEY
Subjt:  LTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEY

Query:  GQGTPDPQMALKLSFTLPASSYATMAIRELLKTSTS
        GQGTPDPQMALKLSFTLPASSYATMAIRELLKTSTS
Subjt:  GQGTPDPQMALKLSFTLPASSYATMAIRELLKTSTS

KAE8653626.1 hypothetical protein Csa_007629 [Cucumis sativus]6.09e-7675.28Show/hide
Query:  KEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEYGQGTPDPQ
        +EFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLH LLKSQSV ISKEEKIA+KSK EDSLDSTDQSVCCKK+IQLEAGG E E GQGT DPQ
Subjt:  KEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEYGQGTPDPQ

Query:  MALKLSFTLPASSYATMAIRELLKTSTS-------------------------------NTRIFIVSQSVVSVWTNSV
        MALKLSFTLPASSYATMAIRELLKTSTS                               NT+IF+VSQS VSVWTNSV
Subjt:  MALKLSFTLPASSYATMAIRELLKTSTS-------------------------------NTRIFIVSQSVVSVWTNSV

TYK28798.1 pseudouridylate synthase 7-like protein isoform X2 [Cucumis melo var. makuwa]2.78e-77100Show/hide
Query:  MTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEYGQGTPDPQMALKLSF
        MTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEYGQGTPDPQMALKLSF
Subjt:  MTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEYGQGTPDPQMALKLSF

Query:  TLPASSYATMAIRELLKTSTS
        TLPASSYATMAIRELLKTSTS
Subjt:  TLPASSYATMAIRELLKTSTS

XP_008462716.1 PREDICTED: pseudouridylate synthase 7 homolog isoform X1 [Cucumis melo]3.68e-8099.26Show/hide
Query:  LTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEY
        LTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSV ISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEY
Subjt:  LTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEY

Query:  GQGTPDPQMALKLSFTLPASSYATMAIRELLKTSTS
        GQGTPDPQMALKLSFTLPASSYATMAIRELLKTSTS
Subjt:  GQGTPDPQMALKLSFTLPASSYATMAIRELLKTSTS

XP_008462718.1 PREDICTED: pseudouridylate synthase 7 homolog isoform X2 [Cucumis melo]2.02e-8099.26Show/hide
Query:  LTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEY
        LTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSV ISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEY
Subjt:  LTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEY

Query:  GQGTPDPQMALKLSFTLPASSYATMAIRELLKTSTS
        GQGTPDPQMALKLSFTLPASSYATMAIRELLKTSTS
Subjt:  GQGTPDPQMALKLSFTLPASSYATMAIRELLKTSTS

TrEMBL top hitse value%identityAlignment
A0A0A0LYD2 Uncharacterized protein1.3e-6874.63Show/hide
Query:  KLFTPPIYLFFSCGPILTILTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQ
        +LFTPPIY FFS   I   LT SVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLH LLKSQSV ISKEEKIA+KSK EDSLDSTDQ
Subjt:  KLFTPPIYLFFSCGPILTILTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQ

Query:  SVCCKKDIQLEAGGNETEYGQGTPDPQMALKLSFTLPASSYATMAIRELLKTSTS-------------------------------NTRIFIVSQSVVSV
        SVCCKK+IQLEAGG E E GQGT DPQMALKLSFTLPASSYATMAIRELLKTSTS                               NT+IF+VSQS VSV
Subjt:  SVCCKKDIQLEAGGNETEYGQGTPDPQMALKLSFTLPASSYATMAIRELLKTSTS-------------------------------NTRIFIVSQSVVSV

Query:  WTNSV
        WTNSV
Subjt:  WTNSV

A0A1S3CHJ1 pseudouridylate synthase 7 homolog isoform X11.2e-6699.26Show/hide
Query:  LTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEY
        LTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSV ISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEY
Subjt:  LTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEY

Query:  GQGTPDPQMALKLSFTLPASSYATMAIRELLKTSTS
        GQGTPDPQMALKLSFTLPASSYATMAIRELLKTSTS
Subjt:  GQGTPDPQMALKLSFTLPASSYATMAIRELLKTSTS

A0A1S3CI40 pseudouridylate synthase 7 homolog isoform X21.2e-6699.26Show/hide
Query:  LTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEY
        LTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSV ISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEY
Subjt:  LTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEY

Query:  GQGTPDPQMALKLSFTLPASSYATMAIRELLKTSTS
        GQGTPDPQMALKLSFTLPASSYATMAIRELLKTSTS
Subjt:  GQGTPDPQMALKLSFTLPASSYATMAIRELLKTSTS

A0A5A7V3D9 Pseudouridylate synthase 7-like protein isoform X11.4e-67100Show/hide
Query:  LTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEY
        LTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEY
Subjt:  LTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEY

Query:  GQGTPDPQMALKLSFTLPASSYATMAIRELLKTSTS
        GQGTPDPQMALKLSFTLPASSYATMAIRELLKTSTS
Subjt:  GQGTPDPQMALKLSFTLPASSYATMAIRELLKTSTS

A0A5D3DZA9 Pseudouridylate synthase 7-like protein isoform X26.9e-59100Show/hide
Query:  MTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEYGQGTPDPQMALKLSF
        MTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEYGQGTPDPQMALKLSF
Subjt:  MTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEYGQGTPDPQMALKLSF

Query:  TLPASSYATMAIRELLKTSTS
        TLPASSYATMAIRELLKTSTS
Subjt:  TLPASSYATMAIRELLKTSTS

SwissProt top hitse value%identityAlignment
Q08647 Multisubstrate pseudouridine synthase 71.2e-0431.97Show/hide
Query:  SMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEYGQGTPDPQMALKLS
        S+ GSYR V Q+PK  E+ +I Y D +  L  +DL  L  +++       K + +  ++  LD              + GG +T           A+ L 
Subjt:  SMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEYGQGTPDPQMALKLS

Query:  FTLPASSYATMAIRELLKTSTS
        F L  S+YATMA+REL+K  TS
Subjt:  FTLPASSYATMAIRELLKTSTS

Q08DI8 Pseudouridylate synthase 7 homolog1.7e-0629.01Show/hide
Query:  HNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEYGQGTP
        H ++++   S++G+YR++  RP++  WE+++Y D  +PL  +D+                        D+L+     V            +E +Y     
Subjt:  HNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEYGQGTP

Query:  DPQMALKLSFTLPASSYATMAIRELLKTSTS
            ALK+ F+LP S+YATMAIRE+LK  TS
Subjt:  DPQMALKLSFTLPASSYATMAIRELLKTSTS

Q91VU7 Pseudouridylate synthase 7 homolog1.0e-0629.77Show/hide
Query:  HNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEYGQGTP
        H ++++   S++G+YRR+  RP+   WE+++Y D  +PL  +D+                        D+L+     V            +E +Y     
Subjt:  HNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEYGQGTP

Query:  DPQMALKLSFTLPASSYATMAIRELLKTSTS
            ALK+ F+LP S+YATMAIRE+LK  TS
Subjt:  DPQMALKLSFTLPASSYATMAIRELLKTSTS

Q96PZ0 Pseudouridylate synthase 7 homolog1.7e-0629.01Show/hide
Query:  HNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEYGQGTP
        H ++++   S++G+YR++  RP++  WE+++Y D  +PL  +D+                        D+L+     V            +E +Y     
Subjt:  HNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAGGNETEYGQGTP

Query:  DPQMALKLSFTLPASSYATMAIRELLKTSTS
            ALK+ F+LP S+YATMAIRE+LK  TS
Subjt:  DPQMALKLSFTLPASSYATMAIRELLKTSTS

Arabidopsis top hitse value%identityAlignment
AT3G04820.1 Pseudouridine synthase family protein2.3e-3052.48Show/hide
Query:  LTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQL--EAGGNET
        LTES+H VKEFSITSMTG YRRVFQ+P D+EWEL++Y D N PLA++DL ++  ++ V     EK+ +  +IED    +D +     +  L  +   NE 
Subjt:  LTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDSTDQSVCCKKDIQL--EAGGNET

Query:  EYGQGTPD---PQMALKLSFTLPASSYATMAIRELLKTSTS
        E   G PD    QMALK++ TLP+S YATMAIRELLKTSTS
Subjt:  EYGQGTPD---PQMALKLSFTLPASSYATMAIRELLKTSTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATATTGGAGGTCTAACAAACAACTGAGCCGAACCAAACTGTTTACGCCACCAATCTATCTATTTTTCTCTTGTGGACCTATTTTAACTATCTTGACGGAGTCTGT
ACATAATGTAAAGGAATTTTCGATTACCAGTATGACTGGAAGCTATCGGAGAGTTTTCCAAAGACCAAAGGACTACGAGTGGGAATTGATCTCATATGTTGATCGTAATT
TACCTCTGGCACAGAGTGATTTACATAAGCTTTTGAAGTCTCAAAGTGTTGGAATTAGTAAGGAAGAAAAGATAGCCAATAAATCTAAAATTGAAGATTCATTGGATTCC
ACAGATCAATCAGTGTGCTGTAAAAAGGATATTCAACTTGAAGCAGGTGGAAATGAAACTGAATATGGGCAAGGCACTCCGGATCCTCAGATGGCTCTCAAGCTGAGCTT
TACTCTCCCGGCTTCTTCTTATGCTACGATGGCAATTAGAGAATTGCTGAAAACATCAACTTCTAACACAAGAATCTTTATAGTGAGCCAATCTGTTGTTTCAGTTTGGA
CCAATTCCGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAATATTGGAGGTCTAACAAACAACTGAGCCGAACCAAACTGTTTACGCCACCAATCTATCTATTTTTCTCTTGTGGACCTATTTTAACTATCTTGACGGAGTCTGT
ACATAATGTAAAGGAATTTTCGATTACCAGTATGACTGGAAGCTATCGGAGAGTTTTCCAAAGACCAAAGGACTACGAGTGGGAATTGATCTCATATGTTGATCGTAATT
TACCTCTGGCACAGAGTGATTTACATAAGCTTTTGAAGTCTCAAAGTGTTGGAATTAGTAAGGAAGAAAAGATAGCCAATAAATCTAAAATTGAAGATTCATTGGATTCC
ACAGATCAATCAGTGTGCTGTAAAAAGGATATTCAACTTGAAGCAGGTGGAAATGAAACTGAATATGGGCAAGGCACTCCGGATCCTCAGATGGCTCTCAAGCTGAGCTT
TACTCTCCCGGCTTCTTCTTATGCTACGATGGCAATTAGAGAATTGCTGAAAACATCAACTTCTAACACAAGAATCTTTATAGTGAGCCAATCTGTTGTTTCAGTTTGGA
CCAATTCCGTTTGA
Protein sequenceShow/hide protein sequence
MQYWRSNKQLSRTKLFTPPIYLFFSCGPILTILTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVGISKEEKIANKSKIEDSLDS
TDQSVCCKKDIQLEAGGNETEYGQGTPDPQMALKLSFTLPASSYATMAIRELLKTSTSNTRIFIVSQSVVSVWTNSV