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IVF0014038 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014038
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionprotein LATE FLOWERING-like
Genome locationchr04:11215098..11215634
RNA-Seq ExpressionIVF0014038
SyntenyIVF0014038
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066236.1 protein LATE FLOWERING-like [Cucumis melo var. makuwa]2.42e-108100Show/hide
Query:  MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHCFPNNQQLLY
        MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHCFPNNQQLLY
Subjt:  MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHCFPNNQQLLY

Query:  ENMVFCGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL
        ENMVFCGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL
Subjt:  ENMVFCGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL

KAE8650843.1 hypothetical protein Csa_017433, partial [Cucumis sativus]2.28e-7795.16Show/hide
Query:  MEYEESLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAG
        MEYEESLSKVVEIETN+N+IVEKV+EMEE PSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPF APTSLVFAASQQQHHP G
Subjt:  MEYEESLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAG

Query:  LLPHPVYIATHGANLHCFPNNQQL
        LLPHPVYIATHGANLHCFPNNQQL
Subjt:  LLPHPVYIATHGANLHCFPNNQQL

XP_008447640.1 PREDICTED: protein LATE FLOWERING-like [Cucumis melo]3.01e-126100Show/hide
Query:  MEYEESLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAG
        MEYEESLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAG
Subjt:  MEYEESLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAG

Query:  LLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL
        LLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL
Subjt:  LLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL

XP_031739318.1 protein LATE FLOWERING [Cucumis sativus]1.23e-11895.51Show/hide
Query:  MEYEESLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAG
        MEYEESLSKVVEIETN+N+IVEKV+EMEE PSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPF APTSLVFAASQQQHHP G
Subjt:  MEYEESLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAG

Query:  LLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL
        LLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVC SNRYHQDEENLLNWERNIK DLSRINHDKEKEQKLDLSLHL
Subjt:  LLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL

XP_038888938.1 protein LATE FLOWERING [Benincasa hispida]9.06e-9882.61Show/hide
Query:  MEYEESLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSV---SPPSPFSAPTSLVFAASQQQHH
        MEYEE LS+V E  TNNN     ++EMEETP+RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI DYS    SPPSPF AP SLVF AS QQHH
Subjt:  MEYEESLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSV---SPPSPFSAPTSLVFAASQQQHH

Query:  PAGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQ---DEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL
        P GLLP PVYIATHG NLHCFPNNQQLLYENMV+CGGVC+SNRYHQ   DEENLLNWER+IK DLSRINHDKEKEQKLDLSLHL
Subjt:  PAGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQ---DEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL

TrEMBL top hitse value%identityAlignment
A0A0A0LE19 C2H2-type domain-containing protein7.5e-7996.71Show/hide
Query:  MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHCFPNNQQLLY
        MEE PSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPF APTSLVFAASQQQHHP GLLPHPVYIATHGANLHCFPNNQQLLY
Subjt:  MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHCFPNNQQLLY

Query:  ENMVFCGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL
        ENMVFCGGVC SNRYHQDEENLLNWERNIK DLSRINHDKEKEQKLDLSLHL
Subjt:  ENMVFCGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL

A0A1S3BIU8 protein LATE FLOWERING-like6.1e-97100Show/hide
Query:  MEYEESLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAG
        MEYEESLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAG
Subjt:  MEYEESLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAG

Query:  LLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL
        LLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL
Subjt:  LLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL

A0A5A7VIQ7 Protein LATE FLOWERING-like3.8e-83100Show/hide
Query:  MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHCFPNNQQLLY
        MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHCFPNNQQLLY
Subjt:  MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHCFPNNQQLLY

Query:  ENMVFCGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL
        ENMVFCGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL
Subjt:  ENMVFCGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL

A0A6J1ETH7 protein LATE FLOWERING6.6e-5161.9Show/hide
Query:  MEYEESLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAG
        ME EE   +V E  +         +EMEETPSR+FPCLFCSRKFQ+SQALGGHQNAHKKERTA RKAKR+ DYS S  S  S+    VFA +QQ HHPA 
Subjt:  MEYEESLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAG

Query:  LLPHPVYIATHGANLHCFPNNQQLLY---------ENMVFCGGVCSSNRYH--QDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL
        +LPHPVYIA HGANLHCFPNNQQ+ Y         E+MV+ GGVCS NRY   +DE+++LNW+R+IK        DKEKEQKLDLSLHL
Subjt:  LLPHPVYIATHGANLHCFPNNQQLLY---------ENMVFCGGVCSSNRYH--QDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL

A0A6J1HVN7 protein LATE FLOWERING-like6.6e-5169.38Show/hide
Query:  MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVS-PPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHCFPNNQQLL
        MEE PSR+FPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI DY+ S  PSP S+ +S VFAA+  Q H  GL PHP+YIA + ANLHCFPNN  L 
Subjt:  MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVS-PPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHCFPNNQQLL

Query:  YENMVFCGGVCSSNRYH-------QDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL
        YE+M + GGVCSSNRYH       +DE+N+LNW+RNIKN       DK+KEQKLDLSLHL
Subjt:  YENMVFCGGVCSSNRYH-------QDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL

SwissProt top hitse value%identityAlignment
Q39261 Zinc finger protein 28.7e-0844.44Show/hide
Query:  SLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYS----VSPPSPFS
        S+S      TN++  +E+         RVF C +C RKF SSQALGGHQNAHK ERT A+K++ +   S       P PFS
Subjt:  SLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYS----VSPPSPFS

Q39262 Zinc finger protein 33.0e-0838.96Show/hide
Query:  TPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPV
        T  ++F C +C R F SSQALGGHQNAHK+ERT A++ +R+   + +   P+   + L F      H   G+  H +
Subjt:  TPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPV

Q39263 Zinc finger protein 41.3e-0860.42Show/hide
Query:  EMEETPS---RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI
        + ++ PS   RVF C +C RKF SSQALGGHQNAHK+ERT A++A R+
Subjt:  EMEETPS---RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI

Q9FFX4 Zinc finger protein KNUCKLES5.1e-0873.53Show/hide
Query:  RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARK
        R+FPC +C RKF +SQALGGHQNAHK+ER AAR+
Subjt:  RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARK

Q9FKA9 Protein LATE FLOWERING2.4e-1841.82Show/hide
Query:  EETPS-RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHCFPNNQQLLY
        E T S R+FPCLFCSRKF SSQALGGHQNAHKKERTAAR+AKR  D+  +     + P   VF +S  QHH   +L +P       A++ CFP       
Subjt:  EETPS-RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHCFPNNQQLLY

Query:  ENMVF-------------CGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL
        ++ +F              G  C      Q   ++L+   N+      +N DK K+Q LDLSLHL
Subjt:  ENMVF-------------CGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL

Arabidopsis top hitse value%identityAlignment
AT1G66140.1 zinc finger protein 49.5e-1060.42Show/hide
Query:  EMEETPS---RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI
        + ++ PS   RVF C +C RKF SSQALGGHQNAHK+ERT A++A R+
Subjt:  EMEETPS---RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI

AT5G01860.1 C2H2 and C2HC zinc fingers superfamily protein1.6e-0949.23Show/hide
Query:  ETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI-------CDYSVSPPSPFSAPTS
        E  +RVF C FC ++F +SQALGGHQNAHK+ER+ A++ K I         YS  PPS  S  +S
Subjt:  ETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI-------CDYSVSPPSPFSAPTS

AT5G14010.1 C2H2 and C2HC zinc fingers superfamily protein3.6e-0973.53Show/hide
Query:  RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARK
        R+FPC +C RKF +SQALGGHQNAHK+ER AAR+
Subjt:  RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARK

AT5G25160.1 zinc finger protein 32.1e-0938.96Show/hide
Query:  TPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPV
        T  ++F C +C R F SSQALGGHQNAHK+ERT A++ +R+   + +   P+   + L F      H   G+  H +
Subjt:  TPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPV

AT5G48890.1 C2H2-like zinc finger protein1.7e-1941.82Show/hide
Query:  EETPS-RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHCFPNNQQLLY
        E T S R+FPCLFCSRKF SSQALGGHQNAHKKERTAAR+AKR  D+  +     + P   VF +S  QHH   +L +P       A++ CFP       
Subjt:  EETPS-RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHCFPNNQQLLY

Query:  ENMVF-------------CGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL
        ++ +F              G  C      Q   ++L+   N+      +N DK K+Q LDLSLHL
Subjt:  ENMVF-------------CGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATATGAAGAAAGCCTTTCAAAAGTAGTTGAAATTGAAACCAACAACAACGATATTGTTGAAAAAGTACTTGAAATGGAAGAAACCCCATCAAGAGTTTTCCCTTG
TTTGTTCTGTTCAAGAAAGTTTCAAAGCTCCCAAGCTTTAGGAGGCCATCAAAATGCTCATAAGAAAGAGAGGACTGCCGCGAGGAAAGCCAAGCGAATCTGCGATTACT
CAGTGTCGCCACCATCGCCGTTCTCGGCACCGACATCGTTGGTTTTTGCAGCTAGCCAGCAGCAACATCATCCAGCTGGGTTATTGCCACATCCTGTTTATATTGCTACT
CATGGAGCTAATCTTCATTGTTTCCCTAATAACCAACAATTGTTGTATGAAAACATGGTTTTTTGTGGTGGGGTTTGTTCAAGCAATAGATATCATCAAGATGAAGAAAA
TTTGTTGAATTGGGAGAGAAACATAAAGAACGATCTTAGTAGGATAAACCATGATAAGGAAAAAGAGCAAAAACTTGATCTTTCTCTCCATTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATATGAAGAAAGCCTTTCAAAAGTAGTTGAAATTGAAACCAACAACAACGATATTGTTGAAAAAGTACTTGAAATGGAAGAAACCCCATCAAGAGTTTTCCCTTG
TTTGTTCTGTTCAAGAAAGTTTCAAAGCTCCCAAGCTTTAGGAGGCCATCAAAATGCTCATAAGAAAGAGAGGACTGCCGCGAGGAAAGCCAAGCGAATCTGCGATTACT
CAGTGTCGCCACCATCGCCGTTCTCGGCACCGACATCGTTGGTTTTTGCAGCTAGCCAGCAGCAACATCATCCAGCTGGGTTATTGCCACATCCTGTTTATATTGCTACT
CATGGAGCTAATCTTCATTGTTTCCCTAATAACCAACAATTGTTGTATGAAAACATGGTTTTTTGTGGTGGGGTTTGTTCAAGCAATAGATATCATCAAGATGAAGAAAA
TTTGTTGAATTGGGAGAGAAACATAAAGAACGATCTTAGTAGGATAAACCATGATAAGGAAAAAGAGCAAAAACTTGATCTTTCTCTCCATTTATAG
Protein sequenceShow/hide protein sequence
MEYEESLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIAT
HGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL