CuGenDBv2

Gene ID	IVF0014045
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	ATP synthase subunit c, chloroplastic
Genome location	chr11:12480930..12481175
RNA-Seq Expression	IVF0014045
Synteny	IVF0014045
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component) GO:0008289 - lipid binding (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domains	IPR000454 - ATP synthase, F0 complex, subunit C IPR002379 - V-ATPase proteolipid subunit C-like domain IPR005953 - ATP synthase, F0 complex, subunit C, bacterial/chloroplast IPR035921 - F/V-ATP synthase subunit C superfamily IPR038662 - F1F0 ATP synthase subunit C superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

TYK11914.1 ATP synthase CF0 C subunit [Cucumis melo var. makuwa]

5.70e-42

100

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Query:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
        MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
Subjt:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV

YP_002149738.1 ATP synthase CF0 subunit III [Cicer arietinum]

1.30e-38

92.59

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Query:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
        MNP+ISA SVIAAGLAVGLASIGPGIGQGTAAGQA+EGIARQ E E+KIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
Subjt:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV

YP_002456460.1 ATP synthase CF0 subunit III [Trifolium subterraneum]

9.12e-39

92.59

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Query:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
        MNPLISA SVIAAGLAVGLASIGPG+GQGTAAGQA+EGIARQ E E+KIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
Subjt:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV

YP_009389858.1 ATP synthase CF0 subunit III [Caragana kozlowii]

1.84e-38

91.36

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Query:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
        MNP+ISA SVIAAGLAVGLASIGPG+GQGTAAGQA+EGIARQ E E+KIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
Subjt:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV

YP_009437896.1 ATP synthase CF0 subunit III [Tibetia liangshanensis]

6.42e-39

93.83

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Query:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
        MNPLISA SVIAAGLAVGLASIGPGIGQGTAAGQA+EGIARQ E E+KIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
Subjt:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV

TrEMBL top hits

e value

%identity

Alignment

A0A0K0LUH5 ATP synthase F0 sector subunit C

2.7e-28

93.83

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Query:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
        MNPLISA SVIAAGLAVGLASIGPGIGQGTAAGQA+EGIARQ E E+KIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
Subjt:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV

A0A4P8F4N7 ATP synthase F0 sector subunit C

2.7e-28

93.83

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Query:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
        MNPLISA SVIAAGLAVGLASIGPGIGQGTAAGQA+EGIARQ E E+KIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
Subjt:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV

A0A5D3CL66 ATP synthase F0 sector subunit C

1.3e-30

100

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Query:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
        MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
Subjt:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV

A0A7L8XNH5 ATP synthase subunit c, chloroplastic

2.7e-28

93.83

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Query:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
        MNPLISA SVIAAGLAVGLASIGPGIGQGTAAGQA+EGIARQ E E+KIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
Subjt:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV

A0A7T8ZSE8 AtpH

2.7e-28

93.83

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Query:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
        MNPLISA SVIAAGLAVGLASIGPGIGQGTAAGQA+EGIARQ E E+KIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
Subjt:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV

SwissProt top hits

e value

%identity

Alignment

B0Z4N0 ATP synthase subunit c, chloroplastic

2.2e-30

93.83

Show/hide

Query:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
        MNPLISA SVIAAGLAVGLASIGPGIGQGTAAGQA+EGIARQ E E KIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
Subjt:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV

B0Z4W4 ATP synthase subunit c, chloroplastic

2.2e-30

93.83

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Query:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
        MNPLISA SVIAAGLAVGLASIGPGIGQGTAAGQA+EGIARQ E E KIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
Subjt:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV

B5LMM9 ATP synthase subunit c, chloroplastic

1.3e-30

92.59

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Query:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
        MNP+ISA SVIAAGLAVGLASIGPGIGQGTAAGQA+EGIARQ E E+KIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
Subjt:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV

P62481 ATP synthase subunit c, chloroplastic

2.2e-30

93.83

Show/hide

Query:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
        MNPLISA SVIAAGLAVGLASIGPGIGQGTAAGQA+EGIARQ E E KIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
Subjt:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV

Q6WQW2 ATP synthase subunit c, chloroplastic

2.2e-30

93.83

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Query:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
        MNPLISA SVIAAGLAVGLASIGPGIGQGTAAGQA+EGIARQ E E KIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
Subjt:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV

Arabidopsis top hits

e value

%identity

Alignment

ATCG00140.1 ATP synthase subunit C family protein

2.6e-31

91.36

Show/hide

Query:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
        MNPL+SA SVIAAGLAVGLASIGPG+GQGTAAGQA+EGIARQ E E KIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
Subjt:  MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV

Sequences

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CDS sequence

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ATGAATCCACTAATTTCTGCCACTTCCGTTATTGCTGCTGGATTGGCCGTCGGGCTTGCTTCTATTGGACCTGGGATTGGTCAAGGTACTGCTGCGGGCCAAGCTATAGA
AGGGATCGCGAGACAACTCGAGGTGGAGGAAAAAATCCGAGGTACTTTATTGCTTAGTCTGGCTTTTATGGAAGCTTTAACAATTTATGGGTTGGTTGTAGCATTAGCAC
TTTTATTTGCGAATCCTTTTGTTTAA

mRNA sequence

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Protein sequence

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MNPLISATSVIAAGLAVGLASIGPGIGQGTAAGQAIEGIARQLEVEEKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV

IVF0014045 (gene) of Melon (IVF77) v1 genome